[ccp4bb] Two postdoctoral positions at the Walter and Eliza Hall Institute, Melbourne

2019-07-10 Thread James Murphy
Dear colleagues,
We are seeking two talented and enthusiastic postdocs to join teams within the 
Inflammation Division of the Walter and Eliza Hall Institute of Medical 
Research, Melbourne, Australia: one focused on structural biology+cell biology; 
and another postdoc to study protein-protein interactions.

1. A postdoc or senior postdoc to study the structural and cell biology of 
pseudokinases, with a focus on the necroptosis effector MLKL
https://www.wehi.edu.au/research-officer-senior-research-officer-postdoctoral-scientist
Enquiries to jam...@wehi.edu.au<mailto:jam...@wehi.edu.au>

2. A postdoc to study the interactions of signaling proteins using biophysics 
and proteomics.
https://www.wehi.edu.au/research-officer-postdoctoral-scientist
Enquiries to snichol...@wehi.edu.au<mailto:snichol...@wehi.edu.au>

With thanks and best wishes
James

--
Assoc. Prof. James M. Murphy, PhD
Head, Inflammation Division
Walter and Eliza Hall Institute of Medical Research
1G Royal Parade
Parkville, VIC 3052, Australia

T: +61 3 93452407
F: +61 3 93470852

http://www.wehi.edu.au/people/james-murphy


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The Walter and Eliza Hall Institute acknowledges the Wurundjeri people of the 
Kulin
Nation as the traditional owners of the land where our campuses are located and
the continuing connection to country and community.
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[ccp4bb] Postdoctoral position in crystallography - Melbourne, Australia

2015-02-25 Thread James Murphy
Dear all,

An opportunity exists for a highly skilled and experienced Postdoctoral 
Scientist to join my lab in the Cell Signalling  Cell Death Division of the 
Walter and Eliza Hall Institute of Medical Research in Melbourne, Australia.

The laboratory is focused on the cellular signalling functions of a group of 
proteins related to protein kinases, called pseudokinases, which are believed 
to lack catalytic activity. The position is particularly interested in 
understanding their functions as molecular switches and how toggling these 
switches, whether by endogenous protein interactors or by small molecule 
modulators, regulates signalling pathways. We have a particular interest in the 
mechanism underlying activation of the pseudokinase, MLKL, which is a key 
mediator of cell death in the recently described necroptosis pathway (Murphy et 
al., Immunity 2013 39:443; Murphy et al., Biochem J 2014 457:369; Hildebrand et 
al., PNAS 2014 111:15072).

Applicants should possess a doctorate (PhD), with experience in protein 
crystallography including crystallisation, data collection and structure 
determination. Additional experience with cell culture techniques, including 
flow cytometry, immunoprecipitation, immunoblot and/or insect cell expression 
is also preferred.

This position is available for 2 years in the first instance. Salary is 
dependent on qualifications and experience. Up to 17% superannuation and 
attractive salary packaging options are available. Applications close on March 
20, 2015. Please see http://www.wehi.edu.au/research-officer-murphy-laboratory 
for further details on the position and application process.


Best wishes
James Murphy

-- 
James M. Murphy, PhD
Cell Signalling and Cell Death Division
Walter and Eliza Hall Institute of Medical Research
1G Royal Parade
Parkville, VIC 3052, Australia

http://www.wehi.edu.au/people/james-murphy

Save the date: December 5-8, 2015, San Diego, CA.
Kinases and pseudokinases: Spines, scaffolds and molecular switches
http://www.asbmb.org/ASBMBMeetings/SpecialSymposia/Kinases/

















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The information in this email is confidential and intended solely for the 
addressee.
You must not disclose, forward, print or use it without the permission of the 
sender.
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[ccp4bb] Ion identification in crystal structures

2010-05-20 Thread James Murphy
What is a good resource for identifying what seem to be ions (Na+, Cl-,
CO3-, NH4-) and not simply water molecules in a crystal structure?

 

 

 

 

James W. Murphy, Ph.D.

Associate Research Scientist; Dept. of Pharmacology

 

Facility Manager; Macromolecular Crystallography Facility

Yale University School of Medicine

 

333 Cedar Street, SHMB345

New Haven, CT 06510

 

Office: 203-737-1526

Cell: 203-906-5759

Fax: 203-737-2027

 

 

 



Re: [ccp4bb] SDS-PAGE of peptides

2010-02-11 Thread James Murphy
I have had very good results using 10% Tris-tricine gels, following the
protocol in Current Protocols for our chemokines (~8,000 mw)



James W. Murphy, Ph.D.
Associate Research Scientist; Dept. of Pharamcology
Facility Manager; Macromolecular Crystallography Facility
Yale University School of Medicine
 
333 Cedar Street, SHMB345
New Haven, CT 06510
 
Office: 203-737-1526
Cell: 203-906-5759
Fax: 203-737-2027
 
 

-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of Jacob
Keller
Sent: Thursday, February 11, 2010 2:13 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] SDS-PAGE of peptides

Dear Crystallographers,

does anybody have any good tricks for getting nice, sharp SDS-PAGE bands of 
peptides  10kD?

Regards,

Jacob Keller

***
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
Dallos Laboratory
F. Searle 1-240
2240 Campus Drive
Evanston IL 60208
lab: 847.491.2438
cel: 773.608.9185
email: j-kell...@northwestern.edu
***


Re: [ccp4bb] SAD phasing at home source

2009-10-26 Thread James Murphy
I have had success with Iodine, soak your crystal in your cryo + Potassium
Iodide

 

 

 

  _  

From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
james09 pruza
Sent: Monday, October 26, 2009 2:33 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] SAD phasing at home source

 

Dear All,

I need some suggestions regarding the SAD phasing using home source. What
the the most commonly used HA for SAD phasing for Cu anode.
All suggestions are welcome.
Thanks.

James



[ccp4bb] refmac and coot library file creation difficulty

2009-06-02 Thread James Murphy
I need to model in tetrachloroaurate molecules into a structure, from our
heavy atom soak of Potassium tetrachloroaurate.

 

I created a pdb file by using chemdraw and exporting as an *.sdf and opening
in pymol and saving as a *.pdb (attached)

 

I let refmac create a library file (also attached) that coot does not
recognize.

 

Also, coot does not draw bonds between the atoms.

 

Also, refmac, even with its own library file, moves the Cl atoms too close
and too far from the Au atom.

It should be a planar molecule.

 

Is there a better way to create a refmac *.cif file?

 

The dunded prodrg server cannot handle Au atoms.

 

I chose TCU as the monomer name as it does not occur in the refmac monomer
libararies.

 

Thanks

 

 

 

 

 



TCU.pdb
Description: Protein Databank data


TCU.cif
Description: Binary data