Re: [CF-metadata] standard_name modifiers

2011-02-28 Thread Schultz, Martin
Dear Jonathan et al.,

maybe I am fighting a lost battle here, but let me try to argue once more 
for a generalized solution, i.e. the addition of anomaly as a standard name 
modifier. I don't like the idea of adding a new standard name for each new 
anomaly: i) this seems illogical and new users will ask why is there an 
anomaly defined for temperature, but nor for precipitation?, ii) past 
experience has shown that it takes time to get new standard names adopted, and 
if new use cases come up (as they are bound to be for something as essential as 
anomalies) it may discourage people to even go for standard names for these 
variables. Why not try to make the system as systematic as possible? I don't 
want to argue against a pragmatic approach, but if you decide to change the 
anomalies from individual standard names to a modifier in three years, the 
effort might be much larger, the confusion will be greater and other 
operators with similar problems will come along. So, my suggestion would be 
to de
 precate the use of air_pressure_anomaly, air_temperature_anomaly, 
geopotential_height_anomaly and surface_temperature_anomaly now and introduce 
anomaly as a modifier. It's only replacing an underescore by a blank anyhow 
;-)

As we just developed some tools to compute multi-model means and model 
anomalies for the TFHTAP data sets, I would otherwise have to come up with a 
list of ~20 new _anomaly standard names. So, besides what I see a rational 
argument (above), I have a personal reason for arguing so vehemently.

Cheers,

Martin




Forschungszentrum Juelich GmbH
52425 Juelich
Sitz der Gesellschaft: Juelich
Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher
Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
Prof. Dr. Sebastian M. Schmidt


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Re: [CF-metadata] standard_name modifiers

2011-02-28 Thread Lowry, Roy K.
Hi Martin,

' It's only replacing an underescore by a blank anyhow ;-)'

This isn't strictly true.  As the semantics infrastructure stands at the moment 
the deprecation procedure is to label the deprecated Standard Name as an 
'alias' with another Standard Name specified as its replacement. 

I don't know about you, but I would feel a little uneasy about a Standard Names 
list that has 'surface_temperature_anomaly' aliased to 'surface_temperature'.

Cheers, Roy. 


-Original Message-
From: cf-metadata-boun...@cgd.ucar.edu 
[mailto:cf-metadata-boun...@cgd.ucar.edu] On Behalf Of Schultz, Martin
Sent: 28 February 2011 08:14
To: Jonathan Gregory
Cc: cf-metadata@cgd.ucar.edu
Subject: Re: [CF-metadata] standard_name modifiers

Dear Jonathan et al.,

maybe I am fighting a lost battle here, but let me try to argue once more 
for a generalized solution, i.e. the addition of anomaly as a standard name 
modifier. I don't like the idea of adding a new standard name for each new 
anomaly: i) this seems illogical and new users will ask why is there an 
anomaly defined for temperature, but nor for precipitation?, ii) past 
experience has shown that it takes time to get new standard names adopted, and 
if new use cases come up (as they are bound to be for something as essential as 
anomalies) it may discourage people to even go for standard names for these 
variables. Why not try to make the system as systematic as possible? I don't 
want to argue against a pragmatic approach, but if you decide to change the 
anomalies from individual standard names to a modifier in three years, the 
effort might be much larger, the confusion will be greater and other 
operators with similar problems will come along. So, my suggestion would be 
to de
 precate the use of air_pressure_anomaly, air_temperature_anomaly, 
geopotential_height_anomaly and surface_temperature_anomaly now and introduce 
anomaly as a modifier. It's only replacing an underescore by a blank anyhow 
;-)

As we just developed some tools to compute multi-model means and model 
anomalies for the TFHTAP data sets, I would otherwise have to come up with a 
list of ~20 new _anomaly standard names. So, besides what I see a rational 
argument (above), I have a personal reason for arguing so vehemently.

Cheers,

Martin




Forschungszentrum Juelich GmbH
52425 Juelich
Sitz der Gesellschaft: Juelich
Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher
Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
Prof. Dr. Sebastian M. Schmidt


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Re: [CF-metadata] standard_name modifiers -- units problem

2011-02-28 Thread Rosalyn Hatcher
I agree units should be set to 1 and I am currently in the process of 
fixing the error in the CF Checker.


Regards,
Ros.


On 27/02/11 17:27, Steven Emmerson wrote:

Cristina,

I recommend the unit 1 for that use.

If the CF checker doesn't like that unit, then it should be fixed, 
IMO, because that unit is supported by both the US NIST and the BIPM.


Regards,
Steve Emmerson
UDUNITS developer

On 2/26/2011 12:30 PM, cristina.tronc...@artov.isac.cnr.it wrote:

Dear Roy,
Our variable chlorophyll count as is understandable by CF is the
number of individual measurements used to determine a chlorophyll value.

I do need to know what to put at units attribute for that variable.
I undestood by the CF convention 1.4 (appendix C) that I have to put
units=1 as the chlorophyll count is a dimensionless variable...but
the CF checker found it as an error.

I try not to put the Unit attribute ...but again i get an error by che
cf chcker...so.

my question is: what unit shoudl I set for my chlorophyll count 
variable?


thanks for your help.

cristina

---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel: +39 06 49934342
cell: '39 349 1242954
Fax: +39 06 20660291
e-mail: cristina.tronc...@artov.isac.cnr.it


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NCAS Computational Modelling Services
Dept. of Meteorology, University of Reading,
Earley Gate, Reading. RG6 6BB
Email: r.s.hatc...@reading.ac.uk Tel: +44 (0) 118 378 6016

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Re: [CF-metadata] standard_name modifiers -- units problem

2011-02-28 Thread cristina . tronconi

Dear Rosalyn,
thanks so much for your reply and your works that is so important for  
me. Infact my data are produced within MYOCEAN (european) project  
and thay are going to test them! so it is important they do not failed  
the CF checker test.


Best regards.

cristina

p.s.
Sorry if sometime I miss some e-mails and I didin't answer to them.  
This is a very caotic working timeand I'm receiving so many e-mails.


Thanks to all the cf-metadata group to their help!

Citando Rosalyn Hatcher r.s.hatc...@reading.ac.uk:


I agree units should be set to 1 and I am currently in the process of
fixing the error in the CF Checker.

Regards,
Ros.


On 27/02/11 17:27, Steven Emmerson wrote:

Cristina,

I recommend the unit 1 for that use.

If the CF checker doesn't like that unit, then it should be fixed,   
IMO, because that unit is supported by both the US NIST and the BIPM.


Regards,
Steve Emmerson
UDUNITS developer

On 2/26/2011 12:30 PM, cristina.tronc...@artov.isac.cnr.it wrote:

Dear Roy,
Our variable chlorophyll count as is understandable by CF is the
number of individual measurements used to determine a chlorophyll value.

I do need to know what to put at units attribute for that variable.
I undestood by the CF convention 1.4 (appendix C) that I have to put
units=1 as the chlorophyll count is a dimensionless variable...but
the CF checker found it as an error.

I try not to put the Unit attribute ...but again i get an error by che
cf chcker...so.

my question is: what unit shoudl I set for my chlorophyll count variable?

thanks for your help.

cristina

---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel: +39 06 49934342
cell: '39 349 1242954
Fax: +39 06 20660291
e-mail: cristina.tronc...@artov.isac.cnr.it


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--
Rosalyn Hatcher
NCAS Computational Modelling Services
Dept. of Meteorology, University of Reading,
Earley Gate, Reading. RG6 6BB
Email: r.s.hatc...@reading.ac.uk Tel: +44 (0) 118 378 6016




---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel:  +39  06  49934342
cell: '39 349 1242954
Fax:  +39  06  20660291
e-mail:   cristina.tronc...@artov.isac.cnr.it


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Re: [CF-metadata] standard_name modifiers

2011-02-28 Thread John Graybeal
+1

This is a case where clearly the pragmatic approach is to do the systematic 
approach.

Probably can't formally deprecate the terms as Roy points out, but one could 
put in all of their definitions a pointer to the currently recommended 
practice.  

John

On Feb 28, 2011, at 00:14, Schultz, Martin wrote:

 Dear Jonathan et al.,
 
maybe I am fighting a lost battle here, but let me try to argue once more 
 for a generalized solution, i.e. the addition of anomaly as a standard name 
 modifier. I don't like the idea of adding a new standard name for each new 
 anomaly: i) this seems illogical and new users will ask why is there an 
 anomaly defined for temperature, but nor for precipitation?, ii) past 
 experience has shown that it takes time to get new standard names adopted, 
 and if new use cases come up (as they are bound to be for something as 
 essential as anomalies) it may discourage people to even go for standard 
 names for these variables. Why not try to make the system as systematic as 
 possible? I don't want to argue against a pragmatic approach, but if you 
 decide to change the anomalies from individual standard names to a modifier 
 in three years, the effort might be much larger, the confusion will be 
 greater and other operators with similar problems will come along. So, my 
 suggestion would be to d
 e
 precate the use of air_pressure_anomaly, air_temperature_anomaly, 
 geopotential_height_anomaly and surface_temperature_anomaly now and introduce 
 anomaly as a modifier. It's only replacing an underescore by a blank anyhow 
 ;-)
 
As we just developed some tools to compute multi-model means and model 
 anomalies for the TFHTAP data sets, I would otherwise have to come up with a 
 list of ~20 new _anomaly standard names. So, besides what I see a rational 
 argument (above), I have a personal reason for arguing so vehemently.
 
 Cheers,
 
 Martin
 
 
 
 
 Forschungszentrum Juelich GmbH
 52425 Juelich
 Sitz der Gesellschaft: Juelich
 Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
 Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher
 Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
 Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
 Prof. Dr. Sebastian M. Schmidt
 
 
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John Graybeal   mailto:jgrayb...@ucsd.edu 
phone: 858-534-2162
Product Manager
Ocean Observatories Initiative Cyberinfrastructure Project: 
http://ci.oceanobservatories.org
Marine Metadata Interoperability Project: http://marinemetadata.org   

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Re: [CF-metadata] standard_name modifiers -- units problem

2011-02-28 Thread Karl Taylor

Dear Rosalyn,

I assume the checker will also not complain if the units attribute is 
simply omitted when the variable is unitless (i.e., either units=1 or 
the attribute is omitted result in the same behavior by the checker).


best regards,
Karl

On 2/28/11 4:28 AM, cristina.tronc...@artov.isac.cnr.it wrote:

Dear Rosalyn,
thanks so much for your reply and your works that is so important for
me. Infact my data are produced within MYOCEAN (european) project
and thay are going to test them! so it is important they do not failed
the CF checker test.

Best regards.

cristina

p.s.
Sorry if sometime I miss some e-mails and I didin't answer to them.
This is a very caotic working timeand I'm receiving so many e-mails.

Thanks to all the cf-metadata group to their help!

Citando Rosalyn Hatcherr.s.hatc...@reading.ac.uk:


I agree units should be set to 1 and I am currently in the process of
fixing the error in the CF Checker.

Regards,
Ros.


On 27/02/11 17:27, Steven Emmerson wrote:

Cristina,

I recommend the unit 1 for that use.

If the CF checker doesn't like that unit, then it should be fixed,
IMO, because that unit is supported by both the US NIST and the BIPM.

Regards,
Steve Emmerson
UDUNITS developer

On 2/26/2011 12:30 PM, cristina.tronc...@artov.isac.cnr.it wrote:

Dear Roy,
Our variable chlorophyll count as is understandable by CF is the
number of individual measurements used to determine a chlorophyll value.

I do need to know what to put at units attribute for that variable.
I undestood by the CF convention 1.4 (appendix C) that I have to put
units=1 as the chlorophyll count is a dimensionless variable...but
the CF checker found it as an error.

I try not to put the Unit attribute ...but again i get an error by che
cf chcker...so.

my question is: what unit shoudl I set for my chlorophyll count variable?

thanks for your help.

cristina

---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel: +39 06 49934342
cell: '39 349 1242954
Fax: +39 06 20660291
e-mail: cristina.tronc...@artov.isac.cnr.it


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--
Rosalyn Hatcher
NCAS Computational Modelling Services
Dept. of Meteorology, University of Reading,
Earley Gate, Reading. RG6 6BB
Email: r.s.hatc...@reading.ac.uk Tel: +44 (0) 118 378 6016



---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel:  +39  06  49934342
cell: '39 349 1242954
Fax:  +39  06  20660291
e-mail:   cristina.tronc...@artov.isac.cnr.it


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Re: [CF-metadata] standard_name modifiers

2011-02-28 Thread Jonathan Gregory
Dear Martin

Even 24 such cases wouldn't be really a problem. However, I don't feel strongly
about this myself. This is not quite the original use of standard_name
modifiers, which is to describe variables containing ancillary quantities.
However, it seems to be a reasonable use of the mechanism, since it's a
derived quantity. (A combination of quantities would be more difficult to
deal with, as we have discussed.) I feel that opinions from others on whether
we should make this change would be helpful.

Best wishes

Jonathan

On Mon, Feb 28, 2011 at 09:14:18AM +0100, Schultz, Martin wrote:

 maybe I am fighting a lost battle here, but let me try to argue once more 
 for a generalized solution, i.e. the addition of anomaly as a standard name 
 modifier. I don't like the idea of adding a new standard name for each new 
 anomaly: i) this seems illogical and new users will ask why is there an 
 anomaly defined for temperature, but nor for precipitation?, ii) past 
 experience has shown that it takes time to get new standard names adopted, 
 and if new use cases come up (as they are bound to be for something as 
 essential as anomalies) it may discourage people to even go for standard 
 names for these variables. Why not try to make the system as systematic as 
 possible? I don't want to argue against a pragmatic approach, but if you 
 decide to change the anomalies from individual standard names to a modifier 
 in three years, the effort might be much larger, the confusion will be 
 greater and other operators with similar problems will come along. So, my 
 suggestion would be to 
 deprecate the use of air_pressure_anomaly, air_temperature_anomaly, 
geopotential_height_anomaly and surface_temperature_anomaly now and introduce 
anomaly as a modifier. It's only replacing an underescore by a blank anyhow 
;-)
 
 As we just developed some tools to compute multi-model means and model 
 anomalies for the TFHTAP data sets, I would otherwise have to come up with a 
 list of ~20 new _anomaly standard names. So, besides what I see a rational 
 argument (above), I have a personal reason for arguing so vehemently.
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Re: [CF-metadata] standard_name modifiers -- units problem

2011-02-28 Thread Rosalyn Hatcher

Dear Karl,

That is correct.  If the variable is deemed unitless, then the checker 
will not flag an error if either units=1 or the units attribute is omitted.
If the units attribute is missing, it will, however, produce an 
information message suggesting that the units attribute is added for 
completeness.


Eg.

--
Checking variable: CHL_count
--
INFO (3.1): No units attribute set.  Please consider adding a units attribute 
for completeness.


I introduced the INFO category of message a while ago, for instances 
where the checker couldn't be sure of an error (E.g. where an attribute 
is being used in a non-standard way), to prompt the user to double check 
that what they've put is actually what they meant.


I'll hopefully have a fixed version of the checker available tomorrow 
for testing.


Regards,
Ros.




On 28/02/11 16:44, Karl Taylor wrote:

Dear Rosalyn,

I assume the checker will also not complain if the units attribute is 
simply omitted when the variable is unitless (i.e., either units=1 
or the attribute is omitted result in the same behavior by the checker).


best regards,
Karl

On 2/28/11 4:28 AM, cristina.tronc...@artov.isac.cnr.it wrote:

Dear Rosalyn,
thanks so much for your reply and your works that is so important for
me. Infact my data are produced within MYOCEAN (european) project
and thay are going to test them! so it is important they do not failed
the CF checker test.

Best regards.

cristina

p.s.
Sorry if sometime I miss some e-mails and I didin't answer to them.
This is a very caotic working timeand I'm receiving so many e-mails.

Thanks to all the cf-metadata group to their help!

Citando Rosalyn Hatcherr.s.hatc...@reading.ac.uk:


I agree units should be set to 1 and I am currently in the process of
fixing the error in the CF Checker.

Regards,
Ros.


On 27/02/11 17:27, Steven Emmerson wrote:

Cristina,

I recommend the unit 1 for that use.

If the CF checker doesn't like that unit, then it should be fixed,
IMO, because that unit is supported by both the US NIST and the BIPM.

Regards,
Steve Emmerson
UDUNITS developer

On 2/26/2011 12:30 PM,cristina.tronc...@artov.isac.cnr.it  wrote:

Dear Roy,
Our variable chlorophyll count as is understandable by CF is the
number of individual measurements used to determine a chlorophyll value.

I do need to know what to put at units attribute for that variable.
I undestood by the CF convention 1.4 (appendix C) that I have to put
units=1 as the chlorophyll count is a dimensionless variable...but
the CF checker found it as an error.

I try not to put the Unit attribute ...but again i get an error by che
cf chcker...so.

my question is: what unit shoudl I set for my chlorophyll count variable?

thanks for your help.

cristina

---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel: +39 06 49934342
cell: '39 349 1242954
Fax: +39 06 20660291
e-mail:cristina.tronc...@artov.isac.cnr.it


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--
Rosalyn Hatcher
NCAS Computational Modelling Services
Dept. of Meteorology, University of Reading,
Earley Gate, Reading. RG6 6BB
Email:r.s.hatc...@reading.ac.uk  Tel: +44 (0) 118 378 6016


---
Cristina Tronconi
Istituto di Scienze dell'Atmosfera e del Clima - sezione di Roma
Consiglio Nazionale delle Ricerche
Via Fosso del Cavaliere 100
00133 Roma, Italy
Tel:  +39  06  49934342
cell: '39 349 1242954
Fax:  +39  06  20660291
e-mail:cristina.tronc...@artov.isac.cnr.it


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NCAS Computational Modelling Services
Dept. of Meteorology, University of Reading,
Earley Gate, Reading. RG6 6BB
Email: r.s.hatc...@reading.ac.uk Tel: +44 (0) 118 378 6016

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Re: [CF-metadata] Proposal for new standard names

2011-02-28 Thread Jonathan Gregory
Dear Philip and Tomoo

Philip's comments provide evidence that sedimentation indeed needs to be
clarified. Following these comments, would Tomoo's proposals be better as

tendency_of_mass_fraction_of_stratiform_cloud_liquid_water_in_air_
  due_to_precipitation_of_cloud_liquid_water .
tendency_of_mass_fraction_of_stratiform_cloud_condensed_water_in_air_
  due_to_precipitation_of_cloud_liquid_water

?

Best wishes

Jonathan
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Re: [CF-metadata] Proposal for new standard names

2011-02-28 Thread Tomoo Ogura

Dear Jonathan and Philip  Cc: Jen,

Many thanks for your comments.
My understanding of the issue is as follows (please correct me if I'm wrong).

The tendencies of cloud liquid (condensed) water represented by the proposed 
standard names refer to the slow falling process of cloud liquid water.
They have typical terminal fall speeds of less than 1 [m/s]. 
The fallen cloud liquid doesn't always reach the ground

; it often evaporates in the air.

There are fast falling processes of cloud liquid water, but they are represented 
by other existing standard names. For example,


(a) tendency_of_mass_fraction_of_stratiform_cloud_liquid_water_in_air
_due_to_autoconversion
and
(b) tendency_of_mass_fraction_of_stratiform_cloud_liquid_water_in_air
_due_to_accretion_to_rain 


both convert the slow-falling cloud liquid to fast-falling rain in GCMs.

In this case, it appears to me that we need some distinction on the basis of fall speed. 
If  precipitation implies that something falls to the earth's surface, 
then the slow falling process of cloud liquid may be represented by other words 
since it doesn't necessarily reach the surface 
- does this make sense?


Best wishes

Tomoo

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