[PathwayCommons/factoid] a93761: Bump browserify-sign from 4.0.4 to 4.2.2
Branch: refs/heads/dependabot/npm_and_yarn/browserify-sign-4.2.2 Home: https://github.com/PathwayCommons/factoid Commit: a937610e29538dcc7158d716f0255c809ae0f34e https://github.com/PathwayCommons/factoid/commit/a937610e29538dcc7158d716f0255c809ae0f34e Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M package-lock.json Log Message: --- Bump browserify-sign from 4.0.4 to 4.2.2 Bumps [browserify-sign](https://github.com/crypto-browserify/browserify-sign) from 4.0.4 to 4.2.2. - [Changelog](https://github.com/browserify/browserify-sign/blob/main/CHANGELOG.md) - [Commits](https://github.com/crypto-browserify/browserify-sign/compare/v4.0.4...v4.2.2) --- updated-dependencies: - dependency-name: browserify-sign dependency-type: indirect ... Signed-off-by: dependabot[bot] -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/dependabot/npm_and_yarn/browserify-sign-4.2.2/00-a93761%40github.com.
[cytoscape/cytoscape.js] 4c115c: Document `spacingFactor` for `preset` layout
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 4c115ca16ee6ca1ec2c83da76481602dced77306 https://github.com/cytoscape/cytoscape.js/commit/4c115ca16ee6ca1ec2c83da76481602dced77306 Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/preset.js Log Message: --- Document `spacingFactor` for `preset` layout Ref: Add official support for spacingFactor in the preset layout #3172 Commit: f32bd17d0dca9d27b3c83848d07903909d4000ac https://github.com/cytoscape/cytoscape.js/commit/f32bd17d0dca9d27b3c83848d07903909d4000ac Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/preset.js Log Message: --- Merge pull request #3179 from cytoscape/feature/spacing-factor-preset-3172 Document `spacingFactor` for `preset` layout Compare: https://github.com/cytoscape/cytoscape.js/compare/edd081041078...f32bd17d0dca -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/unstable/edd081-f32bd1%40github.com.
[PathwayCommons/factoid]
Branch: refs/heads/iss1213_import-casing Home: https://github.com/PathwayCommons/factoid -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/iss1213_import-casing/d6bb86-00%40github.com.
[PathwayCommons/factoid] d6bb86: Fix CrossRef module import casing.
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: d6bb869e1f338cfab1883bc10723f5142c1a4b0a https://github.com/PathwayCommons/factoid/commit/d6bb869e1f338cfab1883bc10723f5142c1a4b0a Author: Jeffrey Wong Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/server/routes/api/document/index.js Log Message: --- Fix CrossRef module import casing. Commit: 4517cb3835b4fa1b55211545566c97952a8bbd47 https://github.com/PathwayCommons/factoid/commit/4517cb3835b4fa1b55211545566c97952a8bbd47 Author: Jeffrey Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/server/routes/api/document/index.js Log Message: --- Merge pull request #1214 from PathwayCommons/iss1213_import-casing Fix CrossRef module import casing. Compare: https://github.com/PathwayCommons/factoid/compare/8b6602a8d797...4517cb3835b4 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/unstable/8b6602-4517cb%40github.com.
[PathwayCommons/factoid]
Branch: refs/heads/iss1201_extract-doi-test Home: https://github.com/PathwayCommons/factoid -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/iss1201_extract-doi-test/1764f3-00%40github.com.
[PathwayCommons/factoid]
Branch: refs/heads/iss1201_fill-article-by-id Home: https://github.com/PathwayCommons/factoid -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/iss1201_fill-article-by-id/1b2f40-00%40github.com.
[PathwayCommons/factoid] d6bb86: Fix CrossRef module import casing.
Branch: refs/heads/iss1213_import-casing Home: https://github.com/PathwayCommons/factoid Commit: d6bb869e1f338cfab1883bc10723f5142c1a4b0a https://github.com/PathwayCommons/factoid/commit/d6bb869e1f338cfab1883bc10723f5142c1a4b0a Author: Jeffrey Wong Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/server/routes/api/document/index.js Log Message: --- Fix CrossRef module import casing. -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/iss1213_import-casing/8b6602-d6bb86%40github.com.
[PathwayCommons/factoid]
Branch: refs/heads/iss1213_import-casing Home: https://github.com/PathwayCommons/factoid -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/PathwayCommons/factoid/push/refs/heads/iss1213_import-casing/00-8b6602%40github.com.
[cytoscape/cytoscape.js] dfdf1b: generalize path caching into `getPath` method
Branch: refs/heads/pr/3158/test Home: https://github.com/cytoscape/cytoscape.js Commit: dfdf1b778588a13a347e8f7618ed89e063a58f66 https://github.com/cytoscape/cytoscape.js/commit/dfdf1b778588a13a347e8f7618ed89e063a58f66 Author: Noah Pedrini Date: 2023-08-22 (Tue, 22 Aug 2023) Changed paths: M src/extensions/renderer/canvas/drawing-nodes.js Log Message: --- generalize path caching into `getPath` method Commit: 52862fb1c6230cb252e60e60045b4cfdaa41d0fa https://github.com/cytoscape/cytoscape.js/commit/52862fb1c6230cb252e60e60045b4cfdaa41d0fa Author: Noah Pedrini Date: 2023-08-22 (Tue, 22 Aug 2023) Changed paths: M src/style/properties.js Log Message: --- add outline style props Commit: 39be8125e6a0a8e5e99df72928a881fa11ce2c27 https://github.com/cytoscape/cytoscape.js/commit/39be8125e6a0a8e5e99df72928a881fa11ce2c27 Author: Noah Pedrini Date: 2023-08-22 (Tue, 22 Aug 2023) Changed paths: M src/extensions/renderer/canvas/drawing-nodes.js Log Message: --- update node rendering to draw outlines Commit: 38f58f57162a59e57087e1a304ea6f71a9860e00 https://github.com/cytoscape/cytoscape.js/commit/38f58f57162a59e57087e1a304ea6f71a9860e00 Author: Noah Pedrini Date: 2023-08-22 (Tue, 22 Aug 2023) Changed paths: M src/style/apply.js Log Message: --- update node cache key to include outline styles Commit: 3218d258349e0838a6f3106f1d2282349228c6a7 https://github.com/cytoscape/cytoscape.js/commit/3218d258349e0838a6f3106f1d2282349228c6a7 Author: Noah Pedrini Date: 2023-08-22 (Tue, 22 Aug 2023) Changed paths: M documentation/md/style.md Log Message: --- update docs Commit: ac3b23cc88b4cf3e67404489f11276923590be8a https://github.com/cytoscape/cytoscape.js/commit/ac3b23cc88b4cf3e67404489f11276923590be8a Author: Noah Pedrini Date: 2023-09-11 (Mon, 11 Sep 2023) Changed paths: M documentation/md/style.md M src/extensions/renderer/canvas/drawing-nodes.js M src/style/properties.js Log Message: --- remove `outline-offset` property Commit: ded390e1d0ca968d044c7a5104d923f1239f259b https://github.com/cytoscape/cytoscape.js/commit/ded390e1d0ca968d044c7a5104d923f1239f259b Author: Noah Pedrini Date: 2023-09-12 (Tue, 12 Sep 2023) Changed paths: M documentation/md/style.md M src/extensions/renderer/canvas/drawing-nodes.js M src/style/properties.js Log Message: --- remove support for `double` outline style Commit: f3010889fce146e7ebbd7215f216504b884ce0d0 https://github.com/cytoscape/cytoscape.js/commit/f3010889fce146e7ebbd7215f216504b884ce0d0 Author: Noah Pedrini Date: 2023-09-12 (Tue, 12 Sep 2023) Changed paths: M src/collection/dimensions/bounds.js M src/extensions/renderer/canvas/drawing-nodes.js Log Message: --- simplify outline rendering Commit: ed2c095bdf4df790e9bc51037e72f77b9776b041 https://github.com/cytoscape/cytoscape.js/commit/ed2c095bdf4df790e9bc51037e72f77b9776b041 Author: Noah Pedrini Date: 2023-10-18 (Wed, 18 Oct 2023) Changed paths: M documentation/md/style.md M src/collection/dimensions/bounds.js M src/extensions/renderer/canvas/drawing-nodes.js M src/style/properties.js Log Message: --- draw outlines by expanding polygons Commit: e66b1fee948f2a9211d5743f440e47e9c6ab6a6a https://github.com/cytoscape/cytoscape.js/commit/e66b1fee948f2a9211d5743f440e47e9c6ab6a6a Author: Noah Pedrini Date: 2023-10-19 (Thu, 19 Oct 2023) Changed paths: M src/collection/dimensions/bounds.js M src/extensions/renderer/canvas/drawing-nodes.js Log Message: --- tweak round shape outlines, bounds calc Commit: b752d41da39916ec47315caad0899602c2a26964 https://github.com/cytoscape/cytoscape.js/commit/b752d41da39916ec47315caad0899602c2a26964 Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M debug/init.js Log Message: --- Update debug demo with data for outlines Compare: https://github.com/cytoscape/cytoscape.js/compare/dfdf1b778588%5E...b752d41da399 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/pr/3158/test/00-b752d4%40github.com.
[cytoscape/cytoscape.js] 55b4f3: Merge pull request #3178 from cytoscape/fix/cose-3170
Branch: refs/heads/3.25.x Home: https://github.com/cytoscape/cytoscape.js Commit: 55b4f3a8ada509a9ea8d643d9d3f6f9e5212963b https://github.com/cytoscape/cytoscape.js/commit/55b4f3a8ada509a9ea8d643d9d3f6f9e5212963b Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/cose.js Log Message: --- Merge pull request #3178 from cytoscape/fix/cose-3170 Fixes COSE TypeError by filtering the edges in the passed-in options Cherry-pick to 3.25.x -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/3.25.x/86d0ce-55b4f3%40github.com.
[cytoscape/cytoscape.js] 4c115c: Document `spacingFactor` for `preset` layout
Branch: refs/heads/feature/spacing-factor-preset-3172 Home: https://github.com/cytoscape/cytoscape.js Commit: 4c115ca16ee6ca1ec2c83da76481602dced77306 https://github.com/cytoscape/cytoscape.js/commit/4c115ca16ee6ca1ec2c83da76481602dced77306 Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/preset.js Log Message: --- Document `spacingFactor` for `preset` layout Ref: Add official support for spacingFactor in the preset layout #3172 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/feature/spacing-factor-preset-3172/00-4c115c%40github.com.
[cytoscape/cytoscape.js] 0ed149: Merge pull request #3178 from cytoscape/fix/cose-3170
Branch: refs/heads/master Home: https://github.com/cytoscape/cytoscape.js Commit: 0ed1494fa6045c20b7f823b60ef7cafdabc17b70 https://github.com/cytoscape/cytoscape.js/commit/0ed1494fa6045c20b7f823b60ef7cafdabc17b70 Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/cose.js Log Message: --- Merge pull request #3178 from cytoscape/fix/cose-3170 Fixes COSE TypeError by filtering the edges in the passed-in options -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/master/06da45-0ed149%40github.com.
[cytoscape/cytoscape.js] 19fb17: Fixes COSE TypeError by filtering the edges in the...
Branch: refs/heads/unstable Home: https://github.com/cytoscape/cytoscape.js Commit: 19fb17857005294b45a49e77dcd45d5981d24edf https://github.com/cytoscape/cytoscape.js/commit/19fb17857005294b45a49e77dcd45d5981d24edf Author: Christian Lopes Date: 2023-10-24 (Tue, 24 Oct 2023) Changed paths: M src/extensions/layout/cose.js Log Message: --- Fixes COSE TypeError by filtering the edges in the passed-in options (discards any edge that has a connected node not in the passed-in node collection) -- #3170 Commit: edd081041078815681e77f58df0e2995fc07b7c4 https://github.com/cytoscape/cytoscape.js/commit/edd081041078815681e77f58df0e2995fc07b7c4 Author: Max Franz Date: 2023-10-26 (Thu, 26 Oct 2023) Changed paths: M src/extensions/layout/cose.js Log Message: --- Merge pull request #3178 from cytoscape/fix/cose-3170 Fixes COSE TypeError by filtering the edges in the passed-in options Compare: https://github.com/cytoscape/cytoscape.js/compare/b1751b8253ea...edd081041078 -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/cytoscape-cvs/cytoscape/cytoscape.js/push/refs/heads/unstable/b1751b-edd081%40github.com.
