Re: [ccp4bb] ncsfind

[Clemens Vonrhein]

Hi Karin,

I find PROFESSS by Kevin Cowtan very easy to use:

  professs xyzin hatom.pdb xyzout professs.pdb < 
>Dear all,
> 
>Does anyone know if NCSFIND is still available or how I can get it. If
>not is there another program that I can use to determine
>noncrystallographic symmetry between Se-sites.
> 
>Thanks in advance,
> 
>Karin

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Re: [ccp4bb] ncsfind

[Mark Brooks]

Hello,
        If you have Phenix, try phenix.find_ncs (sorry for the non-CCP4 answer).

The example run in the PHENIX documentation is:
phenix.find_ncs anb.pdb mlt.mtz
This will then write out the NCS operators in various flavours.

Basically if you have a list of Se sites it calls RESOLVE, but has a
simpler, command-line interface.
http://www.phenix-online.org/documentation/find_ncs.htm#anch20
Good luck,
Mark

On 20 May 2010 23:47, Karin van Straaten  wrote:
>
> Dear all,
>
> Does anyone know if NCSFIND is still available or how I can get it. If not is 
> there another program that I can use to determine noncrystallographic 
> symmetry between Se-sites.
>
> Thanks in advance,
>
> Karin


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Skype: markabrooks

[ccp4bb] ncsfind

[Karin van Straaten]

Dear all,Does anyone know if NCSFIND is still available or how I can get it. If not is there another program that I can use to determine noncrystallographic symmetry between Se-sites.Thanks in advance,Karin