[ccp4bb] PDB crawler
Hi all, just wondering if anybody is aware of a service similar to PubCrawler (http://pubcrawler.gen.tcd.ie/), but for PDB structures, released and unreleased. Basically a weekly email that would alert you of freshly deposited structures that match some keywords. Thanks in advance, ciao Sebastiano -- Sebastiano Pasqualato, PhD Crystallography Unit Department of Experimental Oncology European Institute of Oncology IFOM-IEO Campus via Adamello, 16 20139 - Milano Italy tel +39 02 9437 5167 fax +39 02 9437 5990
Re: [ccp4bb] PDB crawler
Hi Sebastiano, Phyre Alarm would do something similar to what you suggest. http://www.sbg.bio.ic.ac.uk/phyre2/html/help.cgi?id=help/phyrealarm HTH, Dave David C. Briggs PhD http://about.me/david_briggs On 20 March 2013 12:40, Sebastiano Pasqualato sebastiano.pasqual...@gmail.com wrote: Hi all, just wondering if anybody is aware of a service similar to PubCrawler (http://pubcrawler.gen.tcd.ie/), but for PDB structures, released and unreleased. Basically a weekly email that would alert you of freshly deposited structures that match some keywords. Thanks in advance, ciao Sebastiano -- Sebastiano Pasqualato, PhD Crystallography Unit Department of Experimental Oncology European Institute of Oncology IFOM-IEO Campus via Adamello, 16 20139 - Milano Italy tel +39 02 9437 5167 fax +39 02 9437 5990
Re: [ccp4bb] PDB crawler
Hi, I think that what you're looking for (or close to it) is available on the pdb site. Through your PDB login you can do a search according to keyword(s) and ask to repeat the search periodically. You'll get an alert in the e-mail. I actually use it for some time. Cheers, Boaz Boaz Shaanan, Ph.D. Dept. of Life Sciences Ben-Gurion University of the Negev Beer-Sheva 84105 Israel E-mail: bshaa...@bgu.ac.il Phone: 972-8-647-2220Skype: boaz.shaanan Fax: 972-8-647-2992 or 972-8-646-1710 From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Sebastiano Pasqualato [sebastiano.pasqual...@gmail.com] Sent: Wednesday, March 20, 2013 2:40 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] PDB crawler Hi all, just wondering if anybody is aware of a service similar to PubCrawler (http://pubcrawler.gen.tcd.ie/), but for PDB structures, released and unreleased. Basically a weekly email that would alert you of freshly deposited structures that match some keywords. Thanks in advance, ciao Sebastiano -- Sebastiano Pasqualato, PhD Crystallography Unit Department of Experimental Oncology European Institute of Oncology IFOM-IEO Campus via Adamello, 16 20139 - Milano Italy tel 39 02 9437 5167 fax 39 02 9437 5990
Re: [ccp4bb] PDB crawler
Hi Sebastino Both PDB and PBDe have facebook pages. PDBe updates the page weekly with some snippets as well. On Wed, Mar 20, 2013 at 3:41 PM, Boaz Shaanan bshaa...@exchange.bgu.ac.ilwrote: Hi, I think that what you're looking for (or close to it) is available on the pdb site. Through your PDB login you can do a search according to keyword(s) and ask to repeat the search periodically. You'll get an alert in the e-mail. I actually use it for some time. Cheers, Boaz *Boaz Shaanan, Ph.D. Dept. of Life Sciences Ben-Gurion University of the Negev Beer-Sheva 84105 Israel E-mail: bshaa...@bgu.ac.il Phone: 972-8-647-2220 Skype: boaz.shaanan Fax: 972-8-647-2992 or 972-8-646-1710* ** ** * * -- *From:* CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Sebastiano Pasqualato [sebastiano.pasqual...@gmail.com] *Sent:* Wednesday, March 20, 2013 2:40 PM *To:* CCP4BB@JISCMAIL.AC.UK *Subject:* [ccp4bb] PDB crawler Hi all, just wondering if anybody is aware of a service similar to PubCrawler ( http://pubcrawler.gen.tcd.ie/), but for PDB structures, released and unreleased. Basically a weekly email that would alert you of freshly deposited structures that match some keywords. Thanks in advance, ciao Sebastiano -- Sebastiano Pasqualato, PhD Crystallography Unit Department of Experimental Oncology European Institute of Oncology IFOM-IEO Campus via Adamello, 16 20139 - Milano Italy tel +39 02 9437 5167 fax +39 02 9437 5990
