[ccp4bb] Postdoc and RA position at Zewail University, Cairo

2013-08-13 Thread fareed aboul-ela
*Postdoctoral and Research Assistant (2 positions) in Structural Biology 
at Zewail City for Science and Technology*


Zewail City is initiating a research program in Biophysics and 
Structural Biology focusing on protein and nucleic acid structure and 
nucleic acid-protein and nucleic acid-small molecule interactions. The 
Center invites applications for two positions.


We are seeking applicants with a B.Sc. or M.Sc. in a basic science and 
more than one year's laboratory experience for a Research Assistantship 
position. The candidate should have a strong background in Physics 
and/or Chemistry or a related field. Lab experience in Biochemistry or 
Molecular Biology is a plus.The candidate will participate in research 
projects involving interactions between nucleic acids and small 
molecules and/or proteins.


The second position is for a Postdoctoral Research Associate in the area 
of Structural Biology and ligand-protein and ligand-RNA interactions. 
Candidates should have a Ph. D. in Biochemistry or a related field, with 
a proven track record at all stages of protein or nucleic acid structure 
determination by X-ray Crystallography, from sample preparation to 
crystallization, to structure refinement. Experience with Biophysical 
methods, such as Surface Plasmon Resonance (SPR), is preferred. An 
interest in Drug Discovery is a plus.


To ensure full consideration, please send your application letter, 
curriculum vitae and a brief statement of a research career plan (not 
more than 1 page for RA position, or 3 pages for Postdoc) to Dr. Fareed 
Aboul-ela by email at: faboul...@zewailcity.edu.eg 
<mailto:yism...@zewailcity.edu.eg>.Evaluations of applications will 
begin *by September 15, 2013, **and continue until each position is 
filled*. Please use the job code 'XRD-PostDoc-Aug13' (for the Postdoc 
position) or 'XRD-RA-Aug13' (for the RA position) in the subject line of 
your e-mail.


For more information about Zewail City please visit our website and jobs 
page:


http://www.zewailcity.edu.eg/
http://www.zewailcity.edu.eg/the-city/jobs/

--
Fareed Aboul-ela
Associate Professor
Zewail University
Tel: +20 2 385 40 403
Fax: +20 2 385 17 181
Sheikh Zayed District, 12588
6th of October City, Giza, Egypt
Website: www.zewailcity.edu.eg



[ccp4bb] detectors on home sources

2013-05-06 Thread Fareed Aboul-Ela
Thanks to all who generously shared your experiences with Pilatus and CMOS
detectors with me, both on and offline.  I’ve compiled the online responses
here, but given that the vast majority of the responses were offline I’ll
attempt to briefly summarize what I learned.



First no one has had either of these detectors at their home source for a
very long time (> ~1 year).  But, the good news is that there are no
complaints so far. In fact, I only received positive reports from users of
both detectors, especially the Pilatus.  One caution, though, none of the
Pilatus users have yet used the version (200K) which Rigaku are now
offering as standard on their instruments.



There is skepticism about whether advantages in sensitivity and dynamic
range for the Pilatus will be noticeable in a home source. Rather, the beam
intensity may be the limiting factor even for some of the microfocus
rotating anode sources. Another point was raised about the large pixel
size. There is a gap in the detector and one user suggested that a triple
axis goniometer may be necessary to generate the redundancy to compensate.



Agilent have a poster which I’m sure they will be happy to share showing
sensitivity on their ATLAS CCD superior to that of a CMOS detector.
Nonetheless, those with experience using either Photon-100 or Pilatus 200k
detectors at home were very happy with the shutter-less data collection.
Another advantage is that the currently offered versions of these detectors
do not require cooling water. So, with respect to maintenance both seem to
be easier that CCD detectors.



So, overall it’s early days and there is skepticism, but, so far the actual
users seem to have no complaints.



We still haven’t found anyone who has used the Bruker TXS microfocus
rotating anode at home. I think we’re going to have to find forums for
small molecule crystallographers.



Many thanks again.



Fareed



Date:Thu, 2 May 2013 16:04:56 +0200
From:Dworkowski Florian 
Subject: Re: detectors on home sources

I can not really speak for a home-source setup, but here at the SLS MX
group we run two Pilatus6M (one of which is the first Pilatus ever made)
and one Pilatus2M. In nearly four years since we installed the first one
we never had any hardware issue other than users damaging the case. So
I'd say the reliability of the DECTRIS detectors is excellent.

Cheers,
Florian

-
Paul Scherrer Institut
Dr. Florian Dworkowski
Beamline Scientist X10SA

Swiss Light Source
WSLA/219
5232 Villigen PSI
Switzerland

Phone +41 56 310 3584
Fax +41 56 310 5292
florian.dworkow...@psi.ch
http://www.psi.ch/macromolecular-crystallography
http://www.psi.ch/macromolecular-crystallography>



 On Tue, Apr 30, 2013 at 11:44 PM,  wrote:

>  I second this opinion. At the end of next week our Pilatus 200K will be
> delivered. Soon after that I will be able to report on its characterist
> ics.
>
> But really, Boaz nailed it: reliability and service are very important.
> It does not matter how good something is on paper if you cannot keep it
> running. And with this e-mail I think it is clear what my recommendation
> was to our department and I am pleased that the recommendation was
> followed. Exactly as Boaz suggests, it was based in significant part on
consideration
> of reliability and quality of service. It is to be noted that reliability
> of instruments and quality of service could vary from region to region,
> that is, good service in the US may and may not translate to good service
> elsewhere. It would be good to do a "regional poll" for this.
>
> Having said all this, it is my impression that the newer technology has
> fewer moving parts and therefore should be expected to be more reliable.
> But I don't know that for sure, please ask again in 3-5 years. :-)
>
> Mark
>
>
>  -Original Message-
> From: Boaz Shaanan 
> To: CCP4BB 
> Sent: Tue, Apr 30, 2013 2:53 pm
> Subject: Re: [ccp4bb] detectors on home sources
>
>  One of the main things (if not THE main thing) to worry about when
> investing in such expensive equipment is long-time reliability and quality
> of service in your place. Nothing is more frustrating than seeing your
> wonderful and expensive equipment standing idle for long periods because
of
> lack of service. This may mean quite often taking compromises and going
> perhaps not for the front-line state-of-art piece of equipment but rather
> for the sturdy, hard-working equipment. It worked for us very well.
>
>  My 2p advice.
>
>Boaz
>
>
>
> *Boaz Shaanan, Ph.D.
> Dept. of Life Sciences
> Ben-Gurion University of the Negev
> Beer-Sheva 84105
> Israel
>
> E-mail: bshaa...@bgu.ac.il
> Phone: 972-8-647-2220  Skype: boaz.shaanan
> Fax:   972-8-647-2992 or 972-8-646-1710*
&g

Re: [ccp4bb] detectors on home sources

2013-04-30 Thread Fareed Aboul-Ela
Thanks so much for the generous replies I received so far both on and
offline.  By the way we visited the three top vendors and saw the systems
in operation. We were slightly handicapped since at startup we don't yet
have crystals and had to rely on standards, but the applications scientists
were all very helpful.

We are considering sealed tube sources, CCDs, etc., and we have an ample
set of contacts with experience on these systems to advise us. But I should
say that the purpose of my message was not to compare systems.  This would
be sensitive to do online anyway. The issue is the reliability in a home
lab as has been well stated below, specifically for the newer components.
Nothing like a satisfied customer to reassure on that point (or to warn
about potential problems), and that's what I'm looking for with
regard to the new detectors especially.

Many thanks again.

Fareed



On Tue, Apr 30, 2013 at 11:44 PM,  wrote:

>  I second this opinion. At the end of next week our Pilatus 200K will be
> delivered. Soon after that I will be able to report on its characterist
> ics.
>
> But really, Boaz nailed it: reliability and service are very important.
> It does not matter how good something is on paper if you cannot keep it
> running. And with this e-mail I think it is clear what my recommendation
> was to our department and I am pleased that the recommendation was
> followed. Exactly as Boaz suggests, it was based in significant part on 
> consideration
> of reliability and quality of service. It is to be noted that reliability
> of instruments and quality of service could vary from region to region,
> that is, good service in the US may and may not translate to good service
> elsewhere. It would be good to do a "regional poll" for this.
>
> Having said all this, it is my impression that the newer technology has
> fewer moving parts and therefore should be expected to be more reliable.
> But I don't know that for sure, please ask again in 3-5 years. :-)
>
> Mark
>
>
>  -Original Message-
> From: Boaz Shaanan 
> To: CCP4BB 
> Sent: Tue, Apr 30, 2013 2:53 pm
> Subject: Re: [ccp4bb] detectors on home sources
>
>  One of the main things (if not THE main thing) to worry about when
> investing in such expensive equipment is long-time reliability and quality
> of service in your place. Nothing is more frustrating than seeing your
> wonderful and expensive equipment standing idle for long periods because of
> lack of service. This may mean quite often taking compromises and going
> perhaps not for the front-line state-of-art piece of equipment but rather
> for the sturdy, hard-working equipment. It worked for us very well.
>
>  My 2p advice.
>
>Boaz
>
>
>
> *Boaz Shaanan, Ph.D.
> Dept. of Life Sciences
> Ben-Gurion University of the Negev
> Beer-Sheva 84105
> Israel
>
> E-mail: bshaa...@bgu.ac.il
> Phone: 972-8-647-2220  Skype: boaz.shaanan
> Fax:   972-8-647-2992 or 972-8-646-1710*
> **
> **
> *
>
> *
>   --
> *From:* CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Fareed
> Aboul-Ela [faboul...@zewailcity.edu.eg]
> *Sent:* Tuesday, April 30, 2013 10:00 PM
> *To:* CCP4BB@JISCMAIL.AC.UK
> *Subject:* [ccp4bb] detectors on home sources
>
>   I'm involved in advising my institute on an X-ray home source for a
> core facility.  The vendors are offering some new configurations. Whatever
> the claimed advantages/disadvantages, I'm hesitant to make a decision
> without consulting someone with direct experience with them.  In
> particular, has anyone had any experience with using the "photon100" CMOS
> detector being offered by Bruker, or the "pilatus 200K" detector being
> offered by Rigaku?  I'd also appreciate hearing from anyone with experience
> with the latest Bruker microfocus rotating anode generator (called the
> Turbo or TXS)?
>
> Many thanks for sharing your experiences.
>
> Fareed Aboul-ela
> Associate Professor
> Zewail University
> Zewail City of Science and Technology
> Giza, Egypt
> faboul...@zewailcity.edu.eg
>


[ccp4bb] detectors on home sources

2013-04-30 Thread Fareed Aboul-Ela
I'm involved in advising my institute on an X-ray home source for a core
facility.  The vendors are offering some new configurations. Whatever the
claimed advantages/disadvantages, I'm hesitant to make a decision without
consulting someone with direct experience with them.  In particular, has
anyone had any experience with using the "photon100" CMOS detector being
offered by Bruker, or the "pilatus 200K" detector being offered by Rigaku?
I'd also appreciate hearing from anyone with experience with the latest
Bruker microfocus rotating anode generator (called the Turbo or TXS)?

Many thanks for sharing your experiences.

Fareed Aboul-ela
Associate Professor
Zewail University
Zewail City of Science and Technology
Giza, Egypt
faboul...@zewailcity.edu.eg