On 13/08/10 22:47, Alejandro Buschiazzo wrote:
Dear all,

I have this protein with zinc atoms that interact with some atoms from
neighbor molecules related by crystallographic symmetry.
When I add the proper LINK records in the pdb (i.e. including the
corresponding symmetry operators in the sym1 and sym2 fields, right
justified columns 60 - 65&  67 - 72), coot represents these link bonds
between atoms  of the same ASU......the ones linking symmetry-related
atoms become of course 'very long' in some cases...

am I doing something wrong?


No.  Short-sighted-programmer error :)

is there any workaround?

No.  Well, not other than deleting the LINK records.

I'll address it shortly.

Paul.

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