[CentOS] Strangely slow disk
I have a 1.5TB Western Digital hard disk (WD15EADS-00R6B0) on my CentOS-5.7 server, which has become incredibly slow for some operations, eg rsync, BackupPC archive, e2fsck, although it seems to work fine for ordinary file operations, and smartctl -a /dev/sdb does not report any errors. For example, running e2fsck -p /dev/sdb5 on a 250GB partition on this disk took over 24 hours to complete, as it did on another partition. I wonder if anyone can offer an explanation, or suggest a remedy? -- Timothy Murphy e-mail: gayleard /at/ eircom.net tel: +353-86-2336090, +353-1-2842366 s-mail: School of Mathematics, Trinity College Dublin ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
Just check smart table: smartctl -a -d ata /dev/sdX Sometimes disk work very slowly without any visible reason. In this case just replace your disk. On Sun, Dec 4, 2011 at 4:46 PM, Timothy Murphy gayle...@eircom.net wrote: I have a 1.5TB Western Digital hard disk (WD15EADS-00R6B0) on my CentOS-5.7 server, which has become incredibly slow for some operations, eg rsync, BackupPC archive, e2fsck, although it seems to work fine for ordinary file operations, and smartctl -a /dev/sdb does not report any errors. For example, running e2fsck -p /dev/sdb5 on a 250GB partition on this disk took over 24 hours to complete, as it did on another partition. I wonder if anyone can offer an explanation, or suggest a remedy? -- Timothy Murphy e-mail: gayleard /at/ eircom.net tel: +353-86-2336090, +353-1-2842366 s-mail: School of Mathematics, Trinity College Dublin ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos -- GPG Key ID: 6EC5EB27 ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
Check your bios, and make sure that you did not have IDE mode enabled and AHCI is selected . -Original Message- From: centos-boun...@centos.org [mailto:centos-boun...@centos.org] On Behalf Of Timothy Murphy Sent: Sunday, 4 December, 2011 8:46 PM To: centos@centos.org Subject: [CentOS] Strangely slow disk I have a 1.5TB Western Digital hard disk (WD15EADS-00R6B0) on my CentOS-5.7 server, which has become incredibly slow for some operations, eg rsync, BackupPC archive, e2fsck, although it seems to work fine for ordinary file operations, and smartctl -a /dev/sdb does not report any errors. For example, running e2fsck -p /dev/sdb5 on a 250GB partition on this disk took over 24 hours to complete, as it did on another partition. I wonder if anyone can offer an explanation, or suggest a remedy? -- Timothy Murphy e-mail: gayleard /at/ eircom.net tel: +353-86-2336090, +353-1-2842366 s-mail: School of Mathematics, Trinity College Dublin ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
On Sun, Dec 04, 2011 at 10:24:00PM +0800, Ho Chaw Ming wrote: Check your bios, and make sure that you did not have IDE mode enabled and AHCI is selected . Also, is this one of the Green series of WD disks? Those have a 4KB sector size, not the old/traditional 512B sector size. This has performance ramifications in that you must have partitions begin on a sector boundary or performance goes to the dogs. There are a number of articles about it on various geek sites, sorry I can't point you to one offhand. -- --- .Fred Smith / ( /__ ,__. __ __ / __ : / // / /__) / / /__) .+' Home: fre...@fcshome.stoneham.ma.us // (__ (___ (__(_ (___ / :__ 781-438-5471 Jude 1:24,25 - ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
On 12/04/11 11:08 AM, fred smith wrote: On Sun, Dec 04, 2011 at 10:24:00PM +0800, Ho Chaw Ming wrote: Check your bios, and make sure that you did not have IDE mode enabled and AHCI is selected . Also, is this one of the Green series of WD disks? Those have a 4KB sector size, not the old/traditional 512B sector size. This has performance ramifications in that you must have partitions begin on a sector boundary or performance goes to the dogs. There are a number of articles about it on various geek sites, sorry I can't point you to one offhand. many newer disks use this same 4k internal sectoring. the drives still *look* like they have 512 byte sectors to the outside world, but its very important for performance to get your partitions properly aligned on a 4k boundary, and ideally your file system uses 4K (or multiple of 4k) as its block size. sadly, the default fake CHS (cylinder head sector) mapping left over from legacy PC architectures ends up with a 255 512b sector 'track', and MBR partitioning defaults to using track or cylinder boundaries, so the first partition starts at an odd location if you use legacy tools like fdisk. -- john r pierceN 37, W 122 santa cruz ca mid-left coast ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
On 12/04/2011 01:08 PM, fred smith wrote: On Sun, Dec 04, 2011 at 10:24:00PM +0800, Ho Chaw Ming wrote: Check your bios, and make sure that you did not have IDE mode enabled and AHCI is selected . Also, is this one of the Green series of WD disks? Those have a 4KB sector size, not the old/traditional 512B sector size. This has performance ramifications in that you must have partitions begin on a sector boundary or performance goes to the dogs. There are a number of articles about it on various geek sites, sorry I can't point you to one offhand. The WDxxEADS drives have 512B sectors, _not_ 4KB sectors. -- Bob Nichols NOSPAM is really part of my email address. Do NOT delete it. ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
Timothy Murphy wrote: Check your bios, and make sure that you did not have IDE mode enabled and AHCI is selected . Thanks for your response, and for the others received. But I should have pointed out that the slow operation has only started recently, in the last week or so, after working normally since I acquired the disk a year or so ago. To add to the mystery, I just checked with hdparm, and the speed of the disk (as measured this way) seems normal, compared with various other disks: --- The slow disk [tim@helen ~]$ sudo hdparm -t /dev/sdb /dev/sdb: Timing buffered disk reads: 168 MB in 3.00 seconds = 55.98 MB/sec --- Another disk on the same machine [tim@blanche ~]$ sudo hdparm -t /dev/sda /dev/sda: Timing buffered disk reads: 146 MB in 3.01 seconds = 48.57 MB/sec --- An external hard disk attached to the same machine [tim@helen ~]$ sudo hdparm -t /dev/sdc /dev/sdc: Timing buffered disk reads: 54 MB in 3.03 seconds = 17.80 MB/sec --- I have Windows XP on another partition. I don't think I've ever used it (I always install Windows if it is not already on the machine, as I've had a couple of occasions when it has saved my life). I'll see how fast (or slow) Windows backup goes. -- Timothy Murphy e-mail: gayleard /at/ eircom.net tel: +353-86-2336090, +353-1-2842366 s-mail: School of Mathematics, Trinity College Dublin ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
Those are slowish times even for a 7200rpm disk. My desktop here at home (Ubuntu) has a slow 7200 drive and hdparam reports a lot faster than that. Well, it is a Caviar Green drive which means that 7200 is the fastest speed but it does spin slower too. amckay@amckay-desktop:~$ sudo !! sudo hdparm -t /dev/sda [sudo] password for amckay: /dev/sda: Timing buffered disk reads: 244 MB in 3.01 seconds = 81.10 MB/sec amckay@amckay-desktop:~$ -- “Don't eat anything you've ever seen advertised on TV” - Michael Pollan, author of In Defense of Food ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
You have not said anything yet in this thread about defragging that drive. I just checked your original message and your drive is the exact same as mine except yours is the 1.5 TB version and mine is 1.0. -- “Don't eat anything you've ever seen advertised on TV” - Michael Pollan, author of In Defense of Food ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
Also - boot a live Linux CD and then from there do hdparam again and compare results, If they differ vastly at least you know it is something in your running system which is the culprit. If they are roughly the same then it is likely the drive gone bad. Though check the man page for hdparam to see if disk fragmentation will affect the results it gives. -- “Don't eat anything you've ever seen advertised on TV” - Michael Pollan, author of In Defense of Food ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
Re: [CentOS] Strangely slow disk
On Sunday 04 December 2011 19:38, Timothy Murphy wrote: The slow disk [tim@helen ~]$ sudo hdparm -t /dev/sdb /dev/sdb: Timing buffered disk reads: 168 MB in 3.00 seconds = 55.98 MB/sec --- Another disk on the same machine [tim@blanche ~]$ sudo hdparm -t /dev/sda /dev/sda: Timing buffered disk reads: 146 MB in 3.01 seconds = 48.57 MB/sec Here are my results with a PATA drive and a SATA drive: [root@poontang ~]# hdparm -t /dev/hda /dev/hda: Timing buffered disk reads: 172 MB in 3.02 seconds = 56.97 MB/sec [root@poontang ~]# hdparm -t /dev/sda /dev/sda: Timing buffered disk reads: 300 MB in 3.01 seconds = 99.66 MB/sec Your results are similar to what I get with my PATA drive, so I agree with Ho Chaw Ming that you should check that AHCI is selected. -- Yves Bellefeuille y...@storm.ca La Esperanta Civito ne rifuzas anticipe la kunlaboron de erarintoj, se ili konscias pri sia eraro. -- Heroldo Komunikas, n-ro 473. ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos
