compile
I already received (with thanks) useful guidelines how to compile but I realize that I have to clear my mind and perhaps also my computer to succeed. __ First what ./configure -linux requests: ---g77 and gcc found and accepted. ---Libraries are tested for existence in this order: libacml.a libmkl.so libmkl_p3.a libatlas.a libblas.a ---Directory search for these libraries: /lib /usr/local/lib /usr/lib /usr/local/lib/ATLAS /lib64 /usr/lib64 usr/local/lib64 (NONE FOUND BY CONFIGURE) ---Parallelization (I know that mpich is needed) This is a computational software mainly used on aix cray sgi sun, therefore the generic -linux; however, configure understands that my machine is parallel and that linux is installed, if the optional -linux is not given) My system: amd64 debian etch /lib (only 64bit) lib64 - /lib media mnt opt proc root sbin srv sys tmp usr var vmlinuz - boot/vmlinuz-2.6.15-1-amd64-k8-smp Examining # aptitude for what I guessed to be related to the problrem base main: linux-image-2.6.amd64-k8-smp linux-image-2.6.15-1-amd64-k8-smp devel main (are there packages to remove, not indicated by aptitude in the section Obsolete?: atlas3-headers 3.6.0-20.2 binutils 2.16.1cvs2 bison debconf-utils g++-41 4.1.0-4 g77 4:3.4.6-4 A g77-3.4 3.4.6-1 A gcc 4:4.0.3-4 A gcc-3.4 3.4.6-1 A gcc-3.4-base 3.4.6-1 gcc-4.0-base 4.0.3-3 gcc-4.1 4.1.0-4 gcc-4.1-base 4.1.0-4 gbd 6.4.90dfs linuxkernel-headers 2.6.13+0rc make 3.81.-2 mpich-shmem-bin 1.2.7-1 interpreters main: cpp 4:4.0.3-4 A cpp-3.4 3.4.6-1 cpp-4.0 4.0.3-3 cpp-4.1 4.1.0-4 m4 1.4.4-1 libdevel main: libc6-dev 2.3.6-15 A libg2c0-dev libmudflap0-dev libstdc++6-4-dev libs main: NO ONE OF NAME RELATED TO THOSE SEARCHED BY CONFIGURE mish main: debian-archive keyring 2006.01.18 installation report A libgtk2.0-bin ___ I understand that I have to install the requested mathematical libraries from http://math-atlas.sourceforge.net/ http://www.netlib.org/blas/ OK? At any event, because of my inexperience with such affairs (and this should be a good lesson for the future) I do not understand what actually to download and install in relation to the request of libraries by configure. mpich should be in order for shared-memory local usage. I realize I am asking much. Profound thanks francesco pietra -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Re: compile
Francesco Pietra wrote: I already received (with thanks) useful guidelines how to compile but I realize that I have to clear my mind and perhaps also my computer to succeed. __ First what ./configure -linux requests: ---g77 and gcc found and accepted. ---Libraries are tested for existence in this order: libacml.a libmkl.so libmkl_p3.a libatlas.a libblas.a libacml.a is the AMD Core Maths Library, a proprietary maths library optimised for AMD opteron. libmkl.so and libmkl_p3.so are the Intel Math Kernel Library - see above, but read Intel instead of AMD libatlas.a is from the atlas3-base-dev package libblas.a is from the atlas3-base-dev or refblas3-dev packages (for the Atlas version, your directory search must include /use/lib/atlas/) As per usual, there is no reason to download any tarballs and break package management, unless you want to use one of the proprietary versions. -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Re: compile
On Wednesday 28 June 2006 11:09, Jo Shields wrote: Francesco Pietra wrote: I already received (with thanks) useful guidelines how to compile but I realize that I have to clear my mind and perhaps also my computer to succeed. __ First what ./configure -linux requests: ---g77 and gcc found and accepted. ---Libraries are tested for existence in this order: libacml.a libmkl.so libmkl_p3.a libatlas.a libblas.a libacml.a is the AMD Core Maths Library, a proprietary maths library optimised for AMD opteron. libmkl.so and libmkl_p3.so are the Intel Math Kernel Library - see above, but read Intel instead of AMD libatlas.a is from the atlas3-base-dev package #aptitude install atlas3-base-dev whereis libatlas.a /usr/lib/libatlas.a /usr/lib/libatlas.so whereis libblas.a libblas.a: therefore, see below libblas.a is from the atlas3-base-dev or refblas3-dev packages #aptitude install refblas3-dev whereis libblas.a /usr/lib/libblas.so /usr/lib/libblas.a (for the Atlas version, your directory search must include /use/lib/atlas/) do you mean that, as now located, these libraries are not seen by configure searching: ---Libraries are tested for existence in this order: libacml.a libmkl.so libmkl_p3.a libatlas.a libblas.a ? and that I should do something else? Apart from this, I was confused by, a couple of days ago: #apt-file update #apt-file search libatlas.a atlas3-base-dev while, after having installed atlas3-headers and mpich-shmem-bin, the above search command returns nothing (the same for libblas.a), and therefore my question that I had already posed. Even now after having installed the above packages. As per usual, there is no reason to download any tarballs and break package management, unless you want to use one of the proprietary versions. Because apt-file search does not work in my hands (although apt-file is installed (as from #aptitude in admin main), I can not verify whether the last lacking piece of the cacke (libacml.a) is available from Debian. Perusal on internet (http://seldon.it.northwestern.edu/sscc/acmldoc/Linking_002fLinux.html) seems to indicated that the Linux 64-bit g77 version of ACML should be installed in the default directory, /opt/acml3.1.0/gnu64. Very likely I misunderstang but, anyway, I have installed g77 from Debian. Thanks for this clarification. francesco pietra -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Re: Re: running vncserver?
Hi It seems that the host you named doesn't accept any reuests Is there another way to retrieve the .debs? With kind regards Robert -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
gnome difficulties
A few days ago the gnome panel and nautilus lost significant functionality. I'm running AMD64 debian. When I log in, the gnome pane appears, but does not become populated with icons. It blinks several times and then I get a variety of similar behaviors. Either: 1. I get a message the nautilus has died and the gnome-panel has died 2. I get a message the the gnome-settings-daemon has tried to start too many times After I click close on each of the buttons, the panel does become populated with icons, but I have no control over the theme. I have started filing a bug report with gnome, but the behavior on crash is complicated enough that I have had to start over a couple of times. I'm wondering whether Debian plays a role. Art Edwards -- Arthur H. Edwards Senior Research Physicist Air Force Research Laboratory AFRL/VSSE Bldg. 914 3550 Aberdeen Ave. SE KAFB, NM 87117-5776 (505) 853-6042 (O) (505) 463-6722 (C) (505) 846-2290 (F) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
xmgrace partly broken under debian
I'm running amd64 debian. Xmgrace does not allow me to enter text in the Filter area of the Read sets window. This is true under both KDE and gnome. Because I have not updated xmgrace in a very long time, and because it has been working well for as long as I have had it (many years), this seems to be a Debian issue. Art Edwards -- Arthur H. Edwards Senior Research Physicist Air Force Research Laboratory AFRL/VSSE Bldg. 914 3550 Aberdeen Ave. SE KAFB, NM 87117-5776 (505) 853-6042 (O) (505) 463-6722 (C) (505) 846-2290 (F) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Re: xmgrace partly broken under debian
Thanks for the response. Here is the output of the command ldd /usr/X11R6/bin/xmgrace libXmHTML.so.1 = /usr/lib/libXmHTML.so.1 (0x2ada3731d000) libXm.so.2 = /usr/lib/libXm.so.2 (0x2ada374b2000) libXpm.so.4 = /usr/lib/libXpm.so.4 (0x2ada3773b000) libXp.so.6 = /usr/lib/libXp.so.6 (0x2ada37851000) libXt.so.6 = /usr/lib/libXt.so.6 (0x2ada37959000) libXext.so.6 = /usr/lib/libXext.so.6 (0x2ada37abb000) libX11.so.6 = /usr/lib/libX11.so.6 (0x2ada37bcc000) libSM.so.6 = /usr/lib/libSM.so.6 (0x2ada37da9000) libICE.so.6 = /usr/lib/libICE.so.6 (0x2ada37eb4000) libnetcdf.so.3 = /usr/lib/libnetcdf.so.3 (0x2ada37fcf000) libfftw.so.2 = /usr/lib/libfftw.so.2 (0x2ada3810a000) libt1.so.5 = /usr/lib/libt1.so.5 (0x2ada38244000) libjpeg.so.62 = /usr/lib/libjpeg.so.62 (0x2ada3839f000) libpng12.so.0 = /usr/lib/libpng12.so.0 (0x2ada384c1000) libz.so.1 = /usr/lib/libz.so.1 (0x2ada385e6000) libm.so.6 = /lib/libm.so.6 (0x2ada386fc000) libdl.so.2 = /lib/libdl.so.2 (0x2ada38882000) libc.so.6 = /lib/libc.so.6 (0x2ada38986000) libXft.so.2 = /usr/lib/libXft.so.2 (0x2ada38bc5000) libXrender.so.1 = /usr/lib/libXrender.so.1 (0x2ada38cd9000) libXau.so.6 = /usr/lib/libXau.so.6 (0x2ada38de3000) libXdmcp.so.6 = /usr/lib/libXdmcp.so.6 (0x2ada38ee5000) /lib64/ld-linux-x86-64.so.2 (0x2ada37205000) libfontconfig.so.1 = /usr/lib/libfontconfig.so.1 (0x2ada38feb000) libfreetype.so.6 = /usr/lib/libfreetype.so.6 (0x2ada3912b000) libexpat.so.1 = /usr/lib/libexpat.so.1 (0x2ada392a5000) Jaime Ochoa Malagón wrote: ldd xmgrace could be a library lost... On 6/28/06, *edwardsa* [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] wrote: I'm running amd64 debian. Xmgrace does not allow me to enter text in the Filter area of the Read sets window. This is true under both KDE and gnome. Because I have not updated xmgrace in a very long time, and because it has been working well for as long as I have had it (many years), this seems to be a Debian issue. Art Edwards -- Arthur H. Edwards Senior Research Physicist Air Force Research Laboratory AFRL/VSSE Bldg. 914 3550 Aberdeen Ave. SE KAFB, NM 87117-5776 (505) 853-6042 (O) (505) 463-6722 (C) (505) 846-2290 (F) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] -- Engañarse por amor es el engaño más terrible; es una pérdida eterna para la que no hay compensación ni en el tiempo ni en la eternidad. Kierkegaard Jaime Ochoa Malagón Integrated Technology Tel: (55) 52 54 26 10 -- Arthur H. Edwards Senior Research Physicist Air Force Research Laboratory AFRL/VSSE Bldg. 914 3550 Aberdeen Ave. SE KAFB, NM 87117-5776 (505) 853-6042 (O) (505) 463-6722 (C) (505) 846-2290 (F) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Re: Server REALLY slow after console messages
Kernel 2.6.8-12-em64t-p4-smp On 6/28/06, Hemlock [EMAIL PROTECTED] wrote: On Wed, 28 Jun 2006 09:07:02 +1200, Simon wrote Hi There, Can anyone have a look at this screenshot and give me a glimmer of what is going on here? This server is responding to pings, but all services are 'stuck', i can login, but it times out after 60 seconds and typing is REALLY slow... http://gremin.orcon.net.nz/mx.JPG Thanks for any input Running a 2.6.15 kernel? -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED] -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
python2.4 insanity
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Greetings all, I attempted to update my HP Pavilion zv6000 series laptop (amd64) running sid (unstable all the way!). I get a really strange error with python2.4; it won't install and it won't remove (argh!). x-x-x-x begin error message x-x-x-x Preconfiguring packages ... dpkg: error processing python2.r (--remove) Package is in a very bad inconsistent state - you should reinstall it before attempting a removal. terminate called after throwing an instance of 'std::logic_error' what(): basic_string::_S_construct NULL not valid /usr/lib/dpkg/methods/apt/install: line 57: 10158 Aborted\\ $APTGET $OPTS $APT_OPT0 $APT_OPT1 dselect-upgrade Some errors occurred ... (etc. etc.) x-x-x-x end error message x-x-x-x I don't have a clue. - -- Fielder George Dowding, Chief Iceworm.^. Debian/GNU Linux dba Iceworm Enterprises, Anchorage, Alaska /v\ etch Testing Since 1976 - Over 30 Years of Service. /( )\ User Number 269482 ^^-^^ irad 301256 -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.3 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org iD8DBQFEowdK2kl99FX0AIkRAt9QAJ0T0idCorfx9X+W9W92Hhuq2nZoKQCfTNgA TIp6dPMRus24B5Z21HmMH2M= =md2D -END PGP SIGNATURE- -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
dselect wants to remove stuff that I don't want it to remove!
Help. I ran deselect and used SELECT to set ssh to install and when I selected INSTALL it told me that it wanted to REMOVE several packages that I need and did not want to uninstall. When I canceled the INSTALL and went back to SELECT to look at the packages it said it was going to remove they were labeled as ***, three stars like: Don't remove What's going on here? Anyone know? Thanks, -Greg
