[COOT] Coot crash on CentOS 7
Hello. I'm trying to get Coot working on Centos 7. Currently trying to use the Scientific Linux 7.6 gtk2-python binaries. At start, I get the splash screen, but then it crashes before the program window appears. Any help is appreciated! Here is the output: ./coot CLIBD_MON not set using COOT_REFMAC_LIB_DIR (coot-bin:13947): GLib-GObject-WARNING **: 11:44:21.607: g_object_set_is_valid_property: object class 'GtkSettings' has no property named 'gtk-application-prefer-dark-theme' There are 143 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/list/mon_lib_list.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ALA.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ASP.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ASN.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/CYS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLN.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLY.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLU.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PHE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/h/HIS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/i/ILE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/l/LYS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/l/LEU.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/m/MET.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/m/MSE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PRO.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ARG.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/s/SER.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/THR.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/v/VAL.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/TRP.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/TYR.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PO4.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/s/SO4.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GOL.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/CIT.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/e/EDO.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/A.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/C.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/G.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/u/U.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DA.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DC.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DG.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DT.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-sci
[COOT] Coot crash on CentOS 7
Hello. I'm attempting to run coot on CentOS 7 using "coot-Linux-x86_64-scientific-linux-7.6-gtk2-python" binaries I'm getting the splash screen, but then coot crashes. I appreciate any help! Here is the output: ./coot CLIBD_MON not set using COOT_REFMAC_LIB_DIR (coot-bin:13947): GLib-GObject-WARNING **: 11:44:21.607: g_object_set_is_valid_property: object class 'GtkSettings' has no property named 'gtk-application-prefer-dark-theme' There are 143 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/list/mon_lib_list.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ALA.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ASP.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ASN.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/CYS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLN.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLY.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GLU.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PHE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/h/HIS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/i/ILE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/l/LYS.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/l/LEU.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/m/MET.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/m/MSE.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PRO.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/ARG.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/s/SER.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/THR.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/v/VAL.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/TRP.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/t/TYR.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/p/PO4.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/s/SO4.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/GOL.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/CIT.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/e/EDO.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/a/A.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/c/C.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/g/G.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/u/U.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DA.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DC.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DG.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data/monomers/d/DT.cif There are 2 data in /root/Downloads/coot-Linux-x86_64-scientific-linux-7.6-gtk2-python/share/coot/lib/data
Re: [COOT] Coot crash on CentOS 7
On Wed, 2021-04-21 at 16:48 +0100, DougB wrote: > Hello. > > I'm attempting to run coot on CentOS 7 using > "coot-Linux-x86_64-scientific-linux-7.6-gtk2-python" binaries > > I'm getting the splash screen, but then coot crashes. I appreciate any help! > It would be better if Coot could exit more elegantly when it can't start the graphics (I've looked into it, but didn't see how). Maybe you are trying to run Coot remotely? If so, this is not a Coot problem, it to do with remote graphics. Try running glxgears - if that works then Coot graphics should work. Regards, Paul. To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
