Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-06-04 Thread Darren Hart 

You have to start it via the menu item, not the command line.

Darren

On 03/06/2019 14:31, Pedro Matias wrote:


Well, I can't get it to work in FC30 - I installed FC30 on a virtual 
machine and managed to install both snapd and pymol-oss but pymol does 
not run as a command.


Am I missing something rather obvious?

Pedro

Às 12:46 de 03/06/2019, Matic Kisovec escreveu:

Hi,

thank you very much for this. Work fine on Ubuntu 19.04.

Kind regrds,
Matic


On 17. 05. 19 20:04, Arunabh Athreya wrote:

Thanks for sharing this.

Get Outlook for Android <https://aka.ms/ghei36>


*From:* CCP4 bulletin board  on behalf of 
David Schuller 

*Sent:* Thursday, May 16, 2019 11:41:19 PM
*To:* CCP4BB@JISCMAIL.AC.UK
*Subject:* Re: [ccp4bb] PyMOL now packaged as a snap on Linux
It seems to work on Fedora 30 and on Scientific Linux 7 (which means 
it should also work on RHEL7 and Centos 7)


Thank you.



On 5/16/19 10:47 AM, Darren Hart wrote:

Some more info:

https://snapcraft.io/pymol-oss

It seems to work exactly as expected.

Darren


On 16/05/2019 16:05, Folmer Fredslund wrote:

Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart <mailto:darren.h...@ibs.fr>>:


Since yesterday, PyMOL (open source version v2.3) has been
packaged as a
distro-independent "snap" that can be installed easily on linux
platforms - no more cloning from gitlab and compiling after
installing
the dependencies.

On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If
not, you
just need to install snapd in the regular way first (e.g. on
Debian:
sudo apt install snapd).

Hope this is useful for some folks.

Best regards,

Darren



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===
All Things Serve the Beam
===
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modern man in a post-modern world
MacCHESS, Cornell University
schul...@cornell.edu



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Industry and Medicine Applied Crystallography
Macromolecular Crystallography Unit
___
Phones : (351-21) 446-9100 Ext. 1669
  (351-21) 446-9669 (direct)
  Fax   : (351-21) 441-1277 or 443-3644

email :mat...@itqb.unl.pt

http://www.itqb.unl.pt/research/biological-chemistry/industry-and-medicine-applied-crystallography
http://www.itqb.unl.pt/labs/macromolecular-crystallography-unit

Mailing address :
Instituto de Tecnologia Quimica e Biologica António Xavier
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Av. da República
2780-157 Oeiras
PORTUGAL

ITQB NOVA, a great choice for your PhD
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**

Dr. Darren J. Hart,

CNRS Research Director, Institut de Biologie Structurale (IBS)
Unité Mixte de Recherche UMR5075 (CEA-CNRS-UGA)

Director, Integrated Structural Biology Grenoble (ISBG)
Unité Mixte de Service UMS3518 (CNRS-UGA-CEA-EMBL)

**

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Tel: +33 4 57 42 85 86

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Postal address: IBS/ISBG, 71 avenue des Martyrs, CS 20192, 38042

Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-06-03 Thread Pedro Matias 
Well, I can't get it to work in FC30 - I installed FC30 on a virtual
machine and managed to install both snapd and pymol-oss but pymol does
not run as a command.

Am I missing something rather obvious?

Pedro

Às 12:46 de 03/06/2019, Matic Kisovec escreveu:
> Hi,
>
> thank you very much for this. Work fine on Ubuntu 19.04.
>
> Kind regrds,
> Matic
>
>
> On 17. 05. 19 20:04, Arunabh Athreya wrote:
>> Thanks for sharing this.
>>
>> Get Outlook for Android <https://aka.ms/ghei36>
>>
>> 
>> *From:* CCP4 bulletin board  on behalf of
>> David Schuller 
>> *Sent:* Thursday, May 16, 2019 11:41:19 PM
>> *To:* CCP4BB@JISCMAIL.AC.UK
>> *Subject:* Re: [ccp4bb] PyMOL now packaged as a snap on Linux
>>  
>> It seems to work on Fedora 30 and on Scientific Linux 7 (which means
>> it should also work on RHEL7 and Centos 7)
>>
>> Thank you.
>>
>>
>>
>> On 5/16/19 10:47 AM, Darren Hart wrote:
>>> Some more info:
>>>
>>> https://snapcraft.io/pymol-oss
>>>
>>> It seems to work exactly as expected.
>>>
>>> Darren
>>>
>>>
>>> On 16/05/2019 16:05, Folmer Fredslund wrote:
>>>> Hi Darren,
>>>>
>>>> That's brilliant!
>>>>
>>>> I'll give it a spin and see how it works. 
>>>>
>>>> Best regards
>>>> Folmer 
>>>>
>>>>
>>>> tor. 16. maj 2019 13.02 skrev Darren Hart >>> <mailto:darren.h...@ibs.fr>>:
>>>>
>>>> Since yesterday, PyMOL (open source version v2.3) has been
>>>> packaged as a
>>>> distro-independent "snap" that can be installed easily on linux
>>>> platforms - no more cloning from gitlab and compiling after
>>>> installing
>>>> the dependencies.
>>>>
>>>> On Ubuntu, install from software centre or:
>>>>
>>>> sudo snap install pymol-oss
>>>>
>>>> Many distros have the snap architecture already installed. If
>>>> not, you
>>>> just need to install snapd in the regular way first (e.g. on
>>>> Debian:
>>>> sudo apt install snapd).
>>>>
>>>> Hope this is useful for some folks.
>>>>
>>>> Best regards,
>>>>
>>>> Darren
>>>>
>>>> 
>>>> 
>>>>
>>>> To unsubscribe from the CCP4BB list, click the following link:
>>>> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>>>>
>>>
>>> -- 
>>>
>>>
>>> 
>>>
>>> To unsubscribe from the CCP4BB list, click the following link:
>>> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>>>
>>
>> -- 
>> ===
>> All Things Serve the Beam
>> ===
>>David J. Schuller
>>modern man in a post-modern world
>>MacCHESS, Cornell University
>>schul...@cornell.edu
>>
>> 
>>
>> To unsubscribe from the CCP4BB list, click the following link:
>> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>>
>>
>> 
>>
>> To unsubscribe from the CCP4BB list, click the following link:
>> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>>
>
>
> 
>
> To unsubscribe from the CCP4BB list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>
-- 

Industry and Medicine Applied Crystallography
Macromolecular Crystallography Unit
___
Phones : (351-21) 446-9100 Ext. 1669
 (351-21) 446-9669 (direct)
 Fax   : (351-21) 441-1277 or 443-3644

email : mat...@itqb.unl.pt

http://www.itqb.unl.pt/research/biological-chemistry/industry-and-medicine-applied-crystallography
http://www.itqb.unl.pt/labs/macromolecular-crystallography-unit

Mailing address :
Instituto de Tecnologia Quimica e Biologica António Xavier
Universidade Nova de Lisboa
Av. da República
2780-157 Oeiras
PORTUGAL

ITQB NOVA, a great choice for your PhD
https://youtu.be/de6j-aaTWNQ

Master Programme in Biochemistry for Health
https://youtu.be/UKstDCFjYI8




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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-06-03 Thread Matic Kisovec 
Hi,

thank you very much for this. Work fine on Ubuntu 19.04.

Kind regrds,
Matic


On 17. 05. 19 20:04, Arunabh Athreya wrote:
Thanks for sharing this.

Get Outlook for Android<https://aka.ms/ghei36>


From: CCP4 bulletin board <mailto:CCP4BB@JISCMAIL.AC.UK> 
on behalf of David Schuller <mailto:schul...@cornell.edu>
Sent: Thursday, May 16, 2019 11:41:19 PM
To: CCP4BB@JISCMAIL.AC.UK<mailto:CCP4BB@JISCMAIL.AC.UK>
Subject: Re: [ccp4bb] PyMOL now packaged as a snap on Linux

It seems to work on Fedora 30 and on Scientific Linux 7 (which means it should 
also work on RHEL7 and Centos 7)

Thank you.



On 5/16/19 10:47 AM, Darren Hart wrote:
Some more info:

https://snapcraft.io/pymol-oss

It seems to work exactly as expected.

Darren


On 16/05/2019 16:05, Folmer Fredslund wrote:
Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart 
mailto:darren.h...@ibs.fr>>:
Since yesterday, PyMOL (open source version v2.3) has been packaged as a
distro-independent "snap" that can be installed easily on linux
platforms - no more cloning from gitlab and compiling after installing
the dependencies.

On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If not, you
just need to install snapd in the regular way first (e.g. on Debian:
sudo apt install snapd).

Hope this is useful for some folks.

Best regards,

Darren



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--
===
All Things Serve the Beam
===
   David J. Schuller
   modern man in a post-modern world
   MacCHESS, Cornell University
   schul...@cornell.edu<mailto:schul...@cornell.edu>




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<>

Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-17 Thread Arunabh Athreya 
Thanks for sharing this.

Get Outlook for Android<https://aka.ms/ghei36>


From: CCP4 bulletin board  on behalf of David Schuller 

Sent: Thursday, May 16, 2019 11:41:19 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] PyMOL now packaged as a snap on Linux

It seems to work on Fedora 30 and on Scientific Linux 7 (which means it should 
also work on RHEL7 and Centos 7)

Thank you.



On 5/16/19 10:47 AM, Darren Hart wrote:
Some more info:

https://snapcraft.io/pymol-oss

It seems to work exactly as expected.

Darren


On 16/05/2019 16:05, Folmer Fredslund wrote:
Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart 
mailto:darren.h...@ibs.fr>>:
Since yesterday, PyMOL (open source version v2.3) has been packaged as a
distro-independent "snap" that can be installed easily on linux
platforms - no more cloning from gitlab and compiling after installing
the dependencies.

On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If not, you
just need to install snapd in the regular way first (e.g. on Debian:
sudo apt install snapd).

Hope this is useful for some folks.

Best regards,

Darren



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--
===
All Things Serve the Beam
===
   David J. Schuller
   modern man in a post-modern world
   MacCHESS, Cornell University
   schul...@cornell.edu<mailto:schul...@cornell.edu>




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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread David Schuller 
It seems to work on Fedora 30 and on Scientific Linux 7 (which means it 
should also work on RHEL7 and Centos 7)


Thank you.



On 5/16/19 10:47 AM, Darren Hart wrote:

Some more info:

https://snapcraft.io/pymol-oss

It seems to work exactly as expected.

Darren


On 16/05/2019 16:05, Folmer Fredslund wrote:

Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart >:


Since yesterday, PyMOL (open source version v2.3) has been
packaged as a
distro-independent "snap" that can be installed easily on linux
platforms - no more cloning from gitlab and compiling after
installing
the dependencies.

On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If
not, you
just need to install snapd in the regular way first (e.g. on Debian:
sudo apt install snapd).

Hope this is useful for some folks.

Best regards,

Darren



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===
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   MacCHESS, Cornell University
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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread Robbie Joosten 
Hi Pedro,

FC 23 has been end-of-life for 2.5 years now. You rally cannot expect it to be 
supported.

Cheers,
Robbie



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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread Pedro Matias 
Hi Darren et al.,

The snap doesn't seem to work with older Linux distros. I have FC23 on
my machine and even after installing snapd as per instructions found on
the web, the snap install does not work. I wonder if anyone had better
luck with these older Linux distributions...

Pedro

Às 12:01 de 16/05/2019, Darren Hart escreveu:
> Since yesterday, PyMOL (open source version v2.3) has been packaged as
> a distro-independent "snap" that can be installed easily on linux
> platforms - no more cloning from gitlab and compiling after installing
> the dependencies.
>
> On Ubuntu, install from software centre or:
>
> sudo snap install pymol-oss
>
> Many distros have the snap architecture already installed. If not, you
> just need to install snapd in the regular way first (e.g. on Debian:
> sudo apt install snapd).
>
> Hope this is useful for some folks.
>
> Best regards,
>
> Darren
>
> 
>
> To unsubscribe from the CCP4BB list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>
-- 

Industry and Medicine Applied Crystallography
Macromolecular Crystallography Unit
___
Phones : (351-21) 446-9100 Ext. 1669
 (351-21) 446-9669 (direct)
 Fax   : (351-21) 441-1277 or 443-3644

email : mat...@itqb.unl.pt

http://www.itqb.unl.pt/research/biological-chemistry/industry-and-medicine-applied-crystallography
http://www.itqb.unl.pt/labs/macromolecular-crystallography-unit

Mailing address :
Instituto de Tecnologia Quimica e Biologica António Xavier
Universidade Nova de Lisboa
Av. da República
2780-157 Oeiras
PORTUGAL

ITQB NOVA, a great choice for your PhD
https://youtu.be/de6j-aaTWNQ

Master Programme in Biochemistry for Health
https://youtu.be/UKstDCFjYI8



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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread Darren Hart 

Some more info:

https://snapcraft.io/pymol-oss

It seems to work exactly as expected.

Darren


On 16/05/2019 16:05, Folmer Fredslund wrote:

Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart >:


Since yesterday, PyMOL (open source version v2.3) has been
packaged as a
distro-independent "snap" that can be installed easily on linux
platforms - no more cloning from gitlab and compiling after
installing
the dependencies.

On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If not,
you
just need to install snapd in the regular way first (e.g. on Debian:
sudo apt install snapd).

Hope this is useful for some folks.

Best regards,

Darren



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Re: [ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread Folmer Fredslund 
Hi Darren,

That's brilliant!

I'll give it a spin and see how it works.

Best regards
Folmer


tor. 16. maj 2019 13.02 skrev Darren Hart :

> Since yesterday, PyMOL (open source version v2.3) has been packaged as a
> distro-independent "snap" that can be installed easily on linux
> platforms - no more cloning from gitlab and compiling after installing
> the dependencies.
>
> On Ubuntu, install from software centre or:
>
> sudo snap install pymol-oss
>
> Many distros have the snap architecture already installed. If not, you
> just need to install snapd in the regular way first (e.g. on Debian:
> sudo apt install snapd).
>
> Hope this is useful for some folks.
>
> Best regards,
>
> Darren
>
> 
>
> To unsubscribe from the CCP4BB list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1
>



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[ccp4bb] PyMOL now packaged as a snap on Linux

2019-05-16 Thread Darren Hart 
Since yesterday, PyMOL (open source version v2.3) has been packaged as a 
distro-independent "snap" that can be installed easily on linux 
platforms - no more cloning from gitlab and compiling after installing 
the dependencies.


On Ubuntu, install from software centre or:

sudo snap install pymol-oss

Many distros have the snap architecture already installed. If not, you 
just need to install snapd in the regular way first (e.g. on Debian: 
sudo apt install snapd).


Hope this is useful for some folks.

Best regards,

Darren



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