Steffen Möller pushed to branch master at Debian Blends Team / med
Commits:
26035fed by Steffen Möller at 2020-07-07T15:04:20+00:00
Update bio - some merging with the covid-19 task list
- - - - -
1 changed file:
- tasks/bio
Changes:
=
tasks/bio
=
@@ -449,6 +449,10 @@ Suggests: baitfisher
Suggests: bandage
+Suggests: bbmap
+
+Suggests: bcalm
+
Suggests: beagle
Suggests: bedops
@@ -625,6 +629,8 @@ Suggests: emmax
Suggests: ensembl-vep
+Suggests: epigrass
+
Suggests: examl, raxml-ng
Suggests: exabayes
@@ -914,8 +920,6 @@ Recommends: optitype
Recommends: paipline
-Recommends: python3-pairtools
-
Recommends: pal2nal
Recommends: paleomix
@@ -1031,29 +1035,45 @@ Recommends: pssh2
Recommends: pufferfish
+Recommends: pycorrfit
+
+Recommends: pyscanfcs
+
Suggests: python3-alignlib
Recommends: python3-cogent
-Recommends: pycorrfit
+Suggests: python3-cgecore
-Recommends: pyscanfcs
+Suggests: python3-cyvcf2
-Recommends: python3-deeptools, python3-deeptoolsintervals
+Suggests: python3-deeptools, python3-deeptoolsintervals
Recommends: python3-geneimpacts
Recommends: python3-gffutils
+Suggests: Python3-htseq
+
Suggests: python3-loompy
-Recommends: python3-pybel
+Suggests: python3-nanomath
+
+Recommends: python3-pairtools
+
+Recommends: python3-pybedtools
+
+Suggests: python3-pybel
Suggests: python3-pychopper
+Suggests: python3-pyfaidx
+
+Suggests: python3-pyflow
+
Suggests: python3-py2bit
-Recommends: python3-pybedtools
+Suggests: python3-pysam
Recommends: python3-sqt
@@ -,6 +1131,8 @@ Suggests: r-cran-dynamictreecut
Recommends: r-bioc-ebseq
+Suggests: r-cran-epir
+
Suggests: r-cran-forecast
Suggests: r-cran-gprofiler
@@ -1466,8 +1488,6 @@ Recommends: r-cran-tcr, r-cran-tigger, r-cran-alakazam,
r-cran-shazam, igor, r-c
Recommends: ncbi-igblast
-Suggests: python3-pyflow
-
Recommends: pigx-rnaseq, pigx-scrnaseq
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View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/26035fed5503e0529a0db0f406801059ee11b5f9
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