[Blends-commit] [Git][blends-team/med][master] Re-render after removal of non-existing filo and python3-bd2k
Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
081c6dc7 by Andreas Tille at 2018-04-13T11:48:11+02:00
Re-render after removal of non-existing filo and python3-bd2k
- - - - -
2 changed files:
- Makefile
- debian/control
Changes:
=
Makefile
=
--- a/Makefile
+++ b/Makefile
@@ -1,5 +1,20 @@
#!/usr/bin/make -f
+export GENCONTROLOPTS = "--udd"
+
+export GENCONTROL_OPTS = "--udd"
+
+testopts:
+ echo ${GENCONTROLOPTS}
+ if [ "$$GENCONTROLOPTS" != "" ] ; then \
+ echo "GENCONTROLOPTS = ${GENCONTROLOPTS} ( $(GENCONTROLOPTS) )" ; \
+ fi
+ echo "Now test the underscore variable"
+ echo ${GENCONTROL_OPTS}
+ if [ "$$GENCONTROL_OPTS" != "" ] ; then \
+ echo "GENCONTROL_OPTS = ${GENCONTROL_OPTS} ( $(GENCONTROL_OPTS) )"
; \
+ fi
+
BLENDMAKEFILE=/usr/share/blends-dev/Makefile
CheckBLENDMakefile := $(shell if [ -e $(BLENDMAKEFILE) ] ; then echo 1 ; else
echo 0 ; fi)
=
debian/control
=
--- a/debian/control
+++ b/debian/control
@@ -201,7 +201,6 @@ Recommends: abacas,
fastx-toolkit,
ffindex,
figtree,
-filo,
fitgcp,
flexbar,
fml-asm,
@@ -934,7 +933,6 @@ Suggests: bioclipse,
python-pyflow,
python-roadrunner,
python-screed,
- python3-bd2k,
python3-biopython-sql | python-biopython-sql,
python3-bx | python-bx,
python3-consensuscore2 | python-consensuscore2,
@@ -1034,7 +1032,6 @@ Recommends: abyss,
fastqc,
fasttree,
fastx-toolkit,
-filo,
fitgcp,
flexbar,
freecontact,
View it on GitLab:
https://salsa.debian.org/blends-team/med/commit/081c6dc7519cb10870bfee5667905c5915b0ce6c
---
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[Blends-commit] [Git][blends-team/website][master] Debichem was moved to Salsa
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 17166520 by Andreas Tille at 2018-04-13T16:52:51+02:00 Debichem was moved to Salsa - - - - - 1 changed file: - webtools/webconf/debichem.conf View it on GitLab: https://salsa.debian.org/blends-team/website/commit/17166520b3b2c842613b017efe0dfbc49230befb --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/17166520b3b2c842613b017efe0dfbc49230befb You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] Filo is now provided by bedtools
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 15d5bb83 by Andreas Tille at 2018-04-12T13:48:47+02:00 Filo is now provided by bedtools - - - - - 2 changed files: - tasks/bio - tasks/cloud Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -214,7 +214,7 @@ Recommends: theseus Recommends: staden-io-lib-utils -Recommends: samtools, bedtools, filo, datamash +Recommends: samtools, bedtools, datamash Recommends: gassst = tasks/cloud = --- a/tasks/cloud +++ b/tasks/cloud @@ -65,6 +65,6 @@ X-End-Category: Tools for the molecular biologist. X-Begin-Category: Others Recommends: aevol, python3-biomaj3-cli, bioperl, bioperl-run, cain, -clonalframe, circos, datamash, filo, prodigal, +clonalframe, circos, datamash, prodigal, python-biopython, python3-biopython, qiime, r-cran-pvclust, r-cran-vegan View it on GitLab: https://salsa.debian.org/blends-team/med/commit/15d5bb830178ce29ff55a4cc0131f89063c6d267 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/15d5bb830178ce29ff55a4cc0131f89063c6d267 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] There is no package python3-bd2k
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 78949751 by Andreas Tille at 2018-04-12T13:45:47+02:00 There is no package python3-bd2k - - - - - 1 changed file: - tasks/bio-dev Changes: = tasks/bio-dev = --- a/tasks/bio-dev +++ b/tasks/bio-dev @@ -349,8 +349,7 @@ Recommends: python3-gffutils Recommends: python3-bx | python-bx WNPP: 851242 -Recommends: python3-bd2k | python-bd2k -WNPP: 851341 +Recommends: python-bd2k Recommends: libbio-eutilities-perl View it on GitLab: https://salsa.debian.org/blends-team/med/commit/789497516ef8d8a2f4f38cbdc33b6596c173a0e0 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/789497516ef8d8a2f4f38cbdc33b6596c173a0e0 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] Suppression of empty tasks works now reliably in blends-dev 0.6.104~
Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
f329 by Andreas Tille at 2018-04-11T16:56:16+02:00
Suppression of empty tasks works now reliably in blends-dev 0.6.104~
- - - - -
2 changed files:
- debian-med-tasks.desc
- debian/control
Changes:
=
debian-med-tasks.desc
=
--- a/debian-med-tasks.desc
+++ b/debian-med-tasks.desc
@@ -171,15 +171,6 @@ Description: Debian Med packages for rehabilitation
technologies
Key:
med-rehabilitation
-Task: med-research
-Parent: debian-med
-Section: debian-med
-Description: Debian Med packages for medical research
- This metapackage will install tools that are useful for
- medical research.
-Key:
- med-research
-
Task: med-statistics
Parent: debian-med
Section: debian-med
=
debian/control
=
--- a/debian/control
+++ b/debian/control
@@ -74,7 +74,6 @@ Suggests: med-cloud,
med-practice,
med-psychology,
med-rehabilitation,
- med-research,
med-tools,
med-typesetting
Description: Default selection of tasks for Debian Med
@@ -1604,17 +1603,6 @@ Description: Debian Med packages for rehabilitation
technologies
This metapackage will install tools that are useful for
rehabilitation and therapy.
-Package: med-research
-Section: metapackages
-Architecture: all
-Depends: ${misc:Depends},
- med-config (= ${source:Version}),
- med-tasks (= ${source:Version})
-Suggests: openclinica
-Description: Debian Med packages for medical research
- This metapackage will install tools that are useful for
- medical research.
-
Package: med-statistics
Section: metapackages
Architecture: all
View it on GitLab:
https://salsa.debian.org/blends-team/med/commit/f3291a220664447fa7bda9340d01f81e7176
---
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[Blends-commit] [Git][blends-team/website][master] Really fix Vcs URLs
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 22d8aac9 by Andreas Tille at 2018-04-07T07:27:19+02:00 Really fix Vcs URLs - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/commit/22d8aac9c8c069d69803578e15d6edabf4cb4603 --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/22d8aac9c8c069d69803578e15d6edabf4cb4603 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] Use annonymous Vcs URLs
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 674aa097 by Andreas Tille at 2018-04-06T22:03:13+02:00 Use annonymous Vcs URLs - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/commit/674aa0974f87b698b1fd4c851ec0e5617877be7b --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/674aa0974f87b698b1fd4c851ec0e5617877be7b You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] s/massxpert/msxpertsuite/
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 6451da2d by Andreas Tille at 2018-04-04T15:36:05+02:00 s/massxpert/msxpertsuite/ - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -133,7 +133,7 @@ Recommends: adun-core Suggests:adun.app -Recommends: avogadro, garlic, gamgi, gdpc, ghemical, jmol, pymol, r-cran-bio3d, massxpert +Recommends: avogadro, garlic, gamgi, gdpc, ghemical, jmol, pymol, r-cran-bio3d, msxpertsuite Recommends: gromacs View it on GitLab: https://salsa.debian.org/blends-team/med/commit/6451da2d816f762cf391f048676c79eee1c25431 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/6451da2d816f762cf391f048676c79eee1c25431 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][experimental] Description how Blends relevant data are gathered and stored
Andreas Tille pushed to branch experimental at Debian Blends Team / blends Commits: 3228dff2 by Andreas Tille at 2018-04-03T16:56:27+02:00 Description how Blends relevant data are gathered and stored - - - - - 1 changed file: - doc/en/A_devel.xml Changes: = doc/en/A_devel.xml = --- a/doc/en/A_devel.xml +++ b/doc/en/A_devel.xml @@ -911,4 +911,54 @@ the changes by doing: + + Description how Blends relevant data are gathered and stored + +All data relevant for Blends are available in +https://wiki.debian.org/UltimateDebianDatabase;>Ultimate Debian Database (UDD). +Here is a description of the data gatherers that were explicitly invented to provide +information for usage in Blends websentinel. + + + + Packages in Debian ftp new queue + +New packages might reside for some time in the so called new queue until +a member of the ftpmaster team has evaluated the package as fit for the +Debian distribution. To enable informing our users about that status the +new queue is parsed and the information displayed in the web sentinel pages. +The actual gatherer code can be found in UDD Git and is split into a +https://salsa.debian.org/qa/udd/blob/master/scripts/fetch_ftpnew.sh;>Script that fetches the data +and a https://salsa.debian.org/qa/udd/blob/master/udd/ftpnew_gatherer.py;>Parser which injects the data into UDD. + + + + + Machine readable data in Git repositories of Blends and some packaging teams + +Several machine readable data of packages are parsed from Git repositories. +There are data that might be more up to date in Git (for instance scientific +publication data or some registry entries). There are also data for not +yet available packages a Blends team is working on. To enable refering to +this data some selected Git repositories are parsed. The parser for Salsa +is available in the +https://salsa.debian.org/blends-team/website/blob/master/misc/machine_readable/fetch-machine-readable_salsa.py;>website Git +of the Blends project. It is running in a daily cron job on the host +http://blends.debian.net;>blends.debian.net and +creates an http://blends.debian.net/_machine-readable/machine-readable.tar.xz;>archive +with all the machine readable files found in the specified Git repositories. + + +This http://blends.debian.net/_machine-readable/machine-readable.tar.xz;>archive +is read into UDD by an +https://salsa.debian.org/qa/udd/blob/master/udd/blends_prospective_gatherer.py;>UDD +importer script in a cron job which is totally independent from the job +that collects the data from Salsa. Due to the disconnected jobs running on +different hosts there might be some undetermined delay between changing +some metadata in a Git repository and the time when the data are available +in UDD. + + + + View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/3228dff27d0983422d3ba0556b42594066c3ed12 --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/3228dff27d0983422d3ba0556b42594066c3ed12 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][experimental] s/alioth/salsa/
Andreas Tille pushed to branch experimental at Debian Blends Team / blends Commits: e2c1bc3f by Andreas Tille at 2018-04-03T16:04:29+02:00 s/alioth/salsa/ - - - - - 2 changed files: - doc/en/07_starting.xml - doc/en/08_websentinel.xml Changes: = doc/en/07_starting.xml = --- a/doc/en/07_starting.xml +++ b/doc/en/07_starting.xml @@ -171,12 +171,8 @@ written by Ben Armstrong sy...@debian.org. Sooner or later a Debian Pure Blend will establish an own project at - https://salsa.debian.org;>salsa.debian.org, since - this enables many features for group maintaining packages, create - mailing lists for different purposes, maintain a version control - system like Git etc. The Alioth project enables to provide - web sites as well and the Debian Med project is using this since a - long time. + https://salsa.debian.org;>salsa.debian.org to host + own Git repositories. Finally, the best way is to have a page @@ -204,9 +200,9 @@ written by Ben Armstrong sy...@debian.org. Repository - On http://alioth.debian.org/;>alioth.debian.org a - http://gforge.org/;>Gforge-site is running to host - all Debian related project work. Creating a project on Alioth is a + On https://salsa.debian.org/;>salsa.debian.org a + https://gitlab.com/;>GitLab instance is running to host + all Debian related project work. Creating a project on Salsa is a good idea to start teamwork on the code a Debian Pure Blend is releasing. = doc/en/08_websentinel.xml = --- a/doc/en/08_websentinel.xml +++ b/doc/en/08_websentinel.xml @@ -249,13 +249,6 @@ RFC822 files and - AliothUrl - URL of the Alioth project of the Blend (might be identical to - ProjectUrl) - - - - LogoUrl URL to a logo image of the Blend View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/e2c1bc3f4e7c21c226c0d9da849b5eb08661b97f --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/e2c1bc3f4e7c21c226c0d9da849b5eb08661b97f You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][master] s/alioth/salsa/
Andreas Tille pushed to branch master at Debian Blends Team / blends Commits: a276bd9e by Andreas Tille at 2018-04-03T16:13:49+02:00 s/alioth/salsa/ - - - - - 2 changed files: - doc/en/07_starting.xml - doc/en/08_websentinel.xml Changes: = doc/en/07_starting.xml = --- a/doc/en/07_starting.xml +++ b/doc/en/07_starting.xml @@ -171,12 +171,8 @@ written by Ben Armstrong sy...@debian.org. Sooner or later a Debian Pure Blend will establish an own project at - https://salsa.debian.org;>salsa.debian.org, since - this enables many features for group maintaining packages, create - mailing lists for different purposes, maintain a version control - system like Git etc. The Alioth project enables to provide - web sites as well and the Debian Med project is using this since a - long time. + https://salsa.debian.org;>salsa.debian.org to host + own Git repositories. Finally, the best way is to have a page @@ -204,9 +200,9 @@ written by Ben Armstrong sy...@debian.org. Repository - On http://alioth.debian.org/;>alioth.debian.org a - http://gforge.org/;>Gforge-site is running to host - all Debian related project work. Creating a project on Alioth is a + On https://salsa.debian.org/;>salsa.debian.org a + https://gitlab.com/;>GitLab instance is running to host + all Debian related project work. Creating a project on Salsa is a good idea to start teamwork on the code a Debian Pure Blend is releasing. = doc/en/08_websentinel.xml = --- a/doc/en/08_websentinel.xml +++ b/doc/en/08_websentinel.xml @@ -249,13 +249,6 @@ RFC822 files and - AliothUrl - URL of the Alioth project of the Blend (might be identical to - ProjectUrl) - - - - LogoUrl URL to a logo image of the Blend View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/a276bd9ed2262235f430b53ddbda7dcff463b597 --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/a276bd9ed2262235f430b53ddbda7dcff463b597 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] leave out list of changed metapackage dependencies which is messed up due to this change
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: db7efe58 by Andreas Tille at 2018-03-29T09:01:12+02:00 leave out list of changed metapackage dependencies which is messed up due to this change - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog = --- a/debian/changelog +++ b/debian/changelog @@ -3,6 +3,8 @@ debian-med (3.1) UNRELEASED; urgency=medium * Versioned Build-Depends bumped to 0.6.99 to enable Recommends in tasks files * s/Depends/Recommends/ +(leave out list of changed metapackage dependencies which is messed up + due to this change) * Moved to Salsa -- Andreas Tille <ti...@debian.org> Wed, 19 Apr 2017 21:09:03 +0200 View it on GitLab: https://salsa.debian.org/blends-team/med/commit/db7efe5839807efac4b7b8aa329de124e25924f8 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/db7efe5839807efac4b7b8aa329de124e25924f8 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][experimental] 2 commits: Sort tasks alphabethically in changelog
Andreas Tille pushed to branch experimental at Debian Blends Team / blends
Commits:
c611dc44 by Andreas Tille at 2018-03-29T08:44:07+02:00
Sort tasks alphabethically in changelog
- - - - -
dd6e6fe9 by Andreas Tille at 2018-03-29T08:45:14+02:00
Spacing
- - - - -
1 changed file:
- devtools/tasks_diff
Changes:
=
devtools/tasks_diff
=
--- a/devtools/tasks_diff
+++ b/devtools/tasks_diff
@@ -105,7 +105,7 @@ def compare_tasks(tasks, tasks_compare, taskprefix):
first_print = True
- for task in tasks:
+ for task in sorted(tasks):
if not task in tasks_compare:
continue
@@ -162,7 +162,7 @@ def compare_tasks(tasks, tasks_compare, taskprefix):
first_print = False
print("* Removed metapackages:")
for removedtask in removed_tasks:
- print(" -{0}-{1}".format(taskprefix, removedtask))
+ print(" - {0}-{1}".format(taskprefix, removedtask))
def load_tasks(tasks_path):
tasks = {}
View it on GitLab:
https://salsa.debian.org/blends-team/blends/compare/4fae955db14aabf3a442a6aeb08a1a62c7aa3935...dd6e6fe96759d4c5ed2bfec7c6799ffabe27beca
---
View it on GitLab:
https://salsa.debian.org/blends-team/blends/compare/4fae955db14aabf3a442a6aeb08a1a62c7aa3935...dd6e6fe96759d4c5ed2bfec7c6799ffabe27beca
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[Blends-commit] [Git][blends-team/blends][experimental] Use Deb822List to evaluate taskprefix rather than the old error prone method.
Andreas Tille pushed to branch experimental at Debian Blends Team / blends
Commits:
4fae955d by Andreas Tille at 2018-03-28T20:25:49+02:00
Use Deb822List to evaluate taskprefix rather than the old error prone method.
- - - - -
1 changed file:
- devtools/tasks_diff
Changes:
=
devtools/tasks_diff
=
--- a/devtools/tasks_diff
+++ b/devtools/tasks_diff
@@ -18,6 +18,11 @@ import argparse
import subprocess
from debian import deb822
+# I shamelessly copied class Deb822List into a file blends_helper.py to test
using it here
+# That's so hackish that I do not even commit this - needs further discussion
+from blends_helper import Deb822List
+from debian.deb822 import Deb822
+
#with this we distinguish the start of automatic entry in the changelog so we
#can replace the entry if needed
START_FLAG = "* start of automatic changelog entry *"
@@ -195,16 +200,9 @@ if __name__ == "__main__":
logger = logging.getLogger(__name__)
#load the taskprefix
- taskprefix = ""
- if not args.statusdump and args.compare:
- command = blend_dev_dir+"blend-get-names metapackageprefix"
- process = subprocess.Popen(command.split(),
stdout=subprocess.PIPE)
- output = process.communicate()[0].strip()
- if process.returncode != 0:
- logger.error(output)
- sys.exit(-1)
- else:
- taskprefix = output
+ with open(os.path.join('debian', 'control.stub'), encoding="UTF-8") as
fp:
+ control_stub = Deb822List(Deb822.iter_paragraphs(fp))
+ taskprefix = control_stub[0]['Source'].split('-', 1)[-1]
if not args.statusdump and not args.compare:
logger.error("At least -s/--statusdump or -c/--compare argument
must be provided")
View it on GitLab:
https://salsa.debian.org/blends-team/blends/commit/4fae955db14aabf3a442a6aeb08a1a62c7aa3935
---
View it on GitLab:
https://salsa.debian.org/blends-team/blends/commit/4fae955db14aabf3a442a6aeb08a1a62c7aa3935
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[Blends-commit] [Git][blends-team/blends][experimental] Fix path of dependency_data for changelog creation
Andreas Tille pushed to branch experimental at Debian Blends Team / blends Commits: eee797ae by Andreas Tille at 2018-03-28T19:58:29+02:00 Fix path of dependency_data for changelog creation - - - - - 1 changed file: - devtools/Makefile Changes: = devtools/Makefile = --- a/devtools/Makefile +++ b/devtools/Makefile @@ -69,7 +69,7 @@ ifneq "$(LATEST)" "$(PREVIOUS)" fi (sed $(LINESTART)q debian/changelog; \ -$(TASKSDIFF) --compare $(CURRENTPARH)/$(DEPENDENCIES_DATA)/$(BLEND)_$(LATEST).json,$(CURRENTPARH)/$(DEPENDENCIES_DATA)/$(BLEND)_$(PREVIOUS).json | sed 's/^/ /'; \ +$(TASKSDIFF) --compare $(DEPENDENCIES_DATA)/$(BLEND)_$(LATEST).json,$(DEPENDENCIES_DATA)/$(BLEND)_$(PREVIOUS).json | sed 's/^/ /'; \ sed -n '$(LINEEND),$$p' debian/changelog; ) > debian/changelog.new && mv debian/changelog.new debian/changelog else echo "It is the first release, skip the changelog entry" View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/eee797ae70f904a96b35a6681266abef72595d2c --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/eee797ae70f904a96b35a6681266abef72595d2c You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] Drop the format line again for further testing
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 7791fe21 by Andreas Tille at 2018-03-28T16:41:53+02:00 Drop the format line again for further testing - - - - - 23 changed files: - tasks/bio - tasks/bio-dev - tasks/bio-ngs - tasks/bio-phylogeny - tasks/cloud - tasks/cms - tasks/data - tasks/dental - tasks/epi - tasks/his - tasks/imaging - tasks/imaging-dev - tasks/laboratory - tasks/oncology - tasks/pharmacy - tasks/physics - tasks/practice - tasks/psychology - tasks/rehabilitation - tasks/research - tasks/statistics - tasks/tools - tasks/typesetting Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Biology Install: true Description: Debian Med bioinformatics packages = tasks/bio-dev = --- a/tasks/bio-dev +++ b/tasks/bio-dev @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Biology Development Install: true Description: Debian Med packages for development of bioinformatics applications = tasks/bio-ngs = --- a/tasks/bio-ngs +++ b/tasks/bio-ngs @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Next Generation Sequencing Metapackage: false Description: Debian Med bioinformatics applications usable in Next Generation Sequencing = tasks/bio-phylogeny = --- a/tasks/bio-phylogeny +++ b/tasks/bio-phylogeny @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Phylogeny Metapackage: false Description: Debian Med phylogeny packages = tasks/cloud = --- a/tasks/cloud +++ b/tasks/cloud @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Cloud Description: Debian Med bioinformatics applications usable in cloud computing This metapackage will install Debian packages related to molecular biology, = tasks/cms = --- a/tasks/cms +++ b/tasks/cms @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Content Management Metapackage: false Description: Debian Med content management systems = tasks/data = --- a/tasks/data +++ b/tasks/data @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Medical data Description: Debian Med drug databases This metapackage will install free drug databases and related = tasks/dental = --- a/tasks/dental +++ b/tasks/dental @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Dental Description: Debian Med packages related to dental practice This metapackage contains dependencies for a collection of software = tasks/epi = --- a/tasks/epi +++ b/tasks/epi @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Epidemiology Description: Debian Med epidemiology related packages This metapackage will install tools that are useful in epidemiological = tasks/his = --- a/tasks/his +++ b/tasks/his @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Hospital Information Systems Description: Debian Med suggestions for Hospital Information Systems This metapackage contains dependencies for software and that could = tasks/imaging = --- a/tasks/imaging +++ b/tasks/imaging @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Imaging Description: Debian Med image processing and visualization packages This metapackage will install Debian packages which might be useful in = tasks/imaging-dev = --- a/tasks/imaging-dev +++ b/tasks/imaging-dev @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Imaging Development Description: Debian Med image processing and visualization packages development This metapackage will install Debian packages which might be useful = tasks/laboratory = --- a/tasks/laboratory +++ b/tasks/laboratory @@ -1,4 +1,3 @@ -Format: https://blends.debian.org/blends/1.1 Task: Laboratory Description: Debian Med suggestions for medical laboratories This metapackage contains dependencies for software and that could = tasks/oncology = --- a/tasks/oncology +++ b/tasks
[Blends-commit] [Git][blends-team/blends][experimental] 2 commits: Try hard to get lintian error "blends-dev: python-script-but-no-python-dep…
Andreas Tille pushed to branch experimental at Debian Blends Team / blends
Commits:
6caa8085 by Andreas Tille at 2018-03-28T16:23:53+02:00
Try hard to get lintian error blends-dev: python-script-but-no-python-dep
usr/share/blends-dev/blend-gen-control solved - no idea why this failed.
- - - - -
da90c543 by Andreas Tille at 2018-03-28T16:24:41+02:00
ignore false lintian warning binary-package-depends-on-toolchain-package
- - - - -
4 changed files:
- + debian/blends-dev.lintian-overrides
- debian/changelog
- debian/control
- debian/rules
Changes:
=
debian/blends-dev.lintian-overrides
=
--- /dev/null
+++ b/debian/blends-dev.lintian-overrides
@@ -0,0 +1,2 @@
+# Dependency on debhelper is intended
+blends-dev: binary-package-depends-on-toolchain-package depends: debhelper (>=
9)
=
debian/changelog
=
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,13 @@
+blends (0.6.103) UNRELEASED; urgency=medium
+
+ * d/control:
+ - Build-Depends: dh-python, python3-all
+ - blends-dev: Depends: ${python3:Depends}
+ * d/rules: --with python3
+ * ignore false lintian warning binary-package-depends-on-toolchain-package
+
+ -- Andreas Tille <ti...@debian.org> Wed, 28 Mar 2018 16:22:10 +0200
+
blends (0.6.102) experimental; urgency=low
* blend-gen-control: Bugfixes, slight refactorization, documentation
=
debian/control
=
--- a/debian/control
+++ b/debian/control
@@ -10,7 +10,9 @@ Priority: optional
Build-Depends: debhelper (>= 10)
Build-Depends-Indep: xmlto,
dblatex,
- w3m
+ w3m,
+ dh-python,
+ python3-all
Standards-Version: 4.0.0
Vcs-Browser: https://salsa.debian.org/blends-team/blends
Vcs-Git: https://salsa.debian.org/blends-team/blends.git
@@ -20,7 +22,8 @@ Architecture: all
Depends: debconf,
make | build-essential,
debhelper (>= 9),
- ${misc:Depends}
+ ${misc:Depends},
+ ${python3:Depends}
Suggests: blends-doc
Replaces: cdd-dev
Description: Debian Pure Blends common files for developing metapackages
=
debian/rules
=
--- a/debian/rules
+++ b/debian/rules
@@ -8,7 +8,7 @@ include /usr/share/dpkg/default.mk
DISTDIR := $(DEB_SOURCE)-$(DEB_VERSION)
%:
- dh $@
+ dh $@ --with python3
override_dh_auto_build:
cd doc; $(MAKE) html; $(MAKE) txt; $(MAKE) pdf
View it on GitLab:
https://salsa.debian.org/blends-team/blends/compare/3120dc33c3d0eedee3533dfdd415f4464b06e40c...da90c543f0bf819808a889a9080ada1f91ba65d3
---
View it on GitLab:
https://salsa.debian.org/blends-team/blends/compare/3120dc33c3d0eedee3533dfdd415f4464b06e40c...da90c543f0bf819808a889a9080ada1f91ba65d3
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[Blends-commit] [Git][blends-team/med][master] 2 commits: Add biosyntax
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 1395e79f by Dylan Aïssi at 2018-03-27T21:57:09+02:00 Add biosyntax - - - - - 84fe938d by Andreas Tille at 2018-03-27T21:03:50+00:00 Merge branch master into master Add biosyntax See merge request blends-team/med!1 - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -460,6 +460,9 @@ Recommends: bio-eagle Recommends: bio-tradis +Recommends: biosyntax-gedit +Remark: Plugins for vim (biosyntax-vim) and less (biosyntax-less) are also available. + Recommends: bitseq Recommends: blat View it on GitLab: https://salsa.debian.org/blends-team/med/compare/ec82b07255867ded56f272980d195abde3973110...84fe938d8275a0697709f0964c3605272ce95c25 --- View it on GitLab: https://salsa.debian.org/blends-team/med/compare/ec82b07255867ded56f272980d195abde3973110...84fe938d8275a0697709f0964c3605272ce95c25 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] Add packages used by Bio-Linux which are not really specific for biology in statistics task
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 14508c08 by Andreas Tille at 2018-03-22T14:49:06+01:00 Add packages used by Bio-Linux which are not really specific for biology in statistics task - - - - - 1 changed file: - tasks/statistics Changes: = tasks/statistics = --- a/tasks/statistics +++ b/tasks/statistics @@ -24,3 +24,7 @@ Recommends: rstudio Recommends: r-bioc-multtest Recommends: r-cran-ade4 + +Recommends: r-cran-rwave, r-cran-snowfall, r-cran-wavethresh, r-cran-waveslim +Why: Used by Bio-Linux + View it on GitLab: https://salsa.debian.org/blends-team/med/commit/14508c08e84ab9c79640c404e7d3ede98efd0db3 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/14508c08e84ab9c79640c404e7d3ede98efd0db3 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] 2 commits: Do not fail if Dir to remove does not exist
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: adf656a2 by Andreas Tille at 2018-03-16T12:47:53+01:00 Do not fail if Dir to remove does not exist - - - - - ef95818f by Andreas Tille at 2018-03-16T12:48:26+01:00 File with upstream metadata need sto have extension .upstream - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/compare/ff72d87536c0ed5d95cd099b092bf8f0297a1022...ef95818f9cd46ea18c3977581ae78abfa7c39b0c --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/ff72d87536c0ed5d95cd099b092bf8f0297a1022...ef95818f9cd46ea18c3977581ae78abfa7c39b0c You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] Ups, upstream metadata and edam files got lost when introducing the return code of the subroutine
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: ff72d875 by Andreas Tille at 2018-03-16T09:57:30+01:00 Ups, upstream metadata and edam files got lost when introducing the return code of the subroutine - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/commit/ff72d87536c0ed5d95cd099b092bf8f0297a1022 --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/ff72d87536c0ed5d95cd099b092bf8f0297a1022 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][master] Degrade packages from contrib/non-free to Suggests even when enforcing strict depends
Andreas Tille pushed to branch master at Debian Blends Team / blends
Commits:
52c03be2 by Andreas Tille at 2018-03-15T19:38:47+01:00
Degrade packages from contrib/non-free to Suggests even when enforcing strict
depends
- - - - -
2 changed files:
- debian/changelog
- devtools/blend-gen-control
Changes:
=
debian/changelog
=
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,6 +1,9 @@
blends (0.6.101) UNRELEASED; urgency=medium
* Moved to Salsa
+ * Degrade packages from contrib/non-free to Suggests even when enforcing
+strict depends
+Closes: #891188
-- Andreas Tille <ti...@debian.org> Fri, 02 Mar 2018 14:44:16 +0100
=
devtools/blend-gen-control
=
--- a/devtools/blend-gen-control
+++ b/devtools/blend-gen-control
@@ -264,20 +264,31 @@ sub gen_control {
else {
my $pkglist;
my $missinglist;
+my $pkgcandidate;
if (defined $taskinfo{$task}{Depends})
{
($pkglist, $missinglist) =
process_pkglist(join(",",@{$taskinfo{$task}{Depends}}));
}
+# make sure that $missinglist will not remain empty if there
are no Depends defined
+if (defined $taskinfo{$task}{Recommends})
+{
+($pkglist, $missinglist) =
process_pkglist(join(",",@{$taskinfo{$task}{Recommends}}));
+}
my (@depends, @recommends, @suggests);
push @depends, $tasksname.' (= ${source:Version})';
push @depends, '${misc:Depends}';
-push @depends, @{$pkglist}
-if defined $pkglist;
-
-push @recommends, @{$taskinfo{$task}{Recommends}}
-if defined $taskinfo{$task}{Recommends};
+if ( defined $pkglist ) {
+for $pkgcandidate (@{$pkglist}) {
+unless ( grep( /^$pkgcandidate$/, $missinglist ) ) {
push @depends, $pkgcandidate };
+}
+}
+if ( defined $taskinfo{$task}{Recommends} ) {
+for $pkgcandidate (@{$taskinfo{$task}{Recommends}}) {
+unless ( grep( /^$pkgcandidate$/, $missinglist ) ) {
push @recommends, $pkgcandidate };
+}
+}
push @suggests, @{$missinglist}
if defined $missinglist;
View it on GitLab:
https://salsa.debian.org/blends-team/blends/commit/52c03be2a1f688e252b919122427d420d6bcf334
---
View it on GitLab:
https://salsa.debian.org/blends-team/blends/commit/52c03be2a1f688e252b919122427d420d6bcf334
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[Blends-commit] [Git][blends-team/blends][docbook-xml] Some attempt to fix bugs via Script ...
Andreas Tille pushed to branch docbook-xml at Debian Blends Team / blends Commits: 72f84272 by Andreas Tille at 2018-03-02T15:57:09+01:00 Some attempt to fix bugs via Script ... - - - - - 1 changed file: - + doc/docbook-xml/0convert Changes: = doc/docbook-xml/0convert = --- /dev/null +++ b/doc/docbook-xml/0convert @@ -0,0 +1,10 @@ +sed -i 's?<\(/*package\)>??g' *.xml +sed -i 's?<\(/*programlisting\)>??g' *.xml +sed -i 's?<\(/*filename\)>??g' *.xml + + + + + + + View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/72f84272d1139e70ba2855302523c610a961dfa5 --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/72f84272d1139e70ba2855302523c610a961dfa5 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] vcs file needs an additional Blends field to work with UDD gatherer
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 0b70094b by Andreas Tille at 2018-03-14T13:28:16+01:00 vcs file needs an additional Blends field to work with UDD gatherer - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/commit/0b70094b19bc0e7ea5b92844f0ba96d9657e5c7b --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/0b70094b19bc0e7ea5b92844f0ba96d9657e5c7b You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] 2 commits: Remove attempt to implement fetch-machine-readable in POSIX shell since there is…
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: c6724437 by Andreas Tille at 2018-03-13T14:58:21+01:00 Remove attempt to implement fetch-machine-readable in POSIX shell since there is a flawless solution in Python now - - - - - d4047509 by Andreas Tille at 2018-03-13T17:20:57+01:00 Add more teams, list number or project for team to provide some sanity check (which fails for Debian Perl Group), list missing teams on Salsa - - - - - 2 changed files: - − misc/machine_readable/fetch-machine-readable_salsa - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/compare/b3c2cae187474fff5a61d9e25548b3c8e1124bb9...d4047509162863f2138b4420e0078abf4a6f3da5 --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/b3c2cae187474fff5a61d9e25548b3c8e1124bb9...d4047509162863f2138b4420e0078abf4a6f3da5 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] 3 commits: Fetch data from all teams
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 59a6eb1c by Andreas Tille at 2018-03-13T12:15:58+01:00 Fetch data from all teams - - - - - c7877217 by Andreas Tille at 2018-03-13T14:10:11+01:00 Tarball should have machine-readable as root dir - - - - - b3c2cae1 by Andreas Tille at 2018-03-13T14:10:42+01:00 Add some language teams that are maintaining Blends specific packages and were part of the machine-readable checkout before - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/compare/6b504dfca949f123700bbd78e65885f45afe6052...b3c2cae187474fff5a61d9e25548b3c8e1124bb9 --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/6b504dfca949f123700bbd78e65885f45afe6052...b3c2cae187474fff5a61d9e25548b3c8e1124bb9 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] 2 commits: basic error handling if there is no debian/ dir
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: da324913 by Andreas Tille at 2018-03-13T08:56:21+01:00 basic error handling if there is no debian/ dir - - - - - 6b504dfc by Andreas Tille at 2018-03-13T09:22:31+01:00 More sensible handling of errors in empty repositories - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/compare/a644bca3593707b5902edb0c99299f7e68dc20e4...6b504dfca949f123700bbd78e65885f45afe6052 --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/a644bca3593707b5902edb0c99299f7e68dc20e4...6b504dfca949f123700bbd78e65885f45afe6052 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] Download metadata files
Andreas Tille pushed to branch master at Debian Blends Team / website
Commits:
a644bca3 by Andreas Tille at 2018-03-12T20:15:41+01:00
Download metadata files
- - - - -
1 changed file:
- misc/machine_readable/fetch-machine-readable_salsa.py
Changes:
=
misc/machine_readable/fetch-machine-readable_salsa.py
=
--- a/misc/machine_readable/fetch-machine-readable_salsa.py
+++ b/misc/machine_readable/fetch-machine-readable_salsa.py
@@ -3,6 +3,7 @@
import gitlab
import os
import shutil
+import base64
BLENDSGROUPS=[ 'Debian 3D Printing Team'
, 'Debian Accessibility Team'
@@ -21,9 +22,19 @@ BLENDSGROUPS=[ 'Debian 3D Printing Team'
, 'Debichem'
]
+
# just start with one team
BLENDSGROUPS=[ 'Debian Med' ]
+debianmetadata = [ 'changelog',
+ 'control',
+ 'copyright',
+ 'README.Debian'
+ ]
+upstreammetadata = [ 'edam',
+ 'metadata'
+ ]
+
TDNAME='machine-readable'
MACHINEREADABLEARCHIVE='/srv/blends.debian.org/www/_'+TDNAME+'/'+TDNAME+'.tar.xz'
READMEDEBIANARCHIVE='/srv/blends.debian.org/www/_'+TDNAME+'/README.Debian.tar.xz'
@@ -41,6 +52,16 @@ def get_blends_groups():
blends_groups.append(group)
return blends_groups
+def output_metadata(subdir, metadata):
+items = project.repository_tree(path=subdir)
+for item in items:
+if item['name'] in metadata:
+file_info = project.repository_blob(item['id'])
+content = base64.b64decode(file_info['content'])
+with open(os.path.join(namedir,name+'.'+item['name']), 'wb') as
out:
+out.write(content)
+out.close()
+
# SALSA_TOKEN=os.environ['SALSA_TOKEN']
gl = gitlab.Gitlab("https://salsa.debian.org;) # , private_token=SALSA_TOKEN)
# anonymous access is fine
@@ -49,8 +70,12 @@ blends_groups = get_blends_groups()
for group in blends_groups:
print(group.attributes['name'], group.attributes['id'],
group.attributes['path']) # , group.attributes['description'],
group.attributes['full_name'])
gpath = group.attributes['path']
-projects = group.projects.list(all=True, order_by='name', sort='asc')
-for project in projects:
+#projects = group.projects.list(all=True, order_by='name', sort='asc')
+#projects = group.projects.all(order_by='name', sort='asc')
+# DEBUG : only few projects to be faster
+projects = group.projects.list(page=1, per_page=10, order_by='name',
sort='asc')
+for pr in projects:
+project = gl.projects.get(pr.attributes['id']) # without this extra
get repository_tree() fails
name = project.attributes['name']
namedir = os.path.join(TARGETDIR, name[0])
if not os.path.exists(namedir):
@@ -59,8 +84,6 @@ for group in blends_groups:
out.write("Vcs-Browser: g...@salsa.debian.org:%s/%s\n" % (gpath,
name))
out.write("Vcs-Git: g...@salsa.debian.org:%s/%s.git\n" % (gpath,
name))
out.close()
-
-#for project in git.getall(git.getprojects):
-#print(project['name'], project['path_with_namespace'], project['id'])
-# getrawfile(project['id'], 'master', 'debian/changelog')
-# getfile(project['id'], 'debian/changelog', 'master')
\ No newline at end of file
+# print(project)
+output_metadata('debian', debianmetadata)
+output_metadata('debian/upstream', upstreammetadata)
View it on GitLab:
https://salsa.debian.org/blends-team/website/commit/a644bca3593707b5902edb0c99299f7e68dc20e4
---
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[Blends-commit] [Git][blends-team/website][master] 2 commits: Machine readable files output: 1. *.vcs file (simply storing where the files were found)
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 26d8176a by Andreas Tille at 2018-03-12T12:48:39+01:00 Machine readable files output: 1. *.vcs file (simply storing where the files were found) - - - - - a644bca3 by Andreas Tille at 2018-03-12T20:15:41+01:00 Download metadata files - - - - - 1 changed file: - misc/machine_readable/fetch-machine-readable_salsa.py View it on GitLab: https://salsa.debian.org/blends-team/website/compare/2d24dfe502b94706a996fa79d94c07fc4527e290...a644bca3593707b5902edb0c99299f7e68dc20e4 --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/2d24dfe502b94706a996fa79d94c07fc4527e290...a644bca3593707b5902edb0c99299f7e68dc20e4 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] Machine readable files output: 1. *.vcs file (simply storing where the files were found)
Andreas Tille pushed to branch master at Debian Blends Team / website
Commits:
26d8176a by Andreas Tille at 2018-03-12T12:48:39+01:00
Machine readable files output: 1. *.vcs file (simply storing where the files
were found)
- - - - -
1 changed file:
- misc/machine_readable/fetch-machine-readable_salsa.py
Changes:
=
misc/machine_readable/fetch-machine-readable_salsa.py
=
--- a/misc/machine_readable/fetch-machine-readable_salsa.py
+++ b/misc/machine_readable/fetch-machine-readable_salsa.py
@@ -2,8 +2,7 @@
import gitlab
import os
-
-PER_PAGE=99
+import shutil
BLENDSGROUPS=[ 'Debian 3D Printing Team'
, 'Debian Accessibility Team'
@@ -22,6 +21,17 @@ BLENDSGROUPS=[ 'Debian 3D Printing Team'
, 'Debichem'
]
+# just start with one team
+BLENDSGROUPS=[ 'Debian Med' ]
+
+TDNAME='machine-readable'
+MACHINEREADABLEARCHIVE='/srv/blends.debian.org/www/_'+TDNAME+'/'+TDNAME+'.tar.xz'
+READMEDEBIANARCHIVE='/srv/blends.debian.org/www/_'+TDNAME+'/README.Debian.tar.xz'
+TARGETDIR=os.path.join(os.environ['HOME'],TDNAME)
+# cleanup TARGETDIR first
+shutil.rmtree(TARGETDIR)
+os.makedirs(TARGETDIR)
+
def get_blends_groups():
blends_groups=[]
groups = gl.groups.list(all=True, order_by='name', sort='asc')
@@ -38,9 +48,17 @@ gl = gitlab.Gitlab("https://salsa.debian.org;) # ,
private_token=SALSA_TOKEN) #
blends_groups = get_blends_groups()
for group in blends_groups:
print(group.attributes['name'], group.attributes['id'],
group.attributes['path']) # , group.attributes['description'],
group.attributes['full_name'])
+gpath = group.attributes['path']
projects = group.projects.list(all=True, order_by='name', sort='asc')
for project in projects:
-print(" ", project.attributes['name'])
+name = project.attributes['name']
+namedir = os.path.join(TARGETDIR, name[0])
+if not os.path.exists(namedir):
+os.makedirs(namedir)
+with open(os.path.join(namedir,name+'.vcs'), 'w') as out:
+out.write("Vcs-Browser: g...@salsa.debian.org:%s/%s\n" % (gpath,
name))
+out.write("Vcs-Git: g...@salsa.debian.org:%s/%s.git\n" % (gpath,
name))
+out.close()
#for project in git.getall(git.getprojects):
#print(project['name'], project['path_with_namespace'], project['id'])
View it on GitLab:
https://salsa.debian.org/blends-team/website/commit/26d8176a0565f4683f3ea573cb4d6aaed06541aa
---
View it on GitLab:
https://salsa.debian.org/blends-team/website/commit/26d8176a0565f4683f3ea573cb4d6aaed06541aa
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[Blends-commit] [Git][blends-team/website][master] 2 commits: Avoid failures for empty list
Andreas Tille pushed to branch master at Debian Blends Team / website
Commits:
460575c3 by Andreas Tille at 2018-03-12T11:25:52+01:00
Avoid failures for empty list
- - - - -
17f7b6d4 by Andreas Tille at 2018-03-12T12:13:44+01:00
Use python3-gitlab to fetch machine readable data from salsa: 1st step - get
relevant blends groups
- - - - -
2 changed files:
- misc/machine_readable/fetch-machine-readable_salsa
- + misc/machine_readable/fetch-machine-readable_salsa.py
Changes:
=
misc/machine_readable/fetch-machine-readable_salsa
=
--- a/misc/machine_readable/fetch-machine-readable_salsa
+++ b/misc/machine_readable/fetch-machine-readable_salsa
@@ -47,11 +47,13 @@ list_salsa_projects () {
TOTAL_PAGES=$(grep ^X-Total-Pages: $HEADERS_FILE)
TOTAL_PAGES=${TOTAL_PAGES#*: }
- while [ $PAGENO -lt $TOTAL_PAGES ]
- do
-PAGENO=$((PAGENO+1))
-get_one_page
- done
+ if [ "$TOTAL_PAGES" != "" ] ; then
+while [ $PAGENO -lt $TOTAL_PAGES ]
+do
+ PAGENO=$((PAGENO+1))
+ get_one_page
+done
+ fi
}
mkdir -p $TARGETDIR
=
misc/machine_readable/fetch-machine-readable_salsa.py
=
--- /dev/null
+++ b/misc/machine_readable/fetch-machine-readable_salsa.py
@@ -0,0 +1,46 @@
+#!/usr/bin/python3
+
+import gitlab
+import os
+
+PER_PAGE=99
+
+BLENDSGROUPS=[ 'Debian 3D Printing Team'
+ , 'Debian Accessibility Team'
+ , 'Debian Astro Team'
+ , 'Debian Edu Packaging Team'
+ , 'Debian Electronics'
+ , 'Debian Games'
+ , 'Debian GIS Project'
+ , 'Debian Hamradio Maintainers'
+ , 'Debian IoT'
+ , 'Debian Med'
+ , 'Debian Multimedia Team'
+ , 'Debian PhotoTools Team'
+ , 'Debian R Packages Maintainers'
+ , 'Debian Science Team'
+ , 'Debichem'
+ ]
+
+def get_blends_groups():
+blends_groups=[]
+groups = gl.groups.list(all=True)
+for group in groups:
+# print(group.attributes['name'])
+if group.attributes['name'] in BLENDSGROUPS:
+blends_groups.append(group.attributes)
+return blends_groups
+
+# SALSA_TOKEN=os.environ['SALSA_TOKEN']
+
+gl = gitlab.Gitlab("https://salsa.debian.org;) # , private_token=SALSA_TOKEN)
# anonymous access is fine
+
+blends_groups = get_blends_groups()
+for group in blends_groups:
+print(group['name'], group['id'], group['path'], group['description'],
group['full_name'])
+
+
+#for project in git.getall(git.getprojects):
+#print(project['name'], project['path_with_namespace'], project['id'])
+# getrawfile(project['id'], 'master', 'debian/changelog')
+# getfile(project['id'], 'debian/changelog', 'master')
\ No newline at end of file
View it on GitLab:
https://salsa.debian.org/blends-team/website/compare/abda6e492c7e8dafa9ceceffbe52c53e969e8d45...17f7b6d41dc62857080f8f857524749abe09e0ad
---
View it on GitLab:
https://salsa.debian.org/blends-team/website/compare/abda6e492c7e8dafa9ceceffbe52c53e969e8d45...17f7b6d41dc62857080f8f857524749abe09e0ad
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[Blends-commit] [Git][blends-team/website][master] Get projects of Blends team (as sorted list to somehow get reproducibility of…
Andreas Tille pushed to branch master at Debian Blends Team / website
Commits:
2d24dfe5 by Andreas Tille at 2018-03-12T12:28:08+01:00
Get projects of Blends team (as sorted list to somehow get reproducibility of
results for better debugging)
- - - - -
1 changed file:
- misc/machine_readable/fetch-machine-readable_salsa.py
Changes:
=
misc/machine_readable/fetch-machine-readable_salsa.py
=
--- a/misc/machine_readable/fetch-machine-readable_salsa.py
+++ b/misc/machine_readable/fetch-machine-readable_salsa.py
@@ -24,11 +24,11 @@ BLENDSGROUPS=[ 'Debian 3D Printing Team'
def get_blends_groups():
blends_groups=[]
-groups = gl.groups.list(all=True)
+groups = gl.groups.list(all=True, order_by='name', sort='asc')
for group in groups:
# print(group.attributes['name'])
if group.attributes['name'] in BLENDSGROUPS:
-blends_groups.append(group.attributes)
+blends_groups.append(group)
return blends_groups
# SALSA_TOKEN=os.environ['SALSA_TOKEN']
@@ -37,8 +37,10 @@ gl = gitlab.Gitlab("https://salsa.debian.org;) # ,
private_token=SALSA_TOKEN) #
blends_groups = get_blends_groups()
for group in blends_groups:
-print(group['name'], group['id'], group['path'], group['description'],
group['full_name'])
-
+print(group.attributes['name'], group.attributes['id'],
group.attributes['path']) # , group.attributes['description'],
group.attributes['full_name'])
+projects = group.projects.list(all=True, order_by='name', sort='asc')
+for project in projects:
+print(" ", project.attributes['name'])
#for project in git.getall(git.getprojects):
#print(project['name'], project['path_with_namespace'], project['id'])
View it on GitLab:
https://salsa.debian.org/blends-team/website/commit/2d24dfe502b94706a996fa79d94c07fc4527e290
---
View it on GitLab:
https://salsa.debian.org/blends-team/website/commit/2d24dfe502b94706a996fa79d94c07fc4527e290
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[Blends-commit] [Git][blends-team/med][master] Add bali-phy
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: ed267ec2 by Andreas Tille at 2018-03-12T09:43:20+01:00 Add bali-phy - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -441,6 +441,8 @@ Recommends: axe-demultiplexer Recommends: axparafit, axpcoords +Recommends: bali-phy + Recommends: barrnap Recommends: bamtools View it on GitLab: https://salsa.debian.org/blends-team/med/commit/ed267ec2ffd347060515f57f699cb8089eb0378d --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/ed267ec2ffd347060515f57f699cb8089eb0378d You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] 2 commits: Add chromhmm
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 9512b2e6 by Andreas Tille at 2018-03-12T09:09:25+01:00 Add chromhmm - - - - - f780924a by Andreas Tille at 2018-03-12T09:11:54+01:00 Add some R packages used by Bio-Linux - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -477,6 +477,8 @@ Recommends: centrifuge Recommends: cellprofiler +Recommends: chromhmm + Recommends: cgview, brig Recommends: cinema @@ -869,6 +871,8 @@ Recommends: r-bioc-ebseq Recommends: r-bioc-limma +Recommends: r-bioc-bitseq, r-bioc-pcamethods, r-cran-samr + Suggests: r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-ensembldb, r-bioc-go.db Suggests: r-bioc-savr View it on GitLab: https://salsa.debian.org/blends-team/med/compare/101489524ae50f03e8cbad4e916ebc262ab63dbd...f780924ada5e4f89ae729ad41af84d27fce8cbfc --- View it on GitLab: https://salsa.debian.org/blends-team/med/compare/101489524ae50f03e8cbad4e916ebc262ab63dbd...f780924ada5e4f89ae729ad41af84d27fce8cbfc You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends] Pushed new branch docbook-xml
Andreas Tille pushed new branch docbook-xml at Debian Blends Team / blends --- View it on GitLab: https://salsa.debian.org/blends-team/blends/tree/docbook-xml You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends][master] Moved to Salsa
Andreas Tille pushed to branch master at Debian Blends Team / blends Commits: a1b6c80d by Andreas Tille at 2018-03-02T14:44:54+01:00 Moved to Salsa - - - - - 2 changed files: - debian/changelog - debian/control Changes: = debian/changelog = --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,9 @@ +blends (0.6.101) UNRELEASED; urgency=medium + + * Moved to Salsa + + -- Andreas Tille <ti...@debian.org> Fri, 02 Mar 2018 14:44:16 +0100 + blends (0.6.100) unstable; urgency=medium * Team upload = debian/control = --- a/debian/control +++ b/debian/control @@ -12,8 +12,8 @@ Build-Depends-Indep: xmlto, dblatex, w3m Standards-Version: 4.0.0 -Vcs-Browser: https://anonscm.debian.org/cgit/blends/blends.git -Vcs-Git: https://anonscm.debian.org/git/blends/blends.git +Vcs-Browser: https://salsa.debian.org/blends-team/blends +Vcs-Git: https://salsa.debian.org/blends-team/blends.git Package: blends-dev Architecture: all View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/a1b6c80d8f3b1a5e54d1197d4a789a62976ad90b --- View it on GitLab: https://salsa.debian.org/blends-team/blends/commit/a1b6c80d8f3b1a5e54d1197d4a789a62976ad90b You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] Web sentinel moved to Salsa
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: abda6e49 by Andreas Tille at 2018-03-02T13:20:45+01:00 Web sentinel moved to Salsa - - - - - 1 changed file: - README.txt Changes: = README.txt = --- a/README.txt +++ b/README.txt @@ -8,7 +8,7 @@ Getting started with Blends Web Sentinels $ sudo mkdir -p /srv $ sudo chmod $ cd /srv - $ git clone git://git.debian.org/git/blends/website.git blends.debian.org + $ git clone https://salsa.debian.org/blends-team/website.git blends.debian.org - Install all the dependencies mentioned in 'blends.debian.org/webtools/0dependencies' View it on GitLab: https://salsa.debian.org/blends-team/website/commit/abda6e492c7e8dafa9ceceffbe52c53e969e8d45 --- View it on GitLab: https://salsa.debian.org/blends-team/website/commit/abda6e492c7e8dafa9ceceffbe52c53e969e8d45 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/website][master] 2 commits: Fix some URLs
Andreas Tille pushed to branch master at Debian Blends Team / website Commits: 20ebb2f6 by Andreas Tille at 2018-03-01T10:02:14+01:00 Fix some URLs - - - - - b0522484 by Andreas Tille at 2018-03-01T13:55:51+01:00 Debian Astro moved to Salsa - - - - - 4 changed files: - webtools/webconf/debian-accessibility.conf - webtools/webconf/debian-astro.conf - webtools/webconf/debian-imaging.conf - webtools/webconf/debian-multimedia.conf Changes: = webtools/webconf/debian-accessibility.conf = --- a/webtools/webconf/debian-accessibility.conf +++ b/webtools/webconf/debian-accessibility.conf @@ -2,7 +2,7 @@ Blend: debian-accessibility ProjectName: Debian Accessibility ProjectUrl: https://www.debian.org/devel/debian-accessibility Homepage:https://www.debian.org/devel/debian-accessibility -AliothUrl: https://blends.alioth.debian.org/accessibility +AliothUrl: https://blends.debian.org/accessibility ProjectList: debian-accessibil...@lists.debian.org OutputDir: /srv/blends.debian.org/www/accessibility DataDir: /srv/blends.debian.org/data/accessibility = webtools/webconf/debian-astro.conf = --- a/webtools/webconf/debian-astro.conf +++ b/webtools/webconf/debian-astro.conf @@ -2,11 +2,11 @@ Blend: debian-astro ProjectName: Debian Astro ProjectUrl: https://blends.debian.org/astro/ Homepage:https://wiki.debian.org/DebianAstro -AliothUrl: https://alioth.debian.org/projects/debian-astro/ +AliothUrl: https://salsa.debian.org/debian-astro-team/debian-astro ProjectList: debian-as...@lists.debian.org OutputDir: /srv/blends.debian.org/www/astro DataDir: /srv/blends.debian.org/data/astro -VcsDir: git://anonscm.debian.org/blends/projects/astro.git +VcsDir: https://salsa.debian.org/debian-astro-team/debian-astro.git CSS: ../inc/style.css PkgList: debian-astro-maintain...@lists.alioth.debian.org DehsMail:oleb...@debian.org = webtools/webconf/debian-imaging.conf = --- a/webtools/webconf/debian-imaging.conf +++ b/webtools/webconf/debian-imaging.conf @@ -1,8 +1,8 @@ Blend: debian-imaging ProjectName: Debian Imaging -ProjectUrl: https://blends.alioth.debian.org/imaging -Homepage:https://blends.alioth.debian.org/imaging -AliothUrl: https://blends.alioth.debian.org/imaging +ProjectUrl: https://blends.debian.org/imaging +Homepage:https://blends.debian.org/imaging +AliothUrl: https://blends.debian.org/imaging ProjectList: ti...@debian.org OutputDir: /srv/blends.debian.org/www/imaging DataDir: /srv/blends.debian.org/data/debian-imaging = webtools/webconf/debian-multimedia.conf = --- a/webtools/webconf/debian-multimedia.conf +++ b/webtools/webconf/debian-multimedia.conf @@ -1,8 +1,8 @@ Blend: debian-multimedia ProjectName: Debian Multimedia -ProjectUrl: https://blends.alioth.debian.org/multimedia -Homepage:https://blends.alioth.debian.org/multimedia -AliothUrl: https://blends.alioth.debian.org/multimedia +ProjectUrl: https://blends.debian.org/multimedia +Homepage:https://blends.debian.org/multimedia +AliothUrl: https://blends.debian.org/multimedia ProjectList: debian-multime...@lists.debian.org OutputDir: /srv/blends.debian.org/www/multimedia DataDir: /srv/blends.debian.org/data/multimedia-blends View it on GitLab: https://salsa.debian.org/blends-team/website/compare/bada8922816369b51f6bef7647e28889e7ab1a36...b05224842e229788f6bb49903719e43d94e4bfcd --- View it on GitLab: https://salsa.debian.org/blends-team/website/compare/bada8922816369b51f6bef7647e28889e7ab1a36...b05224842e229788f6bb49903719e43d94e4bfcd You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][debian-astro-team/debian-astro][master] 2 commits: Python tasks cleanup; add astropy-healpix
Andreas Tille pushed to branch master at Debian Astro Team / debian-astro Commits: ee1c6768 by Ole Streicher at 2018-01-31T09:07:44+01:00 Python tasks cleanup; add astropy-healpix - - - - - 70f3d447 by Ole Streicher at 2018-02-01T17:39:13+01:00 Add Gnuastro to ascl - - - - - 3 changed files: - tasks/ascl - tasks/python - tasks/python3 Changes: = tasks/ascl = --- a/tasks/ascl +++ b/tasks/ascl @@ -370,3 +370,6 @@ Remark: ASCL-Id 1711.014 Recommends: iraf-rvsao WNPP: 887373 Remark: ASCL-Id 9912.003 + +Recommends: gnuastro +Remark: ASCL-Id 1801.009 = tasks/python = --- a/tasks/python +++ b/tasks/python @@ -18,6 +18,9 @@ Why: generic Python packages for astronomy Recommends: python-astropy-affiliated +Recommends: python-astropy-healpix +WNPP: 70 + Recommends: python-astroscrappy, python-astroplan, python-astroquery, python-ccdproc, python-gwcs, python-halotools, python-imexam, python-montage-wrapper, python-naima, python-photutils, python-pydl, @@ -32,7 +35,6 @@ Recommends: python-gammapy WNPP: 795369 Recommends: python-drizzle -WNPP: 843668 Recommends: python-asdf @@ -120,12 +122,6 @@ Pkg-Description: Fast interstellar dust extinction laws empirical dust extinction laws found in the astronomical literature. Recommends: python-radio-beam -WNPP: 879683 -Homepage: http://radio-beam.readthedocs.org -Pkg-Description: Python 2 Tools for Radio Beam IO and Manipulation - Radio Beam is a simple toolkit for reading beam information from FITS - headers and manipulating beams. Some example applications include - Convolution/deconvolution and Unit conversion (Jy to/from K). Recommends: python-mvpa2 Why: ASCL Id 1703.009 @@ -144,11 +140,4 @@ Pkg-Description: Toolkit for fitting and manipulating spectroscopic data baseline/continuum fitting, and equivalent width measurements. Recommends: python-pyraf -WNPP: 711038 -Homepage: http://www.stsci.edu/institute/software_hardware/pyraf -Pkg-Description: Python interface for IRAF - PyRAF is a command language for running IRAF tasks that is based on - the Python scripting language. It gives users the ability to run IRAF - tasks in an environment that has all the power and flexibility of - Python. PyRAF can be installed along with an existing IRAF installation; - users can then choose to run either PyRAF or the IRAF CL. + = tasks/python3 = --- a/tasks/python3 +++ b/tasks/python3 @@ -14,6 +14,9 @@ Why: Generic Python packages for astronomy Recommends: python3-astropy-affiliated +Recommends: python3-astropy-healpix +WNPP: 70 + Recommends: python3-astroscrappy, python3-astroplan, python3-astroquery, python3-ccdproc, python3-gwcs, python3-halotools, python3-imexam, python3-montage-wrapper, python3-naima, python3-photutils, python3-pydl, @@ -30,7 +33,6 @@ Recommends: python3-gammapy WNPP: 795369 Recommends: python3-drizzle -WNPP: 843668 Recommends: python3-asdf @@ -102,12 +104,6 @@ Pkg-Description: Fast interstellar dust extinction laws empirical dust extinction laws found in the astronomical literature. Recommends: python3-radio-beam -WNPP: 879683 -Homepage: http://radio-beam.readthedocs.org -Pkg-Description: Python 3 Tools for Radio Beam IO and Manipulation - Radio Beam is a simple toolkit for reading beam information from FITS - headers and manipulating beams. Some example applications include - Convolution/deconvolution and Unit conversion (Jy to/from K). Recommends: python3-mvpa2 Why: ASCL Id 1703.009 @@ -126,11 +122,3 @@ Pkg-Description: Toolkit for fitting and manipulating spectroscopic data baseline/continuum fitting, and equivalent width measurements. Recommends: python3-pyraf -WNPP: 711038 -Homepage: http://www.stsci.edu/institute/software_hardware/pyraf -Pkg-Description: Python interface for IRAF - PyRAF is a command language for running IRAF tasks that is based on - the Python scripting language. It gives users the ability to run IRAF - tasks in an environment that has all the power and flexibility of - Python. PyRAF can be installed along with an existing IRAF installation; - users can then choose to run either PyRAF or the IRAF CL. View it on GitLab: https://salsa.debian.org/debian-astro-team/debian-astro/compare/47aee727e24b41ed93e1dd969b4edbe99f5a6048...70f3d447b3f83d5d9a5039dac4a26f4e2b793c09 --- View it on GitLab: https://salsa.debian.org/debian-astro-team/debian-astro/compare/47aee727e24b41ed93e1dd969b4edbe99f5a6048...70f3d447b3f83d5d9a5039dac4a26f4e2b793c09 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. b05224842e229788f6bb49903719e43d94e4bfcd
The following commit has been merged in the master branch: commit b05224842e229788f6bb49903719e43d94e4bfcd Author: Andreas Tille <ti...@debian.org> Date: Thu Mar 1 13:55:51 2018 +0100 Debian Astro moved to Salsa diff --git a/webtools/webconf/debian-astro.conf b/webtools/webconf/debian-astro.conf index 0ad0d71..1b8ffb6 100644 --- a/webtools/webconf/debian-astro.conf +++ b/webtools/webconf/debian-astro.conf @@ -2,11 +2,11 @@ Blend: debian-astro ProjectName: Debian Astro ProjectUrl: https://blends.debian.org/astro/ Homepage:https://wiki.debian.org/DebianAstro -AliothUrl: https://alioth.debian.org/projects/debian-astro/ +AliothUrl: https://salsa.debian.org/debian-astro-team/debian-astro ProjectList: debian-as...@lists.debian.org OutputDir: /srv/blends.debian.org/www/astro DataDir: /srv/blends.debian.org/data/astro -VcsDir: git://anonscm.debian.org/blends/projects/astro.git +VcsDir: https://salsa.debian.org/debian-astro-team/debian-astro.git CSS: ../inc/style.css PkgList: debian-astro-maintain...@lists.alioth.debian.org DehsMail:oleb...@debian.org -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/gis][master] gpxviewer 0.5.2 was released 2015-07-18 - drop the unmotivated comment
Andreas Tille pushed to branch master at Debian Blends Team / gis Commits: ca6e7bd5 by Andreas Tille at 2018-03-01T11:31:28+01:00 gpxviewer 0.5.2 was released 2015-07-18 - drop the unmotivated comment - - - - - 1 changed file: - tasks/osm Changes: = tasks/osm = --- a/tasks/osm +++ b/tasks/osm @@ -34,8 +34,6 @@ Depends: python-imposm-parser Depends: gpsprune Depends: gpxviewer -Remark: Last upstream update was 08-May-2012 - Suggests: gpscorrelate, gpscorrelate-gui View it on GitLab: https://salsa.debian.org/blends-team/gis/commit/ca6e7bd5d16ea43bf510a737e35da9e1bc435d3f --- View it on GitLab: https://salsa.debian.org/blends-team/gis/commit/ca6e7bd5d16ea43bf510a737e35da9e1bc435d3f You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] Add r-bioc-impute
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 06dc0993 by Andreas Tille at 2018-03-01T10:46:59+01:00 Add r-bioc-impute - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -859,6 +859,8 @@ Recommends: r-bioc-rtracklayer, r-bioc-gviz, r-bioc-biostrings, r-bioc-annotate, Recommends: r-bioc-deseq2, r-bioc-dnacopy, r-bioc-geneplotter +Recommends: r-bioc-impute + Recommends: r-bioc-mergeomics Recommends: r-bioc-metagenomeseq, r-bioc-phyloseq View it on GitLab: https://salsa.debian.org/blends-team/med/commit/06dc099312d7e97a7e322d4bbdb0295e76db85c9 --- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/06dc099312d7e97a7e322d4bbdb0295e76db85c9 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 20ebb2f6fc9b04788af1b672dd6ec1c2fbdcb0bb
The following commit has been merged in the master branch: commit 20ebb2f6fc9b04788af1b672dd6ec1c2fbdcb0bb Author: Andreas Tille <ti...@debian.org> Date: Thu Mar 1 10:02:14 2018 +0100 Fix some URLs diff --git a/webtools/webconf/debian-accessibility.conf b/webtools/webconf/debian-accessibility.conf index 90bddac..abb4d0f 100644 --- a/webtools/webconf/debian-accessibility.conf +++ b/webtools/webconf/debian-accessibility.conf @@ -2,7 +2,7 @@ Blend: debian-accessibility ProjectName: Debian Accessibility ProjectUrl: https://www.debian.org/devel/debian-accessibility Homepage:https://www.debian.org/devel/debian-accessibility -AliothUrl: https://blends.alioth.debian.org/accessibility +AliothUrl: https://blends.debian.org/accessibility ProjectList: debian-accessibil...@lists.debian.org OutputDir: /srv/blends.debian.org/www/accessibility DataDir: /srv/blends.debian.org/data/accessibility diff --git a/webtools/webconf/debian-imaging.conf b/webtools/webconf/debian-imaging.conf index 297d02b..afeb673 100644 --- a/webtools/webconf/debian-imaging.conf +++ b/webtools/webconf/debian-imaging.conf @@ -1,8 +1,8 @@ Blend: debian-imaging ProjectName: Debian Imaging -ProjectUrl: https://blends.alioth.debian.org/imaging -Homepage:https://blends.alioth.debian.org/imaging -AliothUrl: https://blends.alioth.debian.org/imaging +ProjectUrl: https://blends.debian.org/imaging +Homepage:https://blends.debian.org/imaging +AliothUrl: https://blends.debian.org/imaging ProjectList: ti...@debian.org OutputDir: /srv/blends.debian.org/www/imaging DataDir: /srv/blends.debian.org/data/debian-imaging diff --git a/webtools/webconf/debian-multimedia.conf b/webtools/webconf/debian-multimedia.conf index 6b61cc3..8b3c9f9 100644 --- a/webtools/webconf/debian-multimedia.conf +++ b/webtools/webconf/debian-multimedia.conf @@ -1,8 +1,8 @@ Blend: debian-multimedia ProjectName: Debian Multimedia -ProjectUrl: https://blends.alioth.debian.org/multimedia -Homepage:https://blends.alioth.debian.org/multimedia -AliothUrl: https://blends.alioth.debian.org/multimedia +ProjectUrl: https://blends.debian.org/multimedia +Homepage:https://blends.debian.org/multimedia +AliothUrl: https://blends.debian.org/multimedia ProjectList: debian-multime...@lists.debian.org OutputDir: /srv/blends.debian.org/www/multimedia DataDir: /srv/blends.debian.org/data/multimedia-blends -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/med][master] 2 commits: Add r-cran-phytools
Andreas Tille pushed to branch master at Debian Blends Team / med Commits: 4530e185 by Andreas Tille at 2018-02-23T08:46:18+01:00 Add r-cran-phytools - - - - - d5ec44a6 by Andreas Tille at 2018-02-28T09:07:41+01:00 Add smalr - - - - - 1 changed file: - tasks/bio Changes: = tasks/bio = --- a/tasks/bio +++ b/tasks/bio @@ -353,6 +353,8 @@ Recommends: scythe Recommends: sickle +Recommends: smalr + Recommends: kmc Recommends: king-probe @@ -1925,6 +1927,8 @@ Recommends: coot Recommends: r-cran-ape +Recommends: r-cran-phytools + Recommends: r-cran-treescape Recommends: caftools View it on GitLab: https://salsa.debian.org/blends-team/med/compare/99d32fb224029cc14d4641447ab6b9d8d91b193c...d5ec44a6605ec3060efdde0b23e408eb0fc1e8e3 --- View it on GitLab: https://salsa.debian.org/blends-team/med/compare/99d32fb224029cc14d4641447ab6b9d8d91b193c...d5ec44a6605ec3060efdde0b23e408eb0fc1e8e3 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/science][master] Moved to Salsa
Andreas Tille pushed to branch master at Debian Blends Team / science Commits: e77f3d3b by Andreas Tille at 2018-03-01T09:38:48+01:00 Moved to Salsa - - - - - 3 changed files: - debian/changelog - debian/control - debian/control.stub Changes: = debian/changelog = --- a/debian/changelog +++ b/debian/changelog @@ -1,5 +1,6 @@ debian-science (1.8) UNRELEASED; urgency=medium + [ Drew Parsons ] * Team upload. * Changes in metapackage dependencies -nanoscale-physics @@ -9,6 +10,9 @@ debian-science (1.8) UNRELEASED; urgency=medium removed: Recommends: libblacs-mpi-dev + [ Andreas Tille ] + * Moved to Salsa + -- Drew Parsons <dpars...@debian.org> Tue, 12 Sep 2017 17:34:12 +0800 debian-science (1.7) unstable; urgency=medium = debian/control = --- a/debian/control +++ b/debian/control @@ -7,8 +7,8 @@ Uploaders: Andreas Tille <ti...@debian.org>, Ole Streicher <oleb...@debian.org> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.8 -Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/science.git -Vcs-Git: https://anonscm.debian.org/git/blends/projects/science.git +Vcs-Browser: https://salsa.debian.org/blends-team/science +Vcs-Git: https://salsa.debian.org/blends-team/science.git Homepage: http://wiki.debian.org/DebianScience/ Package: science-tasks = debian/control.stub = --- a/debian/control.stub +++ b/debian/control.stub @@ -6,8 +6,8 @@ Uploaders: Andreas Tille <ti...@debian.org>, Ole Streicher <oleb...@debian.org> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.8 -Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/science.git -Vcs-Git: https://anonscm.debian.org/git/blends/projects/science.git +Vcs-Browser: https://salsa.debian.org/blends-team/science +Vcs-Git: https://salsa.debian.org/blends-team/science.git Homepage: http://wiki.debian.org/DebianScience/ Package: science-tasks View it on GitLab: https://salsa.debian.org/blends-team/science/commit/e77f3d3b17dbbe4102e22a8ccd850f354defaa0d --- View it on GitLab: https://salsa.debian.org/blends-team/science/commit/e77f3d3b17dbbe4102e22a8ccd850f354defaa0d You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/3dprinter][master] 2 commits: add gcode viewer yagv
Andreas Tille pushed to branch master at Debian Blends Team / 3dprinter Commits: 2ab58c25 by Thorsten Alteholz at 2014-07-22T13:30:55+02:00 add gcode viewer yagv - - - - - 745a3c97 by Andreas Tille at 2018-02-28T11:58:22+01:00 Fix Vcs fields - - - - - 4 changed files: - debian/changelog - debian/control - debian/control.stub - tasks/gcode Changes: = debian/changelog = --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +debian-3dprinter (0.2) UNRELEASED; urgency=medium + + * Team upload. + * Fix Vcs fields + + -- Andreas Tille <ti...@debian.org> Wed, 28 Feb 2018 11:58:03 +0100 + debian-3dprinter (0.1) unstable; urgency=low * Initial release. = debian/control = --- a/debian/control +++ b/debian/control @@ -6,9 +6,9 @@ Maintainer: Debian 3dprinter Project <3dprinter-gene...@lists.alioth.debian.org> Uploaders: Thorsten Alteholz <deb...@alteholz.de> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.5 +Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/3dprinter.git +Vcs-Git: https://anonscm.debian.org/git/blends/projects/3dprinter.git Homepage: https://wiki.debian.org/3D-printer -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/3dprinter.git -Vcs-Git: git://anonscm.debian.org/blends/projects/3dprinter.git Package: 3dprinter-tasks Architecture: all = debian/control.stub = --- a/debian/control.stub +++ b/debian/control.stub @@ -5,9 +5,9 @@ Maintainer: Debian 3dprinter Project <3dprinter-gene...@lists.alioth.debian.org> Uploaders: Thorsten Alteholz <deb...@alteholz.de> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.5 +Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/3dprinter.git +Vcs-Git: https://anonscm.debian.org/git/blends/projects/3dprinter.git Homepage: https://wiki.debian.org/3D-printer -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/3dprinter.git -Vcs-Git: git://anonscm.debian.org/blends/projects/3dprinter.git Package: 3dprinter-tasks Architecture: all = tasks/gcode = --- a/tasks/gcode +++ b/tasks/gcode @@ -7,3 +7,5 @@ Depends: octoprint Depends: printrun Depends: gpx + +Depends: yagv View it on GitLab: https://salsa.debian.org/blends-team/3dprinter/compare/2f8af393832270d1f96e86d3b977350781f55321...745a3c97c8143e4f013ae45e3569c9873c8eab27 --- View it on GitLab: https://salsa.debian.org/blends-team/3dprinter/compare/2f8af393832270d1f96e86d3b977350781f55321...745a3c97c8143e4f013ae45e3569c9873c8eab27 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/science][master] 2 commits: Add aseba to robotics task
Andreas Tille pushed to branch master at Debian Blends Team / science Commits: 2f54a4ae by Andreas Tille at 2018-02-17T17:57:23+01:00 Add aseba to robotics task - - - - - 51682514 by Andreas Tille at 2018-02-21T08:52:22+01:00 Add dxf2gcode - - - - - 2 changed files: - tasks/electronics - tasks/robotics Changes: = tasks/electronics = --- a/tasks/electronics +++ b/tasks/electronics @@ -76,6 +76,8 @@ Depends: fpga-icestorm, arachne-pnr Depends: dfcgen-gtk +Depends: dxf2gcode + Depends: vbpp Pkg-URL: http://snapshot.debian.org/package/vbpp/ Homepage: http://www.flex.com/~jching/ = tasks/robotics = --- a/tasks/robotics +++ b/tasks/robotics @@ -205,3 +205,5 @@ Suggests: octave, gnuplot Depends: octomap-tools, octovis + +Recommends: aseba View it on GitLab: https://salsa.debian.org/blends-team/science/compare/b133dde18293564816453398b7f19fa3ed2945b6...516825147fe2190cc5209d71c7715864c0f96677 --- View it on GitLab: https://salsa.debian.org/blends-team/science/compare/b133dde18293564816453398b7f19fa3ed2945b6...516825147fe2190cc5209d71c7715864c0f96677 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 60909abdcf527a29eb2c53f1b993aeb2adcc6bf7
The following commit has been merged in the master branch: commit 60909abdcf527a29eb2c53f1b993aeb2adcc6bf7 Author: Andreas Tille <ti...@debian.org> Date: Thu Mar 1 09:45:00 2018 +0100 Debian Science moved to Salsa diff --git a/webtools/webconf/debian-science.conf b/webtools/webconf/debian-science.conf index 0bf8b4b..32b57b2 100644 --- a/webtools/webconf/debian-science.conf +++ b/webtools/webconf/debian-science.conf @@ -2,11 +2,11 @@ Blend: debian-science ProjectName: Debian Science ProjectUrl: https://wiki.debian.org/DebianScience Homepage:https://wiki.debian.org/DebianScience -AliothUrl: https://alioth.debian.org/projects/debian-science +AliothUrl: https://salsa.debian.org/blends-team/science ProjectList: debian-scie...@lists.debian.org OutputDir: /srv/blends.debian.org/www/science DataDir: /srv/blends.debian.org/data/science -VcsDir: git://anonscm.debian.org/blends/projects/science.git +VcsDir: https://salsa.debian.org/blends-team/science.git CSS: ../inc/style.css PkgList: debian-science-maintain...@lists.alioth.debian.org DehsMail:ti...@debian.org -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 259af00e16e00d6ce7f721d292e2cbc94041dc9b
The following commit has been merged in the master branch: commit 259af00e16e00d6ce7f721d292e2cbc94041dc9b Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 28 13:43:27 2018 +0100 Sanctuary moved to Salsa diff --git a/webtools/webconf/debian-sanctuary.conf b/webtools/webconf/debian-sanctuary.conf index d79dcc0..3a7ddd5 100644 --- a/webtools/webconf/debian-sanctuary.conf +++ b/webtools/webconf/debian-sanctuary.conf @@ -2,12 +2,12 @@ Blend: debian-sanctuary ProjectName: Debian Sanctuary ProjectUrl: https://blends.debian.org/sanctuary/ Homepage:https://wiki.debian.org/DebianSanctuary -AliothUrl: https://www.example.com/ +AliothUrl: https://blends.debian.org/sanctuary/ ProjectList: nolist...@example.com LogoUrl: https://placekitten.com/g/150/150 OutputDir: /srv/blends.debian.org/www/sanctuary DataDir: /srv/blends.debian.org/data/sanctuary -VcsDir: git://anonscm.debian.org/blends/projects/sanctuary.git +VcsDir: https://salsa.debian.org/blends-team/sanctuary.git CSS: ../inc/style.css PkgList: nolist...@example.com DehsMail:i...@fsfe.org -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] hamradio branch, master, updated. debian/0.1-19-g6061134
The following commit has been merged in the master branch: commit 60611349cde1855b0f3e29d201946ea3b98594c5 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 28 12:06:13 2018 +0100 Add missing Vcs-fields diff --git a/debian/control.stub b/debian/control.stub index f8ec8fd..fa45a1e 100644 --- a/debian/control.stub +++ b/debian/control.stub @@ -6,6 +6,8 @@ Uploaders: Iain R. Learmonth <i...@debian.org> Build-Depends-Indep: debhelper (>= 9), blends-dev (>= 0.6.16.4) Standards-Version: 3.9.6 +Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/hamradio.git +Vcs-Git: https://anonscm.debian.org/git/blends/projects/hamradio.git Package: hamradio-tasks Architecture: all -- Packaging for Debian Hamradio Pure Blend ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] 3dprinter branch, master, updated. 745a3c97c8143e4f013ae45e3569c9873c8eab27
The following commit has been merged in the master branch: commit 745a3c97c8143e4f013ae45e3569c9873c8eab27 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 28 11:57:38 2018 +0100 Fix Vcs fields diff --git a/debian/changelog b/debian/changelog index e15dae4..69dd647 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +debian-3dprinter (0.2) UNRELEASED; urgency=medium + + * Team upload. + * Fix Vcs fields + + -- Andreas Tille <ti...@debian.org> Wed, 28 Feb 2018 11:58:03 +0100 + debian-3dprinter (0.1) unstable; urgency=low * Initial release. diff --git a/debian/control b/debian/control index 507ac96..a24de6e 100644 --- a/debian/control +++ b/debian/control @@ -6,9 +6,9 @@ Maintainer: Debian 3dprinter Project <3dprinter-gene...@lists.alioth.debian.org> Uploaders: Thorsten Alteholz <deb...@alteholz.de> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.5 +Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/3dprinter.git +Vcs-Git: https://anonscm.debian.org/git/blends/projects/3dprinter.git Homepage: https://wiki.debian.org/3D-printer -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/3dprinter.git -Vcs-Git: git://anonscm.debian.org/blends/projects/3dprinter.git Package: 3dprinter-tasks Architecture: all diff --git a/debian/control.stub b/debian/control.stub index 233a982..70f07c9 100644 --- a/debian/control.stub +++ b/debian/control.stub @@ -5,9 +5,9 @@ Maintainer: Debian 3dprinter Project <3dprinter-gene...@lists.alioth.debian.org> Uploaders: Thorsten Alteholz <deb...@alteholz.de> Build-Depends-Indep: blends-dev (>= 0.6.15) Standards-Version: 3.9.5 +Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/3dprinter.git +Vcs-Git: https://anonscm.debian.org/git/blends/projects/3dprinter.git Homepage: https://wiki.debian.org/3D-printer -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=blends/projects/3dprinter.git -Vcs-Git: git://anonscm.debian.org/blends/projects/3dprinter.git Package: 3dprinter-tasks Architecture: all -- Packaging for 3dprinter ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, master, updated. 4530e1855b37fbd16eb6566e519b3ea83c047fc7
The following commit has been merged in the master branch: commit 4530e1855b37fbd16eb6566e519b3ea83c047fc7 Author: Andreas Tille <ti...@debian.org> Date: Fri Feb 23 08:46:18 2018 +0100 Add r-cran-phytools diff --git a/tasks/bio b/tasks/bio index fb19237..ef83954 100644 --- a/tasks/bio +++ b/tasks/bio @@ -1925,6 +1925,8 @@ Recommends: coot Recommends: r-cran-ape +Recommends: r-cran-phytools + Recommends: r-cran-treescape Recommends: caftools -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][debian-gis-team/opencpn][master] 2 commits: Update upstream source from tag 'upstream/2.5.0+dfsg'
Andreas Tille pushed to branch master at Debian GIS Project / opencpn Commits: 48840a5c by Andreas Tille at 2018-02-22T19:14:01+01:00 Update upstream source from tag upstream/2.5.0+dfsg Update to upstream version 2.5.0+dfsg with Debian dir 3b92806038095365ef9ba84aca8b6a9b6874a68e - - - - - 0b2edd73 by Andreas Tille at 2018-02-22T19:19:40+01:00 Moved from SVN to Git - - - - - 30 changed files: - + debian/README.Debian - + debian/README.harmonics - + debian/README.lucid - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/menu - + debian/opencpn-data.dirs - + debian/opencpn-data.docs - + debian/opencpn-data.install - + debian/opencpn-doc.dirs - + debian/opencpn-doc.doc-base - + debian/opencpn-doc.docs - + debian/opencpn-doc.install - + debian/opencpn-plugins.dirs - + debian/opencpn-plugins.install - + debian/opencpn.1 - + debian/opencpn.dirs - + debian/opencpn.docs - + debian/opencpn.install - + debian/opencpn.manpages - + debian/patches/allow_harden_plugins.patch - + debian/patches/backport_libgps20_support.patch - + debian/patches/ref_debian_doc_dir.patch - + debian/patches/ref_debian_gpl2.patch - + debian/patches/series - + debian/patches/use_pkg_tinyxml.patch - + debian/patches/use_xtide_coastline.patch - + debian/rules The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/debian-gis-team/opencpn/compare/81e9eb9c3e652e7d7a5b00b9eba8e379f71400eb...0b2edd7339f86a5348de47481a549600766406c4 --- View it on GitLab: https://salsa.debian.org/debian-gis-team/opencpn/compare/81e9eb9c3e652e7d7a5b00b9eba8e379f71400eb...0b2edd7339f86a5348de47481a549600766406c4 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/pan][master] 2 commits: add diffraction task
Andreas Tille pushed to branch master at Blends / pan Commits: f6fec546 by Picca Frédéric-Emmanuel at 2015-04-04T15:43:46+02:00 add diffraction task - - - - - d053f45a by Andreas Tille at 2018-02-22T16:01:54+01:00 Fix typos - - - - - 3 changed files: - tasks/coherent-diffraction - + tasks/diffraction - tasks/mx Changes: = tasks/coherent-diffraction = --- a/tasks/coherent-diffraction +++ b/tasks/coherent-diffraction @@ -3,7 +3,7 @@ Description: coherent diffraction software This metapackage will install PAN Blend coherent diffraction packages. Comment: Improve the Description -Suggest: bonsu +Suggests: bonsu Homepage: http://code.google.com/p/bonsu/ License: GPL3+ Pkg-Description: phase retrieval software package for real-time visualisation = tasks/diffraction = --- /dev/null +++ b/tasks/diffraction @@ -0,0 +1,12 @@ +Task: diffraction +Description: diffraction software suit + This metapackage will install all diffraction softwares +Comment: Improve the description + +Suggests: nebula +Homepage: https://github.com/Natnux/nebula +License: GPL-2+ +Pkg-Description: three-dimensional reciprocal space visualization. + an open tool for X-ray scientists to interactively reconstruct and + visualize diffuse scattering in three-dimensional reciprocal + space. Programmed in C++ using Qt, OpenCL, and OpenGL. \ No newline at end of file = tasks/mx = --- a/tasks/mx +++ b/tasks/mx @@ -896,7 +896,7 @@ Comment: ? Depends: povray -Suggest: powder +Suggests: powder Homepage: ? License: ? Pkg-Description: ? View it on GitLab: https://salsa.debian.org/blends-team/pan/compare/323f323fca8398e5bab17710417cca6c6eadd2fa...d053f45a61d9d648885fbc64fb41e94465a54c4b --- View it on GitLab: https://salsa.debian.org/blends-team/pan/compare/323f323fca8398e5bab17710417cca6c6eadd2fa...d053f45a61d9d648885fbc64fb41e94465a54c4b You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends-images][master] 2 commits: Updated changelog for release
Andreas Tille pushed to branch master at Blends / blends-images Commits: ca56421d by Iain R. Learmonth at 2015-09-01T13:44:03+01:00 Updated changelog for release - - - - - 88e50526 by Iain R. Learmonth at 2015-09-09T23:35:21+01:00 Updated the nvidia driver package list - - - - - 3 changed files: - debian/changelog - debian/control - images/hamradio/config/package-lists/dkms.list.chroot_install Changes: = debian/changelog = --- a/debian/changelog +++ b/debian/changelog @@ -1,5 +1,5 @@ -blends-images (0.1) UNRELEASED; urgency=medium +blends-images (0.1) unstable; urgency=medium - * Initial release. (Closes: #XX) + * Initial release. (Closes: #797658) - -- Iain R. Learmonth <i...@fsfe.org> Fri, 05 Dec 2014 17:00:21 + + -- Iain R. Learmonth <i...@debian.org> Tue, 01 Sep 2015 13:32:54 +0100 = debian/control = --- a/debian/control +++ b/debian/control @@ -2,7 +2,7 @@ Source: blends-images Section: misc Priority: optional Maintainer: Debian Pure Blend Team <debian-ble...@lists.debian.org> -Uploaders: Iain R. Learmonth <i...@fsfe.org> +Uploaders: Iain R. Learmonth <i...@debian.org> Build-Depends: debhelper (>= 9), devscripts Standards-Version: 3.9.6 Homepage: http://blends.debian.org/live/ = images/hamradio/config/package-lists/dkms.list.chroot_install = --- a/images/hamradio/config/package-lists/dkms.list.chroot_install +++ b/images/hamradio/config/package-lists/dkms.list.chroot_install @@ -12,7 +12,7 @@ pciutils # nvidia-graphics-drivers nvidia-kernel-dkms - nvidia-glx + nvidia-driver xserver-xorg-video-nvidia nvidia-settings nvidia-xconfig View it on GitLab: https://salsa.debian.org/blends-team/blends-images/compare/416fad00874e66dc1495ce8a66db8e8696f2d791...88e5052670f50c8413be71143060aa2a350ea30b --- View it on GitLab: https://salsa.debian.org/blends-team/blends-images/compare/416fad00874e66dc1495ce8a66db8e8696f2d791...88e5052670f50c8413be71143060aa2a350ea30b You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/blends-gsoc][master] 2 commits: cme fix dpkg-control
Andreas Tille pushed to branch master at Blends / blends-gsoc
Commits:
5c2d2168 by Andreas Tille at 2014-07-28T13:42:54+02:00
cme fix dpkg-control
- - - - -
97b0c4da by Andreas Tille at 2016-11-09T15:32:46+01:00
cme fix dpkg-control
- - - - -
1 changed file:
- debian/control
Changes:
=
debian/control
=
--- a/debian/control
+++ b/debian/control
@@ -1,15 +1,16 @@
Source: blends-dev
-Priority: optional
-Section: devel
Maintainer: Emmanouil Kiagias <e.kiag...@gmail.com>
-Build-Depends: debhelper (>= 9), python
-Standards-Version: 3.9.4
-Vcs-Browser: http://git.debian.org/?p=blends/blends-gsoc.git
-Vcs-Git: git://git.debian.org/git/blends/blends-gsoc.git
+Section: devel
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ python
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/cgit/blends/blends-gsoc.git
+Vcs-Git: https://anonscm.debian.org/git/blends/blends-gsoc.git
Package: blends-dev
Architecture: all
-Depends: debconf (>= 0.5) | debconf-2.0,
+Depends: debconf | debconf-2.0,
make | build-essential,
${misc:Depends},
${python:Depends}
@@ -19,4 +20,4 @@ Description: Debian Pure Blends common files for developing
metapackages
This package makes life easier when packaging metapackages. Perhaps
this will also encourage other people to build metapackages if there are
easy to use templates where only the packages, the metapackage is depending
- from, to insert into the right place.
\ No newline at end of file
+ from, to insert into the right place.
View it on GitLab:
https://salsa.debian.org/blends-team/blends-gsoc/compare/f2208d3e02c1b2e75e6eb804e01e5ecdd5cb67ba...97b0c4dab4d122e422a16eddb09d6731cc710fcc
---
View it on GitLab:
https://salsa.debian.org/blends-team/blends-gsoc/compare/f2208d3e02c1b2e75e6eb804e01e5ecdd5cb67ba...97b0c4dab4d122e422a16eddb09d6731cc710fcc
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[Blends-commit] [Git][blends-team/publications][master] 2 commits: Final polishing
Andreas Tille pushed to branch master at Blends / publications Commits: e335fb5e by Andreas Tille at 2013-04-24T10:10:15+02:00 Final polishing - - - - - 432f75b7 by Andreas Tille at 2013-04-24T10:10:47+02:00 What started in March was finished in April ... - - - - - 1 changed file: - bits/2013-03_bits → bits/2013-04_bits Changes: = bits/2013-03_bits → bits/2013-04_bits = --- a/bits/2013-03_bits +++ b/bits/2013-04_bits @@ -55,13 +55,13 @@ After realising that sponsoring in some Blends teams does not work ([1], under what circumstance I will sponsor packages of any Blends scope. 1. Has confirmed to have understood the Blends principle - 2. Your package is maintained in a VCS used by the Blends team + 2. Package is maintained in a VCS used by the Blends team 3. Package is listed on the Blends tasks pages (which is either because the package is inside Debian or in any Blends VCS) 4. Unable to find a Sponsor on the Blends list even after posting there at least twice -If these conditions are fullfilled I try to do my best to get your +If these conditions are fullfilled I try to do my best to get the package sponsored. Any other Blends related sponsors joining this effort are welcome for sure. @@ -101,6 +101,8 @@ metapackages for Wheezy. Thanks for all people who worked on the Blends tasks to enable the metapackages reflect the current set of packages inside the Debian pool. +Not to forget: thanks to the patience of the release team for their extra +effort to accept the metapackages. 7. What can you do for the Wheezy user experience right now View it on GitLab: https://salsa.debian.org/blends-team/publications/compare/6c39aae2608cdcc5d45ed0a21ad44966e09fd1b0...432f75b7086cf9c801123031016dde19faa0cffa --- View it on GitLab: https://salsa.debian.org/blends-team/publications/compare/6c39aae2608cdcc5d45ed0a21ad44966e09fd1b0...432f75b7086cf9c801123031016dde19faa0cffa You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/debug][master] 2 commits: Adapt Vcs fields
Andreas Tille pushed to branch master at Blends / debug Commits: 18f9efb4 by Andreas Tille at 2018-02-21T17:23:47+01:00 Adapt Vcs fields - - - - - 68149169 by Andreas Tille at 2018-02-21T21:18:16+01:00 Add more files from former fun repository - - - - - 5 changed files: - + Makefile - + debian/changelog - + debian/compat - debian/control.stub - + debian/rules Changes: = Makefile = --- /dev/null +++ b/Makefile @@ -0,0 +1,13 @@ +#!/usr/bin/make -f + +BLENDMAKEFILE=/usr/share/blends-dev/Makefile + +CheckBLENDMakefile := $(shell if [ -e $(BLENDMAKEFILE) ] ; then echo 1 ; else echo 0 ; fi) +ifeq ($(CheckBLENDMakefile),1) +include $(BLENDMAKEFILE) +else +err := $(shell echo "$(BLENDMAKEFILE) is missing. Please install blends-dev package!") +endif + +dummy: + @echo $(err) = debian/changelog = --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +debian-debug (0.0.1) unstable; urgency=low + + * Never intended to be released + + -- Andreas Tille <ti...@debian.org> Mon, 01 Apr 2013 00:00:17 +0200 = debian/compat = --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 = debian/control.stub = --- a/debian/control.stub +++ b/debian/control.stub @@ -1,12 +1,11 @@ -Source: debug +Source: debian-debug Section: misc Priority: extra Maintainer: Somebody who wants to debug blends stuff <ti...@debian.org> Build-Depends: debhelper (>= 6.0.7), cdd-dev (>= 0.5.4) Standards-Version: 3.8.1 -Vcs-Browser: http://svn.debian.org/wsvn/debian-edu/trunk/src/debian-edu/?rev=0=0 -Vcs-Svn: svn://svn.debian.org/debian-edu/trunk/src/debian-edu/ -Homepage: http://www.skolelinux.org +Vcs-Browser: https://salsa.debian.org/blends-team/debug +Vcs-Git: https://salsa.debian.org/blends-team/debug.git Package: debug-tasks Architecture: any = debian/rules = --- /dev/null +++ b/debian/rules @@ -0,0 +1,3 @@ +#!/usr/bin/make -f + +include /usr/share/blends-dev/rules View it on GitLab: https://salsa.debian.org/blends-team/debug/compare/1b7028284954590781ab4f7ea4a76f52d885e58d...68149169c2a37d4be4330a5d27dfbebd60f2bf74 --- View it on GitLab: https://salsa.debian.org/blends-team/debug/compare/1b7028284954590781ab4f7ea4a76f52d885e58d...68149169c2a37d4be4330a5d27dfbebd60f2bf74 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [Git][blends-team/imaging][master] 2 commits: Keep record of python-libtiff
Andreas Tille pushed to branch master at Blends / imaging Commits: a7c7b591 by Andreas Tille at 2013-12-14T08:27:13+00:00 Keep record of python-libtiff - - - - - a995517b by Andreas Tille at 2018-02-21T17:17:47+01:00 Fix Vcs fields - - - - - 2 changed files: - debian/control.stub - tasks/imaging-dev Changes: = debian/control.stub = --- a/debian/control.stub +++ b/debian/control.stub @@ -4,5 +4,5 @@ Priority: extra Maintainer: Andreas Tille <ti...@debian.org> Build-Depends-Indep: debhelper, blends-dev (>= 0.6.15) Standards-Version: 3.9.3 -Vcs-Browser: http://svn.debian.org/wsvn/blends/projects/imaging/trunk/debian-imaging/ -Vcs-Svn: svn://svn.debian.org/blends/projects/imaging/trunk/debian-imaging/ +Vcs-Browser: https://salsa.debian.org/blends-team/imaging +Vcs-Git: https://salsa.debian.org/blends-team/imaging.git = tasks/imaging-dev = --- a/tasks/imaging-dev +++ b/tasks/imaging-dev @@ -4,3 +4,5 @@ Description: Libraries useful for imaging development digital images. Here you can have an overview. Depends: libjai-imageio-core-java, cimg-dev + +Depends: python-libtiff View it on GitLab: https://salsa.debian.org/blends-team/imaging/compare/25966b2c686eaec02ae11b9dda21576ea6c1d15c...a995517bd57af4d452b6cef10d4a8f3daec3c4a2 --- View it on GitLab: https://salsa.debian.org/blends-team/imaging/compare/25966b2c686eaec02ae11b9dda21576ea6c1d15c...a995517bd57af4d452b6cef10d4a8f3daec3c4a2 You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, historic, updated. 6c0b338c229d6163381015383ea1a8ab646c33e2
The following commit has been merged in the historic branch:
commit 6c0b338c229d6163381015383ea1a8ab646c33e2
Author: Andreas Tille <ti...@debian.org>
Date: Wed Feb 21 14:36:11 2018 +0100
Commit status of 0.8.9
diff --git a/VERSION b/VERSION
index ee94dd8..55485e1 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-0.8.3
+0.8.9
diff --git a/common/control b/common/control
index e7ee8b3..ae08a83 100644
--- a/common/control
+++ b/common/control
@@ -1,6 +1,6 @@
Package: med-common
Architecture: all
-Depends: adduser, debconf (>= 1.2), menu, cdd-common (>= 0.3.2)
+Depends: adduser, debconf (>= 1.2), menu, cdd-common (>= 0.3.3)
Description: Debian-Med Project common package
This package builds the basic infra structure of all med-* packages.
.
diff --git a/debian/changelog b/debian/changelog
index 95f3f6a..7100a02 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+debian-med (0.8.9) experimental; urgency=low
+
+ * New upstream version which now uses the features of cdd-dev 0.3.9
+ * Exclude .svn dirs in dist target of debian/rules
+
+ -- Andreas Tille <ti...@debian.org> Fri, 16 Jul 2004 11:33:21 +0200
+
debian-med (0.8.3) unstable; urgency=high
* Rebuilded again against cdd-dev 0.3.4 which really closes the
diff --git a/debian/control b/debian/control
index 9a567be..6faaf9f 100644
--- a/debian/control
+++ b/debian/control
@@ -2,12 +2,12 @@ Source: debian-med
Section: misc
Priority: extra
Maintainer: Andreas Tille <ti...@debian.org>
-Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.4)
+Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.9)
Standards-Version: 3.6.1
Package: med-common
Architecture: all
-Depends: adduser, ${misc:Depends}, menu, cdd-common (>= 0.3.2)
+Depends: adduser, ${misc:Depends}, menu (>= 2.1.14), cdd-common (>= 0.3.9)
Description: Debian-Med Project common package
This package builds the basic infra structure of all med-* packages.
.
@@ -18,7 +18,7 @@ Description: Debian-Med Project common package
Package: med-bio
Architecture: all
-Depends: blast2, boxshade, bugsx, fastdnaml, fastlink, garlic, ghemical,
hmmer, loki, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, njplot, pymol,
r-cran-qtl, rasmol, readseq, tigr-glimmer, tree-puzzle, med-common (>=
${binary:Version})
+Depends: med-common (= ${binary:Version}), blast2, boxshade, bugsx, fastdnaml,
fastlink, garlic, ghemical, hmmer, loki, ncbi-epcr, ncbi-tools-bin,
ncbi-tools-x11, njplot, pymol, r-cran-qtl, rasmol, readseq, tigr-glimmer,
tree-puzzle
Suggests: clustalw, clustalw-mpi, clustalx, molphy, phylip, seaview, treetool
Description: Debian-Med micro-biology packages
This meta package will install micro-biology related Debian packages
@@ -26,30 +26,29 @@ Description: Debian-Med micro-biology packages
Package: med-bio-dev
Architecture: all
-Depends: bioperl, libncbi6-dev, libvibrant6-dev, mcl, med-common (>=
${binary:Version})
-Suggests: biomode, r-base-core
+Depends: med-common (= ${binary:Version}), bioperl, libncbi6-dev,
libvibrant6-dev, mcl
+Suggests: biomode, r-base
Description: Debian-Med packages for development of micro-biology applications
This meta package will install Debian packages which might be helpful
for development of applications for micro-biological research.
Package: med-cms
Architecture: all
-Depends: zope-zms, med-common (>= ${binary:Version})
+Depends: med-common (= ${binary:Version}), zope-zms
Description: Debian-Med content management systems
This meta package will install packages which are useful to build a
content management system for medical care.
Package: med-dent
Architecture: all
-Depends: mozilla-browser, med-common (>= ${binary:Version})
-Suggests: debconf (>= 1.2), debianutils (>= 2.6.2), www-browser
+Depends: med-common (= ${binary:Version}), debconf (>= 1.2), debianutils (>=
2.6.2), mozilla-browser | www-browser
Description: Debian-Med package for dental practice client
This meta package will configure your system to act as client for the
OdontoLinux server which provides a system for managing a dental practice.
Package: med-imaging
Architecture: all
-Depends: ctn, ctsim, medcon, minc-tools, paul, xmedcon, med-common (>=
${binary:Version})
+Depends: med-common (= ${binary:Version}), ctn, ctsim, medcon, minc-tools,
paul, xmedcon
Suggests: imagemagick
Description: Debian-Med imaging packages
This meta package will install Debian packages which might be useful in
medical
@@ -57,14 +56,14 @@ Description: Debian-Med imaging packages
Package: med-imaging-dev
Architecture: all
-Depends: ctn-dev, libgtkimreg-dev, libmdc2-dev, libminc0-dev, med-common (>=
${binary:Version})
+Depends: med-common (= ${binary:Version}), ctn-dev, libgtkimreg-dev,
libmdc2-dev, libminc0-dev
Description: Debian-Med packages for medical image development
- This meta package will install Debian packages which might be useful
+ This
[Blends-commit] [Git][blends-team/accessibility][master] 2 commits: replace cups-braille with cups-filters
Andreas Tille pushed to branch master at Blends / accessibility Commits: 507de2cc by Samuel Thibault at 2017-05-01T17:18:19+00:00 replace cups-braille with cups-filters - - - - - ae5cd8c4 by Andreas Tille at 2018-02-21T16:33:02+01:00 Adapt Vcs fields to new location - - - - - 3 changed files: - debian/control.stub - tasks/braille - tasks/documents Changes: = debian/control.stub = --- a/debian/control.stub +++ b/debian/control.stub @@ -5,5 +5,5 @@ Maintainer: Debian Accessibility Project <debian-accessibil...@lists.debian.org> Uploaders: Andreas Tille <ti...@debian.org> Build-Depends-Indep: debhelper, blends-dev (>= 0.6.1) Standards-Version: 3.9.3 -Vcs-Browser: http://svn.debian.org/wsvn/blends/projects/accessibility/trunk/debian-accessibility/ -Vcs-Svn: svn://svn.debian.org/blends/projects/accessibility/trunk/debian-accessibility/ +Vcs-Browser: https://salsa.debian.org/blends-team/accessibility +Vcs-Git: https://salsa.debian.org/blends-team/accessibility.git = tasks/braille = --- a/tasks/braille +++ b/tasks/braille @@ -33,6 +33,6 @@ Pkg-Description: Braille typesetting program Recommends: tuxtype -Recommends: cups-braille +Recommends: cups-filters Suggests: printer-driver-indexbraille = tasks/documents = --- a/tasks/documents +++ b/tasks/documents @@ -6,5 +6,3 @@ Description: Debian Accessibility Helpers for documents Recommends: accessodf Recommends: fonts-opendyslexia - -Recommends: cups-filters View it on GitLab: https://salsa.debian.org/blends-team/accessibility/compare/6e4a1bda9731950fecd061d4db189e0d6981485f...ae5cd8c415582147f4eef4cb17ec6280dda094cb --- View it on GitLab: https://salsa.debian.org/blends-team/accessibility/compare/6e4a1bda9731950fecd061d4db189e0d6981485f...ae5cd8c415582147f4eef4cb17ec6280dda094cb You're receiving this email because of your account on salsa.debian.org. ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. f87fcc8df6cba82c189c825f0c2c7566c44aa14f
The following commit has been merged in the master branch: commit f87fcc8df6cba82c189c825f0c2c7566c44aa14f Author: Andreas Tille <ti...@debian.org> Date: Thu Feb 22 16:03:38 2018 +0100 PAN was moved to Salsa diff --git a/webtools/webconf/debian-pan.conf b/webtools/webconf/debian-pan.conf index acf9b2f..cf93ad8 100644 --- a/webtools/webconf/debian-pan.conf +++ b/webtools/webconf/debian-pan.conf @@ -2,11 +2,11 @@ Blend: debian-pan ProjectName: PAN Blend ProjectUrl: https://wiki.debian.org/SynchrotronRadiationSoftware Homepage:https://wiki.debian.org/SynchrotronRadiationSoftware -AliothUrl: https://alioth.debian.org/projects/debian-science +AliothUrl: https://blends.debian.org/pan ProjectList: debian-scie...@lists.debian.org OutputDir: /srv/blends.debian.org/www/pan DataDir: /srv/blends.debian.org/data/pan -VcsDir: git://git.debian.org/git/blends/projects/pan.git +VcsDir: https://salsa.debian.org/blends-team/pan.git CSS: ../inc/style.css PkgList: debian-science-maintain...@lists.alioth.debian.org DehsMail:ti...@debian.org -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. e58f1379fbfce586c5afe1c59fc4508f664feabb
The following commit has been merged in the master branch: commit e58f1379fbfce586c5afe1c59fc4508f664feabb Author: Andreas Tille <ti...@debian.org> Date: Thu Feb 22 15:36:43 2018 +0100 Debian Junior moved to Salsa diff --git a/webtools/webconf/debian-junior.conf b/webtools/webconf/debian-junior.conf index 6452247..6ec72da 100644 --- a/webtools/webconf/debian-junior.conf +++ b/webtools/webconf/debian-junior.conf @@ -2,11 +2,11 @@ Blend: debian-junior ProjectName: Debian Junior ProjectUrl: https://wiki.debian.org/Teams/DebianJr Homepage:https://www.debian.org/devel/debian-jr -AliothUrl: https://blends.alioth.debian.org/projects/debian-jr +AliothUrl: https://blends.debian.org/junior ProjectList: debian-jun...@lists.debian.org OutputDir: /srv/blends.debian.org/www/junior DataDir: /srv/blends.debian.org/data/junior -VcsDir: git://git.debian.org/git/debianjr/debian-junior.git +VcsDir: https://salsa.debian.org/blends-team/junior.git CSS: ../inc/style.css PkgList: debian...@lists.debian.org Distribution: Debian -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. d010ff26c6d5796f2356f6aec39b35d99166ebdc
The following commit has been merged in the master branch:
commit d010ff26c6d5796f2356f6aec39b35d99166ebdc
Author: Andreas Tille <ti...@debian.org>
Date: Wed Feb 21 17:28:20 2018 +0100
Lex and debug moved to Salsa; rename fun to debug
diff --git a/webtools/update-all-bugs b/webtools/update-all-bugs
index 9b62fe8..9e9815e 100755
--- a/webtools/update-all-bugs
+++ b/webtools/update-all-bugs
@@ -1,7 +1,7 @@
#!/bin/sh
runscript=`basename $0 | sed 's/^update-all-//'`
mkdir -p logs
-for blend in `ls webconf/*.conf | grep -v -e "webconf/fun\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
+for blend in `ls webconf/*.conf | grep -v -e "webconf/debug\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
# if [ "$blend" != "debian-edu" ] ; then
starttime=`date "+%s"`
# time
diff --git a/webtools/update-all-tasks b/webtools/update-all-tasks
index 1bb7b93..6cdfce8 100755
--- a/webtools/update-all-tasks
+++ b/webtools/update-all-tasks
@@ -56,7 +56,7 @@ fi
cd `dirname $0`
mkdir -p logs
-for blend in `ls webconf/*.conf | grep -v -e "webconf/fun\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
+for blend in `ls webconf/*.conf | grep -v -e "webconf/debug\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
starttime=`date "+%s"`
# time
./tasks.py $blend 2> logs/${blend}.err > logs/${blend}.out
diff --git a/webtools/update-all-tasks_udd b/webtools/update-all-tasks_udd
index c3e0134..a04183a 100755
--- a/webtools/update-all-tasks_udd
+++ b/webtools/update-all-tasks_udd
@@ -56,7 +56,7 @@ fi
cd `dirname $0`
mkdir -p logs
-for blend in `ls webconf/*.conf | grep -v -e "webconf/fun\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
+for blend in `ls webconf/*.conf | grep -v -e "webconf/debug\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
starttime=`date "+%s"`
# time
./tasks_udd.py $blend 2> logs/${blend}.err > logs/${blend}.out
diff --git a/webtools/update-all-thermometers b/webtools/update-all-thermometers
index 7a065eb..07bf7ee 100755
--- a/webtools/update-all-thermometers
+++ b/webtools/update-all-thermometers
@@ -1,5 +1,5 @@
#!/bin/sh
mkdir -p logs
-for blend in `ls webconf/*.conf | grep -v -e "webconf/fun\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
+for blend in `ls webconf/*.conf | grep -v -e "webconf/debug\." -e rest-test |
sed 's?webconf/\(.*\)\.conf?\1?'` ; do
./thermometer.py $blend 2> logs/${blend}_thermometer.err >
logs/${blend}_thermometer.out
done
diff --git a/webtools/webconf/debian-lex.conf b/webtools/webconf/debian-lex.conf
index 9a4483f..036e9b8 100644
--- a/webtools/webconf/debian-lex.conf
+++ b/webtools/webconf/debian-lex.conf
@@ -6,7 +6,7 @@ AliothUrl: https://blends.alioth.debian.org/lex
ProjectList: debian-...@lists.debian.org
OutputDir: /srv/blends.debian.org/www/lex
DataDir: /srv/blends.debian.org/data/lex
-VcsDir: svn://anonscm.debian.org/svn/blends/projects/lex/trunk/debian-lex
+VcsDir: https://salsa.debian.org/blends-team/lex.git
CSS: ../inc/style.css
PkgList: debian-...@lists.debian.org
Distribution: Debian
diff --git a/webtools/webconf/fun.conf b/webtools/webconf/debug.conf
similarity index 70%
rename from webtools/webconf/fun.conf
rename to webtools/webconf/debug.conf
index bc19c66..f75207a 100644
--- a/webtools/webconf/fun.conf
+++ b/webtools/webconf/debug.conf
@@ -1,12 +1,12 @@
Blend: fun
ProjectName: Debian Fun
-ProjectUrl: https://blends.debian.net/fun
-Homepage:https://blends.debian.net/fun
+ProjectUrl: https://blends.debian.net/debug
+Homepage:https://blends.debian.net/debug
AliothUrl: https://alioth.debian.org/projects/blends
ProjectList: n...@lists.debian.org
OutputDir: /srv/blends.debian.org/www/fun
DataDir: /srv/blends.debian.org/data/fun
-VcsDir: git://git.debian.org/git/blends/projects/fun.git
+VcsDir: https://salsa.debian.org/blends-team/debug.git
CSS: ../inc/style.css
PkgList: til...@gmail.com
LogoUrl: https://fam-tille.de/island/winter/0211/baden.gif
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[Blends-commit] [SCM] website branch, master, updated. fa90f8a095ca7765fb8f500f552b3115c00bcfa6
The following commit has been merged in the master branch: commit fa90f8a095ca7765fb8f500f552b3115c00bcfa6 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 16:56:54 2018 +0100 Moved imaging stuff to Salsa diff --git a/webtools/webconf/debian-imaging.conf b/webtools/webconf/debian-imaging.conf index 0c1009f..297d02b 100644 --- a/webtools/webconf/debian-imaging.conf +++ b/webtools/webconf/debian-imaging.conf @@ -6,7 +6,7 @@ AliothUrl: https://blends.alioth.debian.org/imaging ProjectList: ti...@debian.org OutputDir: /srv/blends.debian.org/www/imaging DataDir: /srv/blends.debian.org/data/debian-imaging -VcsDir: svn://anonscm.debian.org/svn/blends/projects/imaging/trunk/debian-imaging +VcsDir: https://salsa.debian.org/blends-team/imaging.git CSS: ../inc/style.css PkgList: ti...@debian.org Distribution: test -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 857d001134100ce4f603c1b80a86109296aa9f25
The following commit has been merged in the master branch: commit 857d001134100ce4f603c1b80a86109296aa9f25 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 16:35:51 2018 +0100 Accessibility was moved to Salsa diff --git a/webtools/webconf/debian-accessibility.conf b/webtools/webconf/debian-accessibility.conf index eced0de..90bddac 100644 --- a/webtools/webconf/debian-accessibility.conf +++ b/webtools/webconf/debian-accessibility.conf @@ -2,11 +2,11 @@ Blend: debian-accessibility ProjectName: Debian Accessibility ProjectUrl: https://www.debian.org/devel/debian-accessibility Homepage:https://www.debian.org/devel/debian-accessibility -AliothUrl: https://alioth.debian.org/projects/accessibility +AliothUrl: https://blends.alioth.debian.org/accessibility ProjectList: debian-accessibil...@lists.debian.org OutputDir: /srv/blends.debian.org/www/accessibility DataDir: /srv/blends.debian.org/data/accessibility -VcsDir: svn://anonscm.debian.org/svn/blends/projects/accessibility/trunk/debian-accessibility +VcsDir: https://salsa.debian.org/blends-team/accessibility.git CSS: ../inc/style.css PkgList: debian-accessibil...@lists.debian.org Distribution: Debian -- Static and dynamic websites for Debian Pure Blends ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/1.13.2, created. 8b6bf0dffa777c82f511b66fd673a0484f62067e
The tag, debian/1.13.2 has been created at 8b6bf0dffa777c82f511b66fd673a0484f62067e (commit) - Shortlog commit 8b6bf0dffa777c82f511b66fd673a0484f62067e Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:37:50 2018 +0100 Commit status of 1.13.2 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, releases_1.13.2, created. 8b6bf0dffa777c82f511b66fd673a0484f62067e
The branch, releases_1.13.2 has been created at 8b6bf0dffa777c82f511b66fd673a0484f62067e (commit) - Shortlog commit 8b6bf0dffa777c82f511b66fd673a0484f62067e Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:37:50 2018 +0100 Commit status of 1.13.2 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, historic, updated. 6c0b338c229d6163381015383ea1a8ab646c33e2
The following commit has been merged in the historic branch: commit 5adb6010fe4ff981059a50c4bcfd3f9a44b37711 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:32:46 2018 +0100 Commit status of 0.8.3 diff --git a/VERSION b/VERSION index 100435b..ee94dd8 100644 --- a/VERSION +++ b/VERSION @@ -1 +1 @@ -0.8.2 +0.8.3 diff --git a/debian/changelog b/debian/changelog index b1c29ba..95f3f6a 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,11 @@ +debian-med (0.8.3) unstable; urgency=high + + * Rebuilded again against cdd-dev 0.3.4 which really closes the +mentioned bug. + * Urgency set to high because it *really* fixes a grave bug. + + -- Andreas Tille <ti...@debian.org> Thu, 15 Jul 2004 10:59:25 +0200 + debian-med (0.8.2) unstable; urgency=high * Rebuilded with cdd-dev 0.3.3 which closes a grave bug (which diff --git a/debian/control b/debian/control index 3e32254..9a567be 100644 --- a/debian/control +++ b/debian/control @@ -2,7 +2,7 @@ Source: debian-med Section: misc Priority: extra Maintainer: Andreas Tille <ti...@debian.org> -Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.3) +Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.4) Standards-Version: 3.6.1 Package: med-common diff --git a/debian/control.stub b/debian/control.stub index 2721be8..1ee54b3 100644 --- a/debian/control.stub +++ b/debian/control.stub @@ -2,7 +2,7 @@ Source: debian-med Section: misc Priority: extra Maintainer: Andreas Tille <ti...@debian.org> -Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.3) +Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.4) Standards-Version: 3.6.1 Package: med -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, historic, updated. 6c0b338c229d6163381015383ea1a8ab646c33e2
The following commit has been merged in the historic branch:
commit d877e5abcc3eca83eb0c898adf6581cf556e8111
Author: Andreas Tille <ti...@debian.org>
Date: Wed Feb 21 14:32:07 2018 +0100
Status of release 0.8.2
diff --git a/VERSION b/VERSION
index aec258d..100435b 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-0.8
+0.8.2
diff --git a/debian/changelog b/debian/changelog
index 692ce32..b1c29ba 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,14 @@
+debian-med (0.8.2) unstable; urgency=high
+
+ * Rebuilded with cdd-dev 0.3.3 which closes a grave bug (which
+was reassigned to cdd-dev and thus it is not closed in this
+changelog).
+ * Please make sure that all ${HOME}/.menu/cdd-menu files or
+${HOME}/.menu/med-* files are removed - they will not be
+needed any more.
+
+ -- Andreas Tille <ti...@debian.org> Wed, 14 Jul 2004 21:42:24 +0200
+
debian-med (0.8.1) unstable; urgency=low
* Adjust versioned dependency of med-common from cdd-common
diff --git a/debian/control b/debian/control
index 8c9abfe..3e32254 100644
--- a/debian/control
+++ b/debian/control
@@ -2,7 +2,7 @@ Source: debian-med
Section: misc
Priority: extra
Maintainer: Andreas Tille <ti...@debian.org>
-Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.2)
+Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.3)
Standards-Version: 3.6.1
Package: med-common
diff --git a/debian/control.stub b/debian/control.stub
index a6c819f..2721be8 100644
--- a/debian/control.stub
+++ b/debian/control.stub
@@ -2,7 +2,7 @@ Source: debian-med
Section: misc
Priority: extra
Maintainer: Andreas Tille <ti...@debian.org>
-Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.2)
+Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.3)
Standards-Version: 3.6.1
Package: med
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[Blends-commit] [SCM] med tag, debian/0.8.1, created. a55a5ddad2f8a9e456d2aa208269fa4f7e7bdf2a
The tag, debian/0.8.1 has been created at a55a5ddad2f8a9e456d2aa208269fa4f7e7bdf2a (commit) - Shortlog commit a55a5ddad2f8a9e456d2aa208269fa4f7e7bdf2a Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:31:33 2018 +0100 Commit status of 0.8.1 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, historic, updated. 6c0b338c229d6163381015383ea1a8ab646c33e2
The following commit has been merged in the historic branch:
commit b0a51476449d07638c4fd4f3beca147e9902a985
Author: Andreas Tille <ti...@debian.org>
Date: Wed Feb 21 14:30:49 2018 +0100
Commit status of debian/0.8
diff --git a/VERSION b/VERSION
index eb49d7c..aec258d 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-0.7
+0.8
diff --git a/common/conf b/common/conf
index a665e5a..f7dd169 100644
--- a/common/conf
+++ b/common/conf
@@ -1,4 +1,9 @@
## This is a configuration file for Debian-med Custom Debian Distribution
## It is read after /etc/cdd/cdd.conf and can override or add variables
-UPDATEUSERMENU=yes
+## This variable is replaced by a debconf question
+## UPDATEUSERMENU=yes
+
+## Some CDDs do not build their name generic like Debian-#CDD# so
+## we need the correct name here
+CDDNAME=Debian-Med
diff --git a/debian/changelog b/debian/changelog
index 757e07d..91a0c53 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+debian-med (0.8) unstable; urgency=low
+
+ * Added med-physics, med-pharmacy, med-bio-dev
+ * Overworked menus of meta packages
+
+ -- Andreas Tille <ti...@debian.org> Fri, 4 Jun 2004 14:44:36 +0200
+
debian-med (0.7) unstable; urgency=low
* Switched to new version of cdd package (0.3) which has many
diff --git a/debian/control b/debian/control
index f8d3d96..cabc02c 100644
--- a/debian/control
+++ b/debian/control
@@ -2,7 +2,7 @@ Source: debian-med
Section: misc
Priority: extra
Maintainer: Andreas Tille <ti...@debian.org>
-Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3)
+Build-Depends-Indep: debhelper (>= 4), cdd-dev (>= 0.3.2)
Standards-Version: 3.6.1
Package: med-common
@@ -18,22 +18,30 @@ Description: Debian-Med Project common package
Package: med-bio
Architecture: all
-Depends: bioperl, blast2, boxshade, bugsx, fastdnaml, fastlink, garlic,
ghemical, hmmer, loki, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, njplot,
pymol, r-cran-qtl, rasmol, readseq, tigr-glimmer, tree-puzzle, med-common (>=
0.8.3)
-Suggests: biomode, clustalw, clustalw-mpi, clustalx, molphy, phylip,
r-base-core, seaview, treetool
+Depends: blast2, boxshade, bugsx, fastdnaml, fastlink, garlic, ghemical,
hmmer, loki, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, njplot, pymol,
r-cran-qtl, rasmol, readseq, tigr-glimmer, tree-puzzle, med-common (>=
${binary:Version})
+Suggests: clustalw, clustalw-mpi, clustalx, molphy, phylip, seaview, treetool
Description: Debian-Med micro-biology packages
This meta package will install micro-biology related Debian packages
for use in medical research.
+Package: med-bio-dev
+Architecture: all
+Depends: bioperl, libncbi6-dev, libvibrant6-dev, mcl, med-common (>=
${binary:Version})
+Suggests: biomode, r-base-core
+Description: Debian-Med packages for development of micro-biology applications
+ This meta package will install Debian packages which might be helpful
+ for development of applications for micro-biological research.
+
Package: med-cms
Architecture: all
-Depends: zope-zms, med-common (>= 0.8.3)
+Depends: zope-zms, med-common (>= ${binary:Version})
Description: Debian-Med content management systems
This meta package will install packages which are useful to build a
content management system for medical care.
Package: med-dent
Architecture: all
-Depends: mozilla-browser, med-common (>= 0.8.3)
+Depends: mozilla-browser, med-common (>= ${binary:Version})
Suggests: debconf (>= 1.2), debianutils (>= 2.6.2), www-browser
Description: Debian-Med package for dental practice client
This meta package will configure your system to act as client for the
@@ -41,7 +49,7 @@ Description: Debian-Med package for dental practice client
Package: med-imaging
Architecture: all
-Depends: ctn, ctsim, medcon, minc-tools, paul, xmedcon, med-common (>= 0.8.3)
+Depends: ctn, ctsim, medcon, minc-tools, paul, xmedcon, med-common (>=
${binary:Version})
Suggests: imagemagick
Description: Debian-Med imaging packages
This meta package will install Debian packages which might be useful in
medical
@@ -49,14 +57,33 @@ Description: Debian-Med imaging packages
Package: med-imaging-dev
Architecture: all
-Depends: ctn-dev, libgtkimreg-dev, libmdc2-dev, libminc0-dev, med-common (>=
0.8.3)
+Depends: ctn-dev, libgtkimreg-dev, libmdc2-dev, libminc0-dev, med-common (>=
${binary:Version})
Description: Debian-Med packages for medical image development
This meta package will install Debian packages which might be useful
for developing applications for medical image processing.
+Package: med-pharmacy
+Architecture: all
+Depends: chemtool, med-common (>= ${binary:Version})
+Description: Debian-Med packages for pharmaceutical research
+ This meta package contains dependencies for a
+ collection of software and documentation which is useful for
+ pharmaceutical research.
+
+Package: med-physics
+Architecture: all
+Depends: octave, paw++, r-base,
[Blends-commit] [SCM] med tag, debian/0.8, created. b0a51476449d07638c4fd4f3beca147e9902a985
The tag, debian/0.8 has been created at b0a51476449d07638c4fd4f3beca147e9902a985 (commit) - Shortlog commit b0a51476449d07638c4fd4f3beca147e9902a985 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:30:49 2018 +0100 Commit status of debian/0.8 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.8.3, created. 5adb6010fe4ff981059a50c4bcfd3f9a44b37711
The tag, debian/0.8.3 has been created at 5adb6010fe4ff981059a50c4bcfd3f9a44b37711 (commit) - Shortlog commit 5adb6010fe4ff981059a50c4bcfd3f9a44b37711 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:32:46 2018 +0100 Commit status of 0.8.3 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.8.2, created. d877e5abcc3eca83eb0c898adf6581cf556e8111
The tag, debian/0.8.2 has been created at d877e5abcc3eca83eb0c898adf6581cf556e8111 (commit) - Shortlog commit d877e5abcc3eca83eb0c898adf6581cf556e8111 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:32:07 2018 +0100 Status of release 0.8.2 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.8.9, created. 6c0b338c229d6163381015383ea1a8ab646c33e2
The tag, debian/0.8.9 has been created at 6c0b338c229d6163381015383ea1a8ab646c33e2 (commit) - Shortlog commit 6c0b338c229d6163381015383ea1a8ab646c33e2 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:36:11 2018 +0100 Commit status of 0.8.9 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, historic, updated. 6c0b338c229d6163381015383ea1a8ab646c33e2
The following commit has been merged in the historic branch:
commit a55a5ddad2f8a9e456d2aa208269fa4f7e7bdf2a
Author: Andreas Tille <ti...@debian.org>
Date: Wed Feb 21 14:31:33 2018 +0100
Commit status of 0.8.1
diff --git a/common/control b/common/control
index 717a050..e7ee8b3 100644
--- a/common/control
+++ b/common/control
@@ -1,6 +1,6 @@
Package: med-common
Architecture: all
-Depends: adduser, debconf (>= 1.2), menu, cdd-common (>= 0.3)
+Depends: adduser, debconf (>= 1.2), menu, cdd-common (>= 0.3.2)
Description: Debian-Med Project common package
This package builds the basic infra structure of all med-* packages.
.
diff --git a/debian/changelog b/debian/changelog
index 91a0c53..692ce32 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+debian-med (0.8.1) unstable; urgency=low
+
+ * Adjust versioned dependency of med-common from cdd-common
+Closes: #258373
+
+ -- Andreas Tille <ti...@debian.org> Fri, 9 Jul 2004 09:18:49 +0200
+
debian-med (0.8) unstable; urgency=low
* Added med-physics, med-pharmacy, med-bio-dev
diff --git a/debian/control b/debian/control
index cabc02c..8c9abfe 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,7 @@ Standards-Version: 3.6.1
Package: med-common
Architecture: all
-Depends: adduser, ${misc:Depends}, menu, cdd-common (>= 0.3)
+Depends: adduser, ${misc:Depends}, menu, cdd-common (>= 0.3.2)
Description: Debian-Med Project common package
This package builds the basic infra structure of all med-* packages.
.
--
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[Blends-commit] [SCM] med tag, debian/0.10, created. 97852936d60a4794671848e67d352fca8e7bc3f3
The tag, debian/0.10 has been created at 97852936d60a4794671848e67d352fca8e7bc3f3 (commit) - Shortlog commit 97852936d60a4794671848e67d352fca8e7bc3f3 Author: Andreas Tille <ti...@debian.org> Date: Tue Sep 27 05:47:53 2005 + New version including new meta package --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.10.1, created. 9d331d57e474de84caa79f0e3535d83b773c4a65
The tag, debian/0.10.1 has been created
at 9d331d57e474de84caa79f0e3535d83b773c4a65 (commit)
- Shortlog
commit 9d331d57e474de84caa79f0e3535d83b773c4a65
Author: Andreas Tille <ti...@debian.org>
Date: Wed Oct 5 06:07:26 2005 +
mde-common depends now ${misc:depends} to enable | debconf-2.0 alternate
---
--
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[Blends-commit] [SCM] med tag, debian/0.13, created. 938e2e0dadbea150d41dcd203c8cbef388d9c780
The tag, debian/0.13 has been created at 938e2e0dadbea150d41dcd203c8cbef388d9c780 (commit) - Shortlog commit 938e2e0dadbea150d41dcd203c8cbef388d9c780 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:20:28 2018 +0100 Real commit for version 0.13 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.12, created. 6be68537b4a0f766afae194cb49252396c4db85c
The tag, debian/0.12 has been created at 6be68537b4a0f766afae194cb49252396c4db85c (commit) - Shortlog commit 6be68537b4a0f766afae194cb49252396c4db85c Author: Andreas Tille <ti...@debian.org> Date: Sat Jun 2 21:16:48 2007 + Replaced textopo by texliv-science which now contains this package --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, releases_0.13, created. 938e2e0dadbea150d41dcd203c8cbef388d9c780
The branch, releases_0.13 has been created at 938e2e0dadbea150d41dcd203c8cbef388d9c780 (commit) - Shortlog commit 938e2e0dadbea150d41dcd203c8cbef388d9c780 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:20:28 2018 +0100 Real commit for version 0.13 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.15, created. dcd0cd5e0f337cfaf613767f3a29d0d1806e17ad
The tag, debian/0.15 has been created at dcd0cd5e0f337cfaf613767f3a29d0d1806e17ad (commit) - Shortlog commit dcd0cd5e0f337cfaf613767f3a29d0d1806e17ad Author: Andreas Tille <ti...@debian.org> Date: Wed Dec 5 20:37:57 2007 + Tagged 0.14 and 0.15 releases --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, releases_2.0, created. fada849a30896f42378331e2932ba94b1508fc1a
The branch, releases_2.0 has been created at fada849a30896f42378331e2932ba94b1508fc1a (commit) - Shortlog commit fada849a30896f42378331e2932ba94b1508fc1a Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 13:35:16 2018 +0100 Somehow release 2.0 was not properly commited to master - at least there is no according commit. Just record this in a separate release branch. --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.16, created. 49f1610ce4ddb1020b2c310dfb0fce14f27e5841
The tag, debian/0.16 has been created at 49f1610ce4ddb1020b2c310dfb0fce14f27e5841 (commit) - Shortlog commit 49f1610ce4ddb1020b2c310dfb0fce14f27e5841 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 20 15:51:03 2008 + Tagged 0.16 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.14, created. 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322
The tag, debian/0.14 has been created at 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322 (commit) - Shortlog commit 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:10:20 2018 +0100 Commit real release 0.14 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, releases_0.14, created. 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322
The branch, releases_0.14 has been created at 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322 (commit) - Shortlog commit 6f1d5c7e7a47c4c2b2624eb92c9e432aebd90322 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 14:10:20 2018 +0100 Commit real release 0.14 --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/2.0, created. fada849a30896f42378331e2932ba94b1508fc1a
The tag, debian/2.0 has been created at fada849a30896f42378331e2932ba94b1508fc1a (commit) - Shortlog commit fada849a30896f42378331e2932ba94b1508fc1a Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 13:35:16 2018 +0100 Somehow release 2.0 was not properly commited to master - at least there is no according commit. Just record this in a separate release branch. --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/1.3, created. c58aa9bb56916c122d353cceffad228d4365d7bd
The tag, debian/1.3 has been created at c58aa9bb56916c122d353cceffad228d4365d7bd (commit) - Shortlog commit c58aa9bb56916c122d353cceffad228d4365d7bd Author: Andreas Tille <ti...@debian.org> Date: Sat Aug 22 19:25:45 2009 + Revert s/Depends/Recommends/, Reason: Current blends-dev does not handle Recommends properly. Go with this situation for the moment until blends-dev gets rewritten --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med tag, debian/0.17, created. 5972af3b70c2bc8752813ab2acbfc463ef6220a3
The tag, debian/0.17 has been created at 5972af3b70c2bc8752813ab2acbfc463ef6220a3 (commit) - Shortlog commit 5972af3b70c2bc8752813ab2acbfc463ef6220a3 Author: Andreas Tille <ti...@debian.org> Date: Wed Mar 12 15:49:29 2008 + Polishing suggestions from Steffen Möller, more up to date info about bioconductor --- -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] science branch, master, updated. 516825147fe2190cc5209d71c7715864c0f96677
The following commit has been merged in the master branch: commit 516825147fe2190cc5209d71c7715864c0f96677 Author: Andreas Tille <ti...@debian.org> Date: Wed Feb 21 08:52:22 2018 +0100 Add dxf2gcode diff --git a/tasks/electronics b/tasks/electronics index d8fdc36..2679c0f 100644 --- a/tasks/electronics +++ b/tasks/electronics @@ -76,6 +76,8 @@ Depends: fpga-icestorm, arachne-pnr Depends: dfcgen-gtk +Depends: dxf2gcode + Depends: vbpp Pkg-URL: http://snapshot.debian.org/package/vbpp/ Homepage: http://www.flex.com/~jching/ -- Debian Science Blend ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, master, updated. 99d32fb224029cc14d4641447ab6b9d8d91b193c
The following commit has been merged in the master branch: commit 99d32fb224029cc14d4641447ab6b9d8d91b193c Author: Andreas Tille <ti...@debian.org> Date: Sun Feb 18 00:13:52 2018 +0100 Remove not-really-comments that are breaking tasks pages diff --git a/tasks/imaging b/tasks/imaging index 9f9fd16..2e17463 100644 --- a/tasks/imaging +++ b/tasks/imaging @@ -89,14 +89,6 @@ Recommends: ginkgocadx Recommends: openslide-tools -#Recommends: volview -#Pkg-URL: http://snapshot.debian.org/package/volview/3.4%2Bdfsg-1/ -#WNPP: 745023 -#Comment: removed from Debian and only available in Wheezy or snapshot.debian.org -# The package was removed from Debian since VolView is a legacy software that -# is currently abandoned upstream. Apparently VolViewNinja would be the -# successor (see bug #745023). - Recommends: conquest-common Suggests: conquest-dbase, conquest-mysql, conquest-postgres, conquest-sqlite -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] science branch, master, updated. 2f54a4aec5462ca726fdda72374f719b14f41548
The following commit has been merged in the master branch: commit 2f54a4aec5462ca726fdda72374f719b14f41548 Author: Andreas Tille <ti...@debian.org> Date: Sat Feb 17 17:57:23 2018 +0100 Add aseba to robotics task diff --git a/tasks/robotics b/tasks/robotics index c01eb4c..7b4d5fe 100644 --- a/tasks/robotics +++ b/tasks/robotics @@ -205,3 +205,5 @@ Suggests: octave, gnuplot Depends: octomap-tools, octovis + +Recommends: aseba -- Debian Science Blend ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 3bc4a99576b335a37fb28359e140918e2399a784
The following commit has been merged in the master branch:
commit 3bc4a99576b335a37fb28359e140918e2399a784
Author: Andreas Tille <ti...@debian.org>
Date: Mon Feb 12 17:12:06 2018 +0100
Alternatively the perl gitlab api looks convenient
diff --git a/misc/machine_readable/fetch-machine-readable_salsa
b/misc/machine_readable/fetch-machine-readable_salsa
index 4f244d3..34ef3cb 100755
--- a/misc/machine_readable/fetch-machine-readable_salsa
+++ b/misc/machine_readable/fetch-machine-readable_salsa
@@ -29,6 +29,9 @@ get_one_page () {
curl --silent -D $HEADERS_FILE
"$SALSA_URL/groups/$SALSA_GROUP_ID/projects?private_token=$SALSA_TOKEN=true_page=$PER_PAGE=$PAGENO"
| jq --raw-output ".[] | .path"
}
+# Alternatively use
+# gitlab-api-v4 --all group_projects science-team | jq -r '.[].name'
+
list_salsa_projects () {
SALSA_GROUP="$1"
PER_PAGE=100
--
Static and dynamic websites for Debian Pure Blends
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[Blends-commit] [SCM] med branch, master, updated. 71ed9e5e84c6d36c5b712a30d3e559f0d97fe61d
The following commit has been merged in the master branch: commit 71ed9e5e84c6d36c5b712a30d3e559f0d97fe61d Author: Andreas Tille <ti...@debian.org> Date: Mon Feb 12 10:57:31 2018 +0100 Add assemblytics diff --git a/tasks/bio b/tasks/bio index 77d2921..fb19237 100644 --- a/tasks/bio +++ b/tasks/bio @@ -385,6 +385,8 @@ Recommends: arden Recommends: artfastqgenerator, art-nextgen-simulation-tools +Recommends: assemblytics + Recommends: augustus Recommends: baitfisher -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, master, updated. 2b1663c808bf6b8a7ae42dfe36a07155d1193e71
The following commit has been merged in the master branch: commit 2b1663c808bf6b8a7ae42dfe36a07155d1193e71 Author: Andreas Tille <ti...@debian.org> Date: Sun Feb 11 19:28:36 2018 +0100 Add toil diff --git a/tasks/bio b/tasks/bio index ef41f97..77d2921 100644 --- a/tasks/bio +++ b/tasks/bio @@ -1028,6 +1028,8 @@ Recommends: tnseq-transit Recommends: tn-seqexplorer +Recommends: toil + Recommends: transrate-tools Recommends: treeview -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, master, updated. 0ac82f3910b140b58d425750eea6e66ffaafccd2
The following commit has been merged in the master branch: commit 0ac82f3910b140b58d425750eea6e66ffaafccd2 Author: Andreas Tille <ti...@debian.org> Date: Sun Feb 11 19:27:31 2018 +0100 Add bcbio diff --git a/tasks/bio b/tasks/bio index bb07ff6..ef41f97 100644 --- a/tasks/bio +++ b/tasks/bio @@ -443,6 +443,8 @@ Recommends: bamtools Recommends: bagpipe +Recommends: bcbio + Recommends: bcftools Recommends: bigsdb -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] med branch, master, updated. c7a7959f5cde1f05505951363d6adf0bbd12a4b2
The following commit has been merged in the master branch: commit c7a7959f5cde1f05505951363d6adf0bbd12a4b2 Author: Andreas Tille <ti...@debian.org> Date: Sun Feb 11 18:17:48 2018 +0100 porechop diff --git a/tasks/bio b/tasks/bio index 4e942b7..bb07ff6 100644 --- a/tasks/bio +++ b/tasks/bio @@ -730,6 +730,8 @@ Recommends: oases Recommends: obitools +Recommends: porechop + Recommends: r-other-apmswapp Recommends: pal2nal -- Debian Med metapackages ___ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit
[Blends-commit] [SCM] website branch, master, updated. 17c762e952d7fa4c4e1499afdb9250e5530ccf47
The following commit has been merged in the master branch:
commit 17c762e952d7fa4c4e1499afdb9250e5530ccf47
Author: Andreas Tille <ti...@debian.org>
Date: Sun Feb 11 17:53:51 2018 +0100
Start working on fetching machine readable data from salsa
diff --git a/misc/machine_readable/fetch-machine-readable_salsa
b/misc/machine_readable/fetch-machine-readable_salsa
new file mode 100755
index 000..4f244d3
--- /dev/null
+++ b/misc/machine_readable/fetch-machine-readable_salsa
@@ -0,0 +1,92 @@
+#!/bin/sh
+# This script should be called on Alioth to gather all machine readable files
+# of VCSes mentioned in SVNDIRS and GITDIRS
+#
+# TODO: store file .vcs with the Vcs URL where the files were found
+
+. ./salsarc
+
+TDNAME=machine-readable
+MACHINEREADABLEARCHIVE=/srv/blends.debian.org/www/_${TDNAME}/${TDNAME}.tar.bz2
+READMEDEBIANARCHIVE=/srv/blends.debian.org/www/_${TDNAME}/README.Debian.tar.bz2
+TARGETDIR=${HOME}/$TDNAME
+mkdir -p $TARGETDIR
+
+ERRLOG=${HOME}/${TDNAME}.log
+rm -f $ERRLOG
+
+GITTEAMS="debichem-team
+ med-team
+ r-pkg-team
+ science-team"
+
+ANONSCM_DICT="debichem-team:debichem/packages\n
+ med-team:debian-med\n
+ r-pkg-team:debian-science/packages\n
+ science-team:debian-science/packages"
+
+get_one_page () {
+curl --silent -D $HEADERS_FILE
"$SALSA_URL/groups/$SALSA_GROUP_ID/projects?private_token=$SALSA_TOKEN=true_page=$PER_PAGE=$PAGENO"
| jq --raw-output ".[] | .path"
+}
+
+list_salsa_projects () {
+ SALSA_GROUP="$1"
+ PER_PAGE=100
+ HEADERS_FILE=$(mktemp)
+ trap "rm -f $HEADERS_FILE" EXIT
+
+ SALSA_GROUP_ID=$(curl --silent -f -XGET --header "PRIVATE-TOKEN:
$SALSA_TOKEN" "$SALSA_URL/groups?all_available=false" | jq ".[] | select(.path
== \"$SALSA_GROUP\") | .id")
+
+ PAGENO=1
+
+ get_one_page
+
+ TOTAL_PAGES=$(grep ^X-Total-Pages: $HEADERS_FILE)
+ TOTAL_PAGES=${TOTAL_PAGES#*: }
+
+ while [ $PAGENO -lt $TOTAL_PAGES ]
+ do
+PAGENO=$((PAGENO+1))
+get_one_page
+ done
+}
+
+mkdir -p $TARGETDIR
+rm -rf $TARGETDIR/*
+
+for team in $GITTEAMS ; do
+ echo $team >> $ERRLOG
+ for gitrepo in `list_salsa_projects $team` ; do
+firstletter=`echo $gitrepo | sed "s/^\(.\).*/\1/"`
+mkdir -p $TARGETDIR/$firstletter
+echo "Vcs-Git: g...@salsa.debian.org:$team/$gitrepo.git" >
$TARGETDIR/$firstletter/${gitrepo}.vcs
+# Hint: Debian Med and Debichem R packages do not match this but who cares
;-)
+# Also some packages that never were on Alioth Git do not have a
valid Vcs-Browser via that method
+anonscmdir=`echo $ANONSCM_DICT | grep $team | head -n 1 | sed "s/^
*${team}://"`
+echo "Vcs-Browser:
https://anonscm.debian.org/cgit/$anonscmdir/$gitrepo.git; >>
$TARGETDIR/$firstletter/${gitrepo}.vcs
+wget -q
https://salsa.debian.org/$team/$gitrepo/raw/master/debian/changelog -O
$TARGETDIR/$firstletter/${gitrepo}.changelog
+wget -q https://salsa.debian.org/$team/$gitrepo/raw/master/debian/control
-O $TARGETDIR/$firstletter/${gitrepo}.control
+wget -q
https://salsa.debian.org/$team/$gitrepo/raw/master/debian/copyright -O
$TARGETDIR/$firstletter/${gitrepo}.copyright
+wget -q
https://salsa.debian.org/$team/$gitrepo/raw/master/debian/upstream/metadata -O
$TARGETDIR/$firstletter/${gitrepo}.upstream
+wget -q
https://salsa.debian.org/$team/$gitrepo/raw/master/debian/upstream/edam -O
$TARGETDIR/$firstletter/${gitrepo}.edam
+ done
+done
+
+FOUNDDIRS=`ls $TDNAME | wc -l`
+if [ $FOUNDDIRS -lt 10 ] ; then
+ echo "Found way to less packages in $TDNAME" >> $ERRLOG
+ exit
+fi
+rm -f $MACHINEREADABLEARCHIVE
+cd $TARGETDIR
+cd ..
+find $TDNAME -maxdepth 1 -mindepth 1 -name ".*" -delete
+# Remove empty files
+find $TDNAME -type f -empty -delete
+tar --exclude=*README.Debian -cjf $MACHINEREADABLEARCHIVE $TDNAME
+tar --exclude=*.control --exclude=*.changelog --exclude=*.upstream
--exclude=*.edam --exclude=*.vcs --exclude=*.copyright -cjf
$READMEDEBIANARCHIVE $TDNAME
+
+# Check for remaining tempfiles
+if ls -l /tmp/tmp.* 2>/dev/null | grep `whoami` > /dev/null ; then
+echo "There are tempfiles remaining!\n" | mailx -s "$0 has left some
remaining files in /tmp" ti...@debian.org
+fi
--
Static and dynamic websites for Debian Pure Blends
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[Blends-commit] [SCM] website branch, master, updated. 083b3628d73f6aa143746b8c7dc5203ed9ab23c8
The following commit has been merged in the master branch:
commit 083b3628d73f6aa143746b8c7dc5203ed9ab23c8
Author: Andreas Tille <ti...@debian.org>
Date: Sun Feb 11 17:27:24 2018 +0100
No restriction about the actual task - just give all
diff --git a/misc/sql/edam.sh b/misc/sql/edam.sh
index faf6d4c..4e7066f 100755
--- a/misc/sql/edam.sh
+++ b/misc/sql/edam.sh
@@ -100,7 +100,7 @@ $JSONBEGIN
source, homepage, description, description_md5
FROM blends_prospectivepackages
WHERE package IN
- (SELECT DISTINCT package FROM blends_dependencies WHERE
blend = 'debian-med' AND task IN ('bio', 'bio-dev'))
+ (SELECT DISTINCT package FROM blends_dependencies WHERE
blend = 'debian-med') -- AND task IN ('bio', 'bio-dev', 'imaging',
'imaging-dev'))
) tmp
) p
LEFT OUTER JOIN (
--
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