[ccp4bb] on R-free label

[Smith Liu]

Dear All,


Will you please tell me how to know whether my mtz file has the R-free label or 
not?


SMith

Re: [ccp4bb] on R-free label

[Robbie Joosten]

Just run mtzdmp on your file and look at the data columns. The column label 
should be very obvious.

Cheers,
Robbie

Sent with my Windows Phone

Van: Smith Liu
Verzonden: ‎5-‎7-‎2015 10:01
Aan: CCP4BB@JISCMAIL.AC.UK
Onderwerp: [ccp4bb] on R-free label

Dear All,


Will you please tell me how to know whether my mtz file has the R-free label or 
not?


SMith

[ccp4bb] topdraw

[Faisal Tarique]

Dear all

Can anybody provide me the link to download or install " TopDraw " a
topology drawing interface in CCP4..?

Thanks

-- 
Regards

Faisal
School of Life Sciences
JNU

Re: [ccp4bb] topdraw

[Edward A. Berry]

I think it is part of ccp4:
$CCP4/bin/topdraw

On 07/05/2015 10:30 AM, Faisal Tarique wrote:

Dear all

Can anybody provide me the link to download or install " TopDraw " a topology 
drawing interface in CCP4..?

Thanks

--
Regards

Faisal
School of Life Sciences
JNU

[ccp4bb] phenix.refine error

[yamei yu]

 Hi all,

Recently I refine a structure with a small molecular covalently linked with it. 
I apply the cif file of the small molecule to the software (phenix.refine) and 
in the input file I add the link like this:
apply_cif_link {
  data_link = "TAJ-ASP"
  residue_selection_1 = "chain G and resname TAJ and resid 1"
  residue_selection_2 = "chain B and resname ASP and resid 224”

However, there was an error:

apply_cif_link:
data_link: TAJ-ASP

Sorry: Missing CIF link: data_link_TAJ-ASP
  Please check for spelling errors or specify the file name
  with the link as an additional argument.

How could I solve this problem? Thank you so much!

All the best!




Yamei Yu
 
State Key Laboratory of Biotherapy／Collaborative Innovation 
Center of Biotherapy, 
West China Hospital, 
Sichuan University,Chengdu,610041, P.R.China
Tel: 15882013485
Email: ymyux...@gmail.com
   ymyux...@163.com
   yamei...@scu.edu.cn