Hi all,
I'm still getting this error on every revision after r5131 - Works fine on
ubuntu, but python scripting fails on my Mac. Does anyone else have this
problem or is it something specific to my machine?
Oliver.
On Sun, 20 Jul 2014 16:54:32 +0100, Oliver Clarke wrote:
>Hello all,
>
>When I updated (via Bill Scott’s stand-alone packages for OS X 10.9) to r5167
>(same is true for r5166), python scripting stopped working, giving a message
>saying that it couldn’t find a coot.py file and that python scripting was
>hence unavailable, followed by errors on all of the python scripts I load at
>startup (all of which worked with r5131, the previous version I had loaded). I
>created a coot.py file but still got the same error. Thoughts? For now I am
>reverting to r5131. A partial sample of the errors occurring at Coot startup
>is appended below.
>
>Also, this seems to be a Mac-specific error - I just upgraded to r5166 on my
>Ubuntu machine and that is working fine.
>
>Many thanks,
>Oliver.
>
>(use-graphics-interface-state)
>DEBUG:: stating pydirectory /Library/Coot/share/coot/python
>WARNING:: No coot.py file found! Python scripting unavailable.
>INFO:: loading preferences file /Users/olibclarke/.coot-preferences/coot.py
>Running python script /Users/olibclarke/.coot-preferences/coot.py
>Traceback (most recent call last):
> File "", line 1, in
> File "/Users/olibclarke/.coot-preferences/coot.py", line 6, in
> set_symmetry_colour(255,35,0)
>NameError: name 'set_symmetry_colour' is not defined
>INFO:: loading preferences file
>/Users/olibclarke/.coot-preferences/coot_preferences.py
>Running python script /Users/olibclarke/.coot-preferences/coot_preferences.py
>Traceback (most recent call last):
> File "", line 1, in
> File "/Users/olibclarke/.coot-preferences/coot_preferences.py", line 6, in
>
> set_file_chooser_selector (1)
>NameError: name 'set_file_chooser_selector' is not defined
>INFO:: loading preferences file
>/Users/olibclarke/.coot-preferences/coot_toolbuttons.py
>Running python script /Users/olibclarke/.coot-preferences/coot_toolbuttons.py
>Traceback (most recent call last):
> File "", line 1, in
> File "/Users/olibclarke/.coot-preferences/coot_toolbuttons.py", line 3, in
>
> coot_toolbar_button("Ligand Builder", "start_ligand_builder_gui()",
> icon_name="go-to-ligand.svg", tooltip="Ligand Builder")
>NameError: name 'coot_toolbar_button' is not defined
>INFO:: loading preferences file
>/Users/olibclarke/.coot-preferences/user_define_restraints.py
>Running python script
>/Users/olibclarke/.coot-preferences/user_define_restraints.py
>Traceback (most recent call last):
> File "", line 1, in
> File "/Users/olibclarke/.coot-preferences/user_define_restraints.py", line
> 410, in
> if (have_coot_python):
>NameError: name 'have_coot_python' is not defined
>(filter-fileselection-filenames-state)
>(get-active-map-drag-flag)
>(use-graphics-interface-state)
>Loading scheme files from /Library/Coot/share/coot/scheme
>load "filter.scm"
>load "matrices.scm"
>load "coot-utils.scm"
>load "redefine-functions.scm"
>load "json-reader.scm"
>load "coot-gui.scm"
>Coot Scheme Scripting GUI code found and loaded.
>load "coot-lsq.scm"
>load "shelx.scm"
>load "get-ebi.scm"
>load "local-code.scm"
>load "hello.scm"
>Good morning Oliver Clarke. Welcome to Coot 0.8-pre (revision 5166) [with
>guile 1.8.8 embedded] [with python 2.7.8 embedded].
>(set-display-intro-string "Good morning Oliver. Welcome to Coot")
>load "mutate.scm"
>load "refmac.scm"
>load "brute-lsqman.scm"
>load "libcheck.scm"
>load "gap.scm"
>load "fitting.scm"
>load "raster3d.scm"
>load "povray.scm"
>load "remote-control.scm"
>load "generic-objects.scm"
>load "fascinating-things.scm"
>load "ncs.scm"
>load "parse-pisa-xml.scm"
>load "cns2coot.scm"
>load "clear-backup.scm"
>load "tips.scm"
>load "prodrg-import.scm"
>load "jligand.scm"
>load "americanisms.scm"
>load "group-settings.scm"
>(set-display-lists-for-maps 0)
>load "tips-gui.scm"
>load "check-for-updates.scm"
>load "jligand-gui.scm"
>load "get-recent-pdbe.scm"
>load "extensions.scm"
>error (not syntax error)
>Traceback (most recent call last):
> File "", line 1, in
>NameError: name 'coot_has_pygtk' is not defined
>error (not syntax error)
>Traceback (most recent call last):
> File "", line 1, in
>NameError: name 'coot_has_pygtk' is not defined
>error (not syntax error)
>Traceback (most recent call last):
> File "", line 1, in
>NameError: name 'coot_has_pygtk' is not defined
>error (not syntax error)
>Traceback (most recent call last):
> File "", line 1, in
>NameError: name 'coot_has_pygtk' is not defined
>error (not syntax error)
>Traceback (most recent call last):
> File "", line 1, in
>NameError: name 'coot_has_pygtk' is not defined
>load "shelx-extensions.scm"
>INFO:: loading preferences file
>/Users/olibclarke/.coot-preferences/coot-preferences.scm
>(set-filter-fileselection-filenames 0)
>(unset-sticky-sort-by-date)
>(set-colour-map-rotation-on-read-pdb 21.00)
>
