Re: [CF-metadata] the need to store lat/lon coordinates in a CF-compliant netCDF file

2011-08-03 Thread John Caron

On 8/3/2011 8:19 AM, Jon Blower wrote:

Hi all,

I've been following this thread with great interest.  For me it boils down to 
this question:

  - Is the datum always known by the data provider?

If the answer is yes then I see no reason to omit the datum (and plenty of 
reasons to include it).  If there *are* situations where the datum is genuinely unknown 
or undefined then we need to express this clearly too so users can beware.

(Previous posts mentioned GCMs as possible situations where the datum is 
unknown - is this really true?  Surely there is always a sphere with a known 
radius on which coordinates are based?)

Cheers,
Jon

--
Dr Jon Blower
Technical Director, Reading e-Science Centre
Environmental Systems Science Centre
University of Reading, UK
Tel: +44 (0)118 378 5213
http://www.resc.reading.ac.uk


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Just to add to the above, there are 2 issues we are discussing:

1) possible recommendations by CF to always include the datum, and 
making sure we have the right metadata to do so.


2) possible recommendations by CF as to what to do if the datum is not 
present, or is only partially specified.


John
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[CF-metadata] [FRANCE] Question about CF Convention

2011-08-03 Thread Mazurier Alain
Hi all,

 

I am new on this mailing list and I hope my question is not so obvious

 

My problem is with: 

At the adress : 
http://cf-pcmdi.llnl.gov/conformance/requirements-and-recommendations/1.5/ I 
find

« 2.1 Filename

Requirements: 

*   Filename must have .nc suffix.

But If I read the CF documentation 
http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.5/cf-conventions-multi.html 
I find 


2.1. Filename


NetCDF files should have the file name extension .nc. 

For me there is a difference between must and should?. 

If i have another suffix than nc, can i be CF compliant?

Best regards

Alain MAZURIER
Responsable Unité Technologique Logicielle

 

Technopôle Brest Iroise
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29238 Brest Cedex 3
Tél : + 33 2 98 05 43 21
Tél direct: + 33 2 98 05 71 90
Mobile : 06 08 92 10 11
Fax : + 33 2 98 05 20 34
www.altran.com http://www.altran.com 

P Before printing, think about ENVIRONMENTAL responsibility

 

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Re: [CF-metadata] the need to store lat/lon coordinates in a CF-compliant netCDF file

2011-08-03 Thread David Blodgett
Correction to the datum/ellipsoid explanation below.

The NAD83 datum does use the GRS80 ellipsoid. The NAD27 datum uses the Clarke 
1866 ellipsoid. Woops!

Dave 

On Aug 3, 2011, at 9:07 AM, David Blodgett wrote:

 Dear Phil,
 
 I would have thought that if a particular piece of
 data analysis is at a resolution that requires a geodetic datum to be
 specified then,
 
 The problem here is that there is no analysis that does not require this 
 information. While some choose to assume that all data uses the same datum 
 and drop those terms of analysis out of their math, that does not mean the 
 information is not there.
 
 giving the user the
 opportunity to select the one s/he believes to be the most appropriate
 for the task in hand.
 
 
 Having personally been in this situation, it took me two years to track down 
 exactly the right geographic transformation to apply to accurately apply 
 radar data to the landscape. It is unfair to expect that a terrestrial 
 modeler understand the handling of geographic data in climate and forecasting 
 applications to such an extent that they are comfortable making such a 
 decision.
 
 Your argument about darwinian evolution of data use would cause a massive set 
 back in interdisciplinary science. This one minor inclusion of necessary 
 metadata would allow a broad community of users to more easily leverage data 
 using the climate and forecasting metadata conventions. Since the CF 
 community does disregard datum metadata, they could continue to silo 
 themselves from the rest of the environmental modeling community. Or, they 
 could extend a bit of an olive branch and recognize that this information is 
 critical and required for most terrestrial applications that consume 
 atmospheric data.
 
 Regarding the difference between GRS 80 and WGS 84 ellipsoids, they are 
 different by small fractions of a meter. 
 From wikipedia: The very small difference in the flattening thus results in 
 a—very theoretical—difference of 0.105 mm in the semi polar axis. For most 
 purposes, the differing polar axes can be merged to 6 356 752.3 m, with the 
 inverse flattening rounded to 298.257.
 
 
 You are referring to the NAD83 Datum which uses the Clarke 1866 ellipsoid 
 which does fit the continental united states better than the GRS80/WGS84 
 ellipsoid. 
 
 Cheers,
 
 Dave B
 
 On Aug 3, 2011, at 8:48 AM, Bentley, Philip wrote:
 
 Dear Heiko,
 
 I hope CF could define a default datum, e.g. the GRS1980 
 Authalic Sphere, since this matches most closely with 
 existing software (netcdf-java). This would make live easier 
 for the software-developers who have to use something if 
 nothing is given.
 
 I'm not sure that defining a default datum for CF is the right way to go
 in this instance. I would have thought that if a particular piece of
 data analysis is at a resolution that requires a geodetic datum to be
 specified then, in absentia the actual one being defined in metadata,
 it's not clear to me that using some semi-arbitrary, and potentially
 invalid, default datum is any better than giving the user the
 opportunity to select the one s/he believes to be the most appropriate
 for the task in hand.
 
 The current CF conventions include a (fairly minimal) set of metadata
 attributes which can be used to describe the basic properties of the
 coordinate reference system associated with a given dataset. The onus
 then is on data producers to utilise those metadata attributes to
 describe their data to the fullest extent possible. Furthermore, other
 non-CF attributes may be used to augment the standard set - over time
 some of these additional attributes would no doubt find their way into
 the CF specification.
 
 Ultimately, if end-users consider that a given dataset has insufficient
 metadata to justify its use within a particular context, then they can
 always choose to ignore that dataset. With the passage of time - and in
 true Darwinian fashion - such datasets (and their producers) will find
 that they are increasingly disregarded/overlooked in analyses. Hopefully
 this would galvanise such data producers into improving the quality of
 their spatial metadata!
 
 Regards,
 Phil
 
 
 PS: if a default datum were to be encoded into the CF conventions, I'd
 imagine that the WGS84 datum would be the way to go rather than GRS80
 which, if I understand correctly, has somewhat more of a bias towards
 use over the North American continent. That said, I suspect the
 differences between the 2 datums are sufficiently small as to get lost
 in the underflow for many metocean research applications.
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Re: [CF-metadata] CF-metadata Digest, Vol 100, Issue 2

2011-08-03 Thread Comiskey, Glenn
Bonjour Alain,

Being new to the world of meteorological/oceangraphic data myself
recently, I had the same problem you have when reading the various
conventions available. Based upon discussions about this matter, and how
others are using and interpretating the conventions, I personally have
adopted a position whereby the term should is regarded as a mandatory
requirement. That is to say I interpret should as must.

While I agree that the general definition of should would imply
something being optional, the general definition also implies a strong
sense of obligation. That is to say you must do something unless you
have a good reason not to, i.e. I should not kill anyone (I use this as
an example of how strongly should could be regarded as obligatory,
rather than my homicidal tendencies :-)

Hope this helps, though I am sure others will also comment.

Salut,

Glenn

--

Message: 6
Date: Wed, 3 Aug 2011 16:31:11 +0200
From: Mazurier Alain alain.mazur...@altran.com
Subject: [CF-metadata] [FRANCE] Question about CF Convention
To: cf-metadata@cgd.ucar.edu
Message-ID:

ee5e0b0870aeb74bbf8c9c7bddc9c06004646...@xvs-dcfr-23.europe.corp.altran
.com

Content-Type: text/plain; charset=iso-8859-1

Hi all,
I am new on this mailing list and I hope my question is not so obvious
My problem is with: 
At the adress :
http://cf-pcmdi.llnl.gov/conformance/requirements-and-recommendations/1.
5/ I find
? 2.1 Filename
Requirements: 
*   Filename must have .nc suffix.
But If I read the CF documentation
http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.5/cf-conventions-mul
ti.html I find 
2.1. Filename
NetCDF files should have the file name extension .nc. 
For me there is a difference between must and should?. 
If i have another suffix than nc, can i be CF compliant?
Best regards
Alain MAZURIER
Responsable Unit Technologique Logicielle
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Re: [CF-metadata] the need to store lat/lon coordinates in a CF-compliant netCDF file

2011-08-03 Thread Jon Blower
OK, so this is a use case for an unknown (as opposed to a deliberately 
unspecified) datum I guess?


 Almost certainly, but by a comparatively small number of individuals within 
 an organisation I would guess.

All the more reason to encourage people to encode it in NetCDF files!  ;-)

Jon

-Original Message-
From: Bentley, Philip [mailto:philip.bent...@metoffice.gov.uk] 
Sent: 03 August 2011 16:18
To: Jon Blower; cf-metadata@cgd.ucar.edu
Subject: RE: [CF-metadata] the need to store lat/lon coordinates in a 
CF-compliant netCDF file

Hi Jon, 

 I've been following this thread with great interest.  For me it boils 
 down to this question:
 
  - Is the datum always known by the data provider?

Almost certainly, but by a comparatively small number of individuals within an 
organisation I would guess. However - and here's the blocker - probably not by 
many/enough of the people who have the (let's be frank) unglamorous job of 
compiling metadata for large volumes of spatial data.

 
 If the answer is yes then I see no reason to omit the datum (and 
 plenty of reasons to include it).  If there *are* situations where the 
 datum is genuinely unknown or undefined then we need to express this 
 clearly too so users can beware.
 
 (Previous posts mentioned GCMs as possible situations where the datum 
 is unknown - is this really true?  Surely there is always a sphere 
 with a known radius on which coordinates are based?)
 
That would be my assumption also - that the raw facts are always known.

In my experience the problem tends to be organisational rather than technical. 
Few organisations seem to employ staff whose lapel badge reads 'Spatial 
Metadata Operative'. Which is, I realise, a pretty lame excuse. Anyhows, I'm 
drifting off topic.

Cheers,
Phil
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[CF-metadata] [FRANCE] Question about CF Convention

2011-08-03 Thread Comiskey, Glenn
Alain,

Further to my earlier comment, and to address your question regarding
file name suffix, my company makes data available via THREDDS and ERDDAP
neither of which I have found has any problem using files that do not
have a .nc suffix. When editing the metadata for files to be published
via THREDDS and ERDDAP the use of other file suffix, such as .grb for
GRIB files, has not caused any issues or stopped us from state
conformance with conventions such as CF.

Regards,

Glenn

-Original Message-
From: Comiskey, Glenn 
Sent: 03 August 2011 16:19
To: 'cf-metadata@cgd.ucar.edu'
Cc: 'alain.mazur...@altran.com'
Subject: RE: CF-metadata Digest, Vol 100, Issue 2

Bonjour Alain,
Being new to the world of meteorological/oceangraphic data myself
recently, I had the same problem you have when reading the various
conventions available. Based upon discussions about this matter, and how
others are using and interpretating the conventions, I personally have
adopted a position whereby the term should is regarded as a mandatory
requirement. That is to say I interpret should as must.
While I agree that the general definition of should would imply
something being optional, the general definition also implies a strong
sense of obligation. That is to say you must do something unless you
have a good reason not to, i.e. I should not kill anyone (I use this as
an example of how strongly should could be regarded as obligatory,
rather than my homicidal tendencies :-)
Hope this helps, though I am sure others will also comment.
Salut,
Glenn

--

Message: 6
Date: Wed, 3 Aug 2011 16:31:11 +0200
From: Mazurier Alain alain.mazur...@altran.com
Subject: [CF-metadata] [FRANCE] Question about CF Convention
To: cf-metadata@cgd.ucar.edu
Message-ID:

ee5e0b0870aeb74bbf8c9c7bddc9c06004646...@xvs-dcfr-23.europe.corp.altran
.com

Content-Type: text/plain; charset=iso-8859-1

Hi all,
I am new on this mailing list and I hope my question is not so obvious
My problem is with: 
At the adress :
http://cf-pcmdi.llnl.gov/conformance/requirements-and-recommendations/1.
5/ I find ? 2.1 Filename
Requirements: 
*   Filename must have .nc suffix.
But If I read the CF documentation
http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.5/cf-conventions-mul
ti.html I find 2.1. Filename NetCDF files should have the file name
extension .nc. 
For me there is a difference between must and should?. 
If i have another suffix than nc, can i be CF compliant?
Best regards
Alain MAZURIER
Responsable Unit Technologique Logicielle
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Re: [CF-metadata] [FRANCE] Question about CF Convention

2011-08-03 Thread Mazurier Alain
Glenn

Thanks for your comments. The nc suffix was an example, but I found other cases 
in the documentation.
I found a lot of differences between the convention and the list of 
requirements and recommendations.

My work is to highlight the differences between a netcdf file (bathymetric 
data) and the CF convention
And what is the way to make these files CF compliant...


Best regards

Alain MAZURIER
Responsable Unité Technologique Logicielle



Technopôle Brest Iroise
Site du Vernis – CS 23866
29238 Brest Cedex 3
Tél : + 33 2 98 05 43 21
Tél direct: + 33 2 98 05 71 90
Mobile : 06 08 92 10 11
Fax : + 33 2 98 05 20 34
www.altran.com
 Before printing, think about ENVIRONMENTAL responsibility


-Message d'origine-
De : Comiskey, Glenn [mailto:g.comis...@geos.com] 
Envoyé : mercredi 3 août 2011 17:48
À : cf-metadata@cgd.ucar.edu
Cc : Mazurier Alain
Objet : [FRANCE] Question about CF Convention

Alain,

Further to my earlier comment, and to address your question regarding
file name suffix, my company makes data available via THREDDS and ERDDAP
neither of which I have found has any problem using files that do not
have a .nc suffix. When editing the metadata for files to be published
via THREDDS and ERDDAP the use of other file suffix, such as .grb for
GRIB files, has not caused any issues or stopped us from state
conformance with conventions such as CF.

Regards,

Glenn

-Original Message-
From: Comiskey, Glenn 
Sent: 03 August 2011 16:19
To: 'cf-metadata@cgd.ucar.edu'
Cc: 'alain.mazur...@altran.com'
Subject: RE: CF-metadata Digest, Vol 100, Issue 2

Bonjour Alain,
Being new to the world of meteorological/oceangraphic data myself
recently, I had the same problem you have when reading the various
conventions available. Based upon discussions about this matter, and how
others are using and interpretating the conventions, I personally have
adopted a position whereby the term should is regarded as a mandatory
requirement. That is to say I interpret should as must.
While I agree that the general definition of should would imply
something being optional, the general definition also implies a strong
sense of obligation. That is to say you must do something unless you
have a good reason not to, i.e. I should not kill anyone (I use this as
an example of how strongly should could be regarded as obligatory,
rather than my homicidal tendencies :-)
Hope this helps, though I am sure others will also comment.
Salut,
Glenn

--

Message: 6
Date: Wed, 3 Aug 2011 16:31:11 +0200
From: Mazurier Alain alain.mazur...@altran.com
Subject: [CF-metadata] [FRANCE] Question about CF Convention
To: cf-metadata@cgd.ucar.edu
Message-ID:

ee5e0b0870aeb74bbf8c9c7bddc9c06004646...@xvs-dcfr-23.europe.corp.altran
.com

Content-Type: text/plain; charset=iso-8859-1

Hi all,
I am new on this mailing list and I hope my question is not so obvious
My problem is with: 
At the adress :
http://cf-pcmdi.llnl.gov/conformance/requirements-and-recommendations/1.
5/ I find ? 2.1 Filename
Requirements: 
*   Filename must have .nc suffix.
But If I read the CF documentation
http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.5/cf-conventions-mul
ti.html I find 2.1. Filename NetCDF files should have the file name
extension .nc. 
For me there is a difference between must and should?. 
If i have another suffix than nc, can i be CF compliant?
Best regards
Alain MAZURIER
Responsable Unit Technologique Logicielle
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Re: [CF-metadata] the need to store lat/lon coordinates in a CF-compliant netCDF file

2011-08-03 Thread Upendra . Dadi
Hi,

- Original Message -
From: Bentley, Philip philip.bent...@metoffice.gov.uk
Date: Wednesday, August 3, 2011 11:17 am
Subject: Re: [CF-metadata] the need to store lat/lon coordinates in a 
CF-compliant netCDF file

 Hi Jon, 
 
  I've been following this thread with great interest.  For me 
  it boils down to this question:
  
   - Is the datum always known by the data provider?
Tthe World Ocean Database ( http://www.nodc.noaa.gov/OC5/WOD09/pr_wod09.html ), 
which is creating by aggregating and standardizing datasets collected over a 
long period of time, has some datasets which go all the way back to the time of 
James Cook. Some of these datasets, I am certain, have datum which is not 
known.  But, I think the provider could still give a best guess for what the 
datum could have been with adequate qualification instead of leaving it to the 
user to select arbitrary datum.

Upendra


 
 Almost certainly, but by a comparatively small number of individuals
 within an organisation I would guess. However - and here's the 
 blocker -
 probably not by many/enough of the people who have the (let's be 
 frank)unglamorous job of compiling metadata for large volumes of 
 spatial data.
 
  
  If the answer is yes then I see no reason to omit the datum 
  (and plenty of reasons to include it).  If there *are* 
  situations where the datum is genuinely unknown or undefined 
  then we need to express this clearly too so users can beware.
  
  (Previous posts mentioned GCMs as possible situations where 
  the datum is unknown - is this really true?  Surely there is 
  always a sphere with a known radius on which coordinates are based?)
  
 That would be my assumption also - that the raw facts are always 
 known.
 In my experience the problem tends to be organisational rather than
 technical. Few organisations seem to employ staff whose lapel badge
 reads 'Spatial Metadata Operative'. Which is, I realise, a pretty lame
 excuse. Anyhows, I'm drifting off topic.
 
 Cheers,
 Phil
 ___
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