Re: [COOT] crash upon sequence display

2009-06-16 Thread Paul Emsley

Valerie Biou wrote:


I run Coot version 0.6-pre-1 on a Macbook Pro. I used the fink 
installation.
It crashes when I ask it to display a sequence 


 ** (coot-real:764): WARNING **: Widget not found: sequence_view_dialog
/sw/bin/coot: line 5:   764 Bus error   /sw/bin/coot-real "$@"

I must admit that, at least last time this happened, the sequence 
window for this structure was already open somewhere when I asked for 
it a second time. But there are so many windows.. This seems to be 
reproducible. 



Dear Valerie,

Yikes, that was a nasty one.

Thanks for this feedback (and providing the problematic file). It turns 
out that I was using an unsigned int for dealing with residue numbers in 
the sequence view (silly me).  Your pdb had negative residue numbers


(There was also problems dealing with both the new-style and old-style 
sequence views).


Fixed in revision 2062.

Thanks,

Paul.


[COOT] crash upon sequence display

2009-06-16 Thread Valerie Biou

Hello

I run Coot version 0.6-pre-1 on a Macbook Pro. I used the fink  
installation.

It crashes when I ask it to display a sequence

 ** (coot-real:764): WARNING **: Widget not found: sequence_view_dialog
/sw/bin/coot: line 5:   764 Bus error   /sw/bin/coot-real  
"$@"


I must admit that, at least last time this happened, the sequence  
window for this structure was already open somewhere when I asked for  
it a second time. But there are so many windows.. This seems to be  
reproducible.
On the other hand, often recall the display manager window and it  
never crashes the program.

Are you aware of this?
all the best,

Valerie


Valérie Biou   valerie.b...@lebs.cnrs-gif.fr
Laboratoire d'Enzymologie
et Biochimie Structurales
CNRS, avenue de la Terrasse  tel (33/0)1 69 82 34 81
91198 Gif sur Yvettefax (33/0)1 6982 31 29