[COOT] line 124: 4123 Segmentation fault

2008-07-02 Thread rebecca page
Dear Coot Community,

I recently installed updates on my linux box which is running fedora core 9.0.

Now, when I try to run coot, I get the following error:

/usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot: line 124:  4123
Segmentation fault  $coot_real $*

Gtk-WARNING **: Failed to load module libgnomebreakpad.so:
libgnomebreakpad.so: cannot open shared object file: No such file or directory
coot-exe: /usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot-real
coot-version: 
/usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot-real
core: #f
No core file found.  No debugging


Can anyone give me an idea of how I can get coot working again. I tried
downloading and installing the latest compiled executable, but I get the
same error.

Thanks for your help,
Rebecca


Re: [COOT] line 124: 4123 Segmentation fault

2008-07-02 Thread Tim Fenn
On Wed, 2 Jul 2008 22:34:04 +0100 rebecca page [EMAIL PROTECTED]
wrote:

 Dear Coot Community,
 
 I recently installed updates on my linux box which is running fedora
 core 9.0.
 
 Now, when I try to run coot, I get the following error:
 
 /usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot: line
 124:  4123 Segmentation fault  $coot_real $*
 
 Gtk-WARNING **: Failed to load module libgnomebreakpad.so:
 libgnomebreakpad.so: cannot open shared object file: No such file or
 directory coot-exe:
 /usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot-real
 coot-version: /usr/local/programs/Coot/coot-Linux-i386-fedora-8/bin/coot-real
 core: #f
 No core file found.  No debugging
 

I think this has to do with a known bug:

https://bugzilla.redhat.com/show_bug.cgi?id=389921

the solution is posted there.

-Tim


Re: [COOT] bond thickness

2008-07-02 Thread Paul Emsley

William Scott wrote:

(set-bond-thickness 0 3)

works

but the menu-driven option for me doesn't anymore.

Bug?


Yes, bug.

The workaround (that works for me) is to activate the default molecule.  
That gets it unstuck.


Paul.