[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-17 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304684637
 
 

 ##
 File path: 
indexing-service/src/main/java/org/apache/druid/indexing/worker/IntermediaryDataManager.java
 ##
 @@ -0,0 +1,310 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.indexing.worker;
+
+import com.google.common.collect.Iterators;
+import com.google.common.io.Files;
+import com.google.inject.Inject;
+import org.apache.commons.io.FileUtils;
+import org.apache.commons.lang3.mutable.MutableInt;
+import org.apache.druid.client.indexing.IndexingServiceClient;
+import org.apache.druid.client.indexing.TaskStatus;
+import org.apache.druid.guice.ManageLifecycle;
+import org.apache.druid.indexing.common.config.TaskConfig;
+import org.apache.druid.indexing.worker.config.WorkerConfig;
+import org.apache.druid.java.util.common.DateTimes;
+import org.apache.druid.java.util.common.IOE;
+import org.apache.druid.java.util.common.ISE;
+import org.apache.druid.java.util.common.concurrent.Execs;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStart;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStop;
+import org.apache.druid.java.util.common.logger.Logger;
+import org.apache.druid.segment.loading.StorageLocation;
+import org.apache.druid.timeline.DataSegment;
+import org.joda.time.DateTime;
+import org.joda.time.Interval;
+import org.joda.time.Period;
+
+import javax.annotation.Nullable;
+import java.io.File;
+import java.io.IOException;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Map.Entry;
+import java.util.Set;
+import java.util.concurrent.ConcurrentHashMap;
+import java.util.concurrent.ScheduledExecutorService;
+import java.util.concurrent.TimeUnit;
+import java.util.stream.Collectors;
+
+/**
+ * This class manages intermediary segments for data shuffle between native 
parallel index tasks.
+ * In native parallel indexing, phase 1 tasks store segment files in local 
storage of middleManagers
+ * and phase 2 tasks read those files via HTTP.
+ *
+ * The directory where segment files are placed is structured as
+ * {@link 
StorageLocation#path}/supervisorTaskId/startTimeOfSegment/endTimeOfSegment/partitionIdOfSegment.
+ *
+ * This class provides interfaces to store, find, and remove segment files.
+ * It also has a self-cleanup mechanism to clean up stale segment files. It 
periodically checks the last access time
+ * per supervisorTask and removes its all segment files if the supervisorTask 
is not running anymore.
+ */
+@ManageLifecycle
+public class IntermediaryDataManager
+{
+  private static final Logger log = new Logger(IntermediaryDataManager.class);
+
+  private final long intermediaryPartitionDiscoveryPeriodSec;
+  private final long intermediaryPartitionCleanupPeriodSec;
+  private final Period intermediaryPartitionTimeout;
+  private final List shuffleDataLocations;
+  private final IndexingServiceClient indexingServiceClient;
+
+  // supervisorTaskId -> time to check supervisorTask status
+  // This time is initialized when a new supervisorTask is found and updated 
whenever a partition is accessed for
+  // the supervisor.
+  private final ConcurrentHashMap supervisorTaskCheckTimes = 
new ConcurrentHashMap<>();
+
+  // supervisorTaskId -> cyclic iterator of storage locations
+  private final Map> locationIterators = new 
HashMap<>();
+
+  // The overlord is supposed to send a cleanup request as soon as the 
supervisorTask is finished in parallel indexing,
+  // but middleManager or indexer could miss the request. This executor is to 
automatically clean up unused intermediary
+  // partitions.
+  // This can be null until IntermediaryDataManager is started.
+  @Nullable
+  private ScheduledExecutorService supervisorTaskChecker;
+
+  @Inject
+  public IntermediaryDataManager(
+  WorkerConfig workerConfig,
+  TaskConfig taskConfig,
+  IndexingServiceClient indexingServiceClient
+  )
+  {
+this.intermediaryPartitio

[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-17 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304684720
 
 

 ##
 File path: 
indexing-service/src/main/java/org/apache/druid/indexing/worker/IntermediaryDataManager.java
 ##
 @@ -0,0 +1,310 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.indexing.worker;
+
+import com.google.common.collect.Iterators;
+import com.google.common.io.Files;
+import com.google.inject.Inject;
+import org.apache.commons.io.FileUtils;
+import org.apache.commons.lang3.mutable.MutableInt;
+import org.apache.druid.client.indexing.IndexingServiceClient;
+import org.apache.druid.client.indexing.TaskStatus;
+import org.apache.druid.guice.ManageLifecycle;
+import org.apache.druid.indexing.common.config.TaskConfig;
+import org.apache.druid.indexing.worker.config.WorkerConfig;
+import org.apache.druid.java.util.common.DateTimes;
+import org.apache.druid.java.util.common.IOE;
+import org.apache.druid.java.util.common.ISE;
+import org.apache.druid.java.util.common.concurrent.Execs;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStart;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStop;
+import org.apache.druid.java.util.common.logger.Logger;
+import org.apache.druid.segment.loading.StorageLocation;
+import org.apache.druid.timeline.DataSegment;
+import org.joda.time.DateTime;
+import org.joda.time.Interval;
+import org.joda.time.Period;
+
+import javax.annotation.Nullable;
+import java.io.File;
+import java.io.IOException;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Map.Entry;
+import java.util.Set;
+import java.util.concurrent.ConcurrentHashMap;
+import java.util.concurrent.ScheduledExecutorService;
+import java.util.concurrent.TimeUnit;
+import java.util.stream.Collectors;
+
+/**
+ * This class manages intermediary segments for data shuffle between native 
parallel index tasks.
+ * In native parallel indexing, phase 1 tasks store segment files in local 
storage of middleManagers
+ * and phase 2 tasks read those files via HTTP.
+ *
+ * The directory where segment files are placed is structured as
+ * {@link 
StorageLocation#path}/supervisorTaskId/startTimeOfSegment/endTimeOfSegment/partitionIdOfSegment.
+ *
+ * This class provides interfaces to store, find, and remove segment files.
+ * It also has a self-cleanup mechanism to clean up stale segment files. It 
periodically checks the last access time
+ * per supervisorTask and removes its all segment files if the supervisorTask 
is not running anymore.
+ */
+@ManageLifecycle
+public class IntermediaryDataManager
+{
+  private static final Logger log = new Logger(IntermediaryDataManager.class);
+
+  private final long intermediaryPartitionDiscoveryPeriodSec;
+  private final long intermediaryPartitionCleanupPeriodSec;
+  private final Period intermediaryPartitionTimeout;
+  private final List shuffleDataLocations;
+  private final IndexingServiceClient indexingServiceClient;
+
+  // supervisorTaskId -> time to check supervisorTask status
+  // This time is initialized when a new supervisorTask is found and updated 
whenever a partition is accessed for
+  // the supervisor.
+  private final ConcurrentHashMap supervisorTaskCheckTimes = 
new ConcurrentHashMap<>();
+
+  // supervisorTaskId -> cyclic iterator of storage locations
+  private final Map> locationIterators = new 
HashMap<>();
+
+  // The overlord is supposed to send a cleanup request as soon as the 
supervisorTask is finished in parallel indexing,
+  // but middleManager or indexer could miss the request. This executor is to 
automatically clean up unused intermediary
+  // partitions.
+  // This can be null until IntermediaryDataManager is started.
+  @Nullable
+  private ScheduledExecutorService supervisorTaskChecker;
+
+  @Inject
+  public IntermediaryDataManager(
+  WorkerConfig workerConfig,
+  TaskConfig taskConfig,
+  IndexingServiceClient indexingServiceClient
+  )
+  {
+this.intermediaryPartitio

[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-17 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304684892
 
 

 ##
 File path: 
indexing-service/src/main/java/org/apache/druid/indexing/worker/IntermediaryDataManager.java
 ##
 @@ -0,0 +1,310 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.indexing.worker;
+
+import com.google.common.collect.Iterators;
+import com.google.common.io.Files;
+import com.google.inject.Inject;
+import org.apache.commons.io.FileUtils;
+import org.apache.commons.lang3.mutable.MutableInt;
+import org.apache.druid.client.indexing.IndexingServiceClient;
+import org.apache.druid.client.indexing.TaskStatus;
+import org.apache.druid.guice.ManageLifecycle;
+import org.apache.druid.indexing.common.config.TaskConfig;
+import org.apache.druid.indexing.worker.config.WorkerConfig;
+import org.apache.druid.java.util.common.DateTimes;
+import org.apache.druid.java.util.common.IOE;
+import org.apache.druid.java.util.common.ISE;
+import org.apache.druid.java.util.common.concurrent.Execs;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStart;
+import org.apache.druid.java.util.common.lifecycle.LifecycleStop;
+import org.apache.druid.java.util.common.logger.Logger;
+import org.apache.druid.segment.loading.StorageLocation;
+import org.apache.druid.timeline.DataSegment;
+import org.joda.time.DateTime;
+import org.joda.time.Interval;
+import org.joda.time.Period;
+
+import javax.annotation.Nullable;
+import java.io.File;
+import java.io.IOException;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.Iterator;
+import java.util.List;
+import java.util.Map;
+import java.util.Map.Entry;
+import java.util.Set;
+import java.util.concurrent.ConcurrentHashMap;
+import java.util.concurrent.ScheduledExecutorService;
+import java.util.concurrent.TimeUnit;
+import java.util.stream.Collectors;
+
+/**
+ * This class manages intermediary segments for data shuffle between native 
parallel index tasks.
+ * In native parallel indexing, phase 1 tasks store segment files in local 
storage of middleManagers
+ * and phase 2 tasks read those files via HTTP.
+ *
+ * The directory where segment files are placed is structured as
+ * {@link 
StorageLocation#path}/supervisorTaskId/startTimeOfSegment/endTimeOfSegment/partitionIdOfSegment.
+ *
+ * This class provides interfaces to store, find, and remove segment files.
+ * It also has a self-cleanup mechanism to clean up stale segment files. It 
periodically checks the last access time
+ * per supervisorTask and removes its all segment files if the supervisorTask 
is not running anymore.
+ */
+@ManageLifecycle
+public class IntermediaryDataManager
+{
+  private static final Logger log = new Logger(IntermediaryDataManager.class);
+
+  private final long intermediaryPartitionDiscoveryPeriodSec;
+  private final long intermediaryPartitionCleanupPeriodSec;
+  private final Period intermediaryPartitionTimeout;
+  private final List shuffleDataLocations;
+  private final IndexingServiceClient indexingServiceClient;
+
+  // supervisorTaskId -> time to check supervisorTask status
+  // This time is initialized when a new supervisorTask is found and updated 
whenever a partition is accessed for
+  // the supervisor.
+  private final ConcurrentHashMap supervisorTaskCheckTimes = 
new ConcurrentHashMap<>();
+
+  // supervisorTaskId -> cyclic iterator of storage locations
+  private final Map> locationIterators = new 
HashMap<>();
+
+  // The overlord is supposed to send a cleanup request as soon as the 
supervisorTask is finished in parallel indexing,
+  // but middleManager or indexer could miss the request. This executor is to 
automatically clean up unused intermediary
+  // partitions.
+  // This can be null until IntermediaryDataManager is started.
+  @Nullable
+  private ScheduledExecutorService supervisorTaskChecker;
+
+  @Inject
+  public IntermediaryDataManager(
+  WorkerConfig workerConfig,
+  TaskConfig taskConfig,
+  IndexingServiceClient indexingServiceClient
+  )
+  {
+this.intermediaryPartitio

[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-17 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304674327
 
 

 ##
 File path: 
indexing-service/src/main/java/org/apache/druid/indexing/worker/http/ShuffleResource.java
 ##
 @@ -0,0 +1,122 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.indexing.worker.http;
+
+import com.google.common.io.ByteStreams;
+import com.google.inject.Inject;
+import com.sun.jersey.spi.container.ResourceFilters;
+import org.apache.druid.indexing.worker.IntermediaryDataManager;
+import org.apache.druid.java.util.common.DateTimes;
+import org.apache.druid.java.util.common.StringUtils;
+import org.apache.druid.java.util.common.logger.Logger;
+import org.apache.druid.server.http.security.StateResourceFilter;
+import org.joda.time.Interval;
+
+import javax.ws.rs.DELETE;
+import javax.ws.rs.GET;
+import javax.ws.rs.Path;
+import javax.ws.rs.PathParam;
+import javax.ws.rs.Produces;
+import javax.ws.rs.QueryParam;
+import javax.ws.rs.core.MediaType;
+import javax.ws.rs.core.Response;
+import javax.ws.rs.core.Response.Status;
+import javax.ws.rs.core.StreamingOutput;
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.IOException;
+import java.util.List;
+
+/**
+ * HTTP endpoints for shuffle system. The MiddleManager and Indexer use this 
resource to serve intermediary shuffle
+ * data.
+ *
+ * We use {@link StateResourceFilter} here because it performs an admin-like 
authorization and
+ * all endpoints here are supposed to be used for only internal communcation.
+ * Another possible alternate could be performing datasource-level 
authorization as in TaskResourceFilter.
+ * However, datasource information is not available in middleManagers or 
indexers yet which makes hard to use it.
+ * We could develop a new ResourceFileter in the future if needed.
 
 Review comment:
   :+1:


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[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-16 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304204101
 
 

 ##
 File path: 
server/src/main/java/org/apache/druid/server/http/security/TaskShuffleResourceFilter.java
 ##
 @@ -0,0 +1,72 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.server.http.security;
+
+import com.google.common.base.Preconditions;
+import com.google.inject.Inject;
+import com.sun.jersey.spi.container.ContainerRequest;
+import org.apache.druid.server.security.Access;
+import org.apache.druid.server.security.AuthorizationUtils;
+import org.apache.druid.server.security.AuthorizerMapper;
+import org.apache.druid.server.security.ForbiddenException;
+import org.apache.druid.server.security.Resource;
+import org.apache.druid.server.security.ResourceAction;
+import org.apache.druid.server.security.ResourceType;
+
+/**
+ * This resource filter is used for data shuffle between native parallel index 
tasks. See ShuffleResource for details.
+ *
+ * It currently performs the authorization check for DATASOURCE, but ideally, 
it should be the authorization check
+ * for task data. This issue should be addressed in the future.
 
 Review comment:
   Could you clarify in these javadocs that I think you are referring to this 
should be doing what `TaskResourceFilter` is doing?


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[GitHub] [incubator-druid] clintropolis commented on a change in pull request #8088: Add intermediary data server for shuffle

2019-07-16 Thread GitBox
clintropolis commented on a change in pull request #8088: Add intermediary data 
server for shuffle
URL: https://github.com/apache/incubator-druid/pull/8088#discussion_r304182914
 
 

 ##
 File path: 
indexing-service/src/test/java/org/apache/druid/indexing/worker/IntermediaryDataManagerManualAddAndDeleteTest.java
 ##
 @@ -0,0 +1,147 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
+
+package org.apache.druid.indexing.worker;
+
+import com.amazonaws.util.StringUtils;
+import com.google.common.collect.ImmutableList;
+import org.apache.commons.io.FileUtils;
+import org.apache.druid.client.indexing.IndexingServiceClient;
+import org.apache.druid.client.indexing.NoopIndexingServiceClient;
+import org.apache.druid.indexing.common.config.TaskConfig;
+import org.apache.druid.indexing.worker.config.WorkerConfig;
+import org.apache.druid.java.util.common.Intervals;
+import org.apache.druid.segment.loading.StorageLocationConfig;
+import org.apache.druid.timeline.DataSegment;
+import org.apache.druid.timeline.partition.NumberedShardSpec;
+import org.joda.time.Interval;
+import org.junit.After;
+import org.junit.Assert;
+import org.junit.Before;
+import org.junit.Rule;
+import org.junit.Test;
+import org.junit.rules.TemporaryFolder;
+
+import java.io.File;
+import java.io.IOException;
+import java.util.Comparator;
+import java.util.List;
+
+public class IntermediaryDataManagerManualAddAndDeleteTest
+{
+  @Rule
+  public TemporaryFolder tempDir = new TemporaryFolder();
+
+  private IntermediaryDataManager intermediaryDataManager;
+
+  @Before
+  public void setup() throws IOException
+  {
+final WorkerConfig workerConfig = new WorkerConfig();
+final TaskConfig taskConfig = new TaskConfig(
+null,
+null,
+null,
+null,
+null,
+false,
+null,
+null,
+ImmutableList.of(new StorageLocationConfig(tempDir.newFolder(), null, 
null))
+);
+final IndexingServiceClient indexingServiceClient = new 
NoopIndexingServiceClient();
+intermediaryDataManager = new IntermediaryDataManager(workerConfig, 
taskConfig, indexingServiceClient);
+intermediaryDataManager.start();
+  }
+
+  @After
+  public void teardown() throws InterruptedException
+  {
+intermediaryDataManager.stop();
+  }
+
+  @Test
+  public void testAddSegment() throws IOException
 
 Review comment:
   nit: is this test worth having since it is also implicitly tested by the 
other 2 tests?


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