Bug#968075: ITP: iminuit -- Robust Python minimisation library based around MINUIT2
Package: wnpp Severity: wishlist Owner: Jeremy Sanders * Package name: iminuit Version : 1.4.2 Upstream Author : Piti Ongmongkolkul * URL : https://github.com/scikit-hep/iminuit * License : MIT Programming Lang: C++, Python Description : Robust Python minimisation library based around MINUIT2 iminuit is a Jupyter-friendly Python frontend to the MINUIT2 C++ library. It can be used as a general robust function minimisation method, but is most commonly used for likelihood fits of models to data, and to get model parameter error estimates from likelihood profile analysis. Further comments - Optional dependency for veusz debian package - One of the most robust and easy to use numerical minimisation packages for Python - Based around MINUIT2, which is a rewrite of the very widely used and well-tested MINUIT minimisation package, developed since the 1970s - Other packages which provide similar minimisers are scipy. A comparison of its performance is here: https://iminuit.readthedocs.io/en/stable/benchmark.html - Would prefer to maintain it within the Debian Science Team - I would need a sponsor to get it included
Bug#945467: Fix available (fwd)
Hi Andreas Do you have time to look at this again? Sorry to bother you. Thanks Jeremy PS Veusz plots timeseries data (referring to your question on the mailing list). On 16/05/2020 21:23, Andreas Tille wrote: Hi Jeremy, please make sure to inject pristine-tar (according to Debian Science policy). I did so now. Unfortunately the package does not build in a pbuilder chroot: ... dh_sip3 make[1]: Leaving directory '/build/veusz-3.2.1' dh_install -O--buildsystem=pybuild dh_install: warning: Cannot find (any matches for) "usr/lib/python3*/*-packages/veusz/helpers/*.cpython-[0-9]*[!d]m-*.so" (tried in ., debian/tmp) dh_install: warning: python3-veusz.helpers missing files: usr/lib/python3*/*-packages/veusz/helpers/*.cpython-[0-9]*[!d]m-*.so dh_install: error: missing files, aborting make: *** [debian/rules:23: binary] Error 25 ... Kind regards Andreas. On Sat, May 16, 2020 at 03:05:10PM +0300, Adrian Bunk wrote: Andreas, could you sponssor that one? You already sponsored the latest 2 uploads of this package. Thanks Adrian - Forwarded message from Jeremy Sanders - Date: Fri, 17 Apr 2020 09:10:00 +0200 From: Jeremy Sanders To: 945...@bugs.debian.org Subject: Bug#945467: Fix available Resent-From: Jeremy Sanders Resent-To: debian-bugs-dist@lists.debian.org Resent-Date: Fri, 17 Apr 2020 07:21:01 + I've updated the version control to have the latest version of Veusz, 3.2.1, which should fix this bug: https://salsa.debian.org/science-team/veusz It would be great if a developer with permissions could have a look and consider uploading it. Thanks Jeremy - End forwarded message -
Bug#945467: Fix available (fwd)
Hi Andreas Thanks very much for looking at this. I forgot to update my build environment and something has changed in the extension module naming since then. I'm sorry about that. I've put in a fix to the repo, and checked it builds in pbuilder on an up to date sid. Thanks again Jeremy On 16/05/2020 21:23, Andreas Tille wrote: Hi Jeremy, please make sure to inject pristine-tar (according to Debian Science policy). I did so now. Unfortunately the package does not build in a pbuilder chroot: ... dh_sip3 make[1]: Leaving directory '/build/veusz-3.2.1' dh_install -O--buildsystem=pybuild dh_install: warning: Cannot find (any matches for) "usr/lib/python3*/*-packages/veusz/helpers/*.cpython-[0-9]*[!d]m-*.so" (tried in ., debian/tmp) dh_install: warning: python3-veusz.helpers missing files: usr/lib/python3*/*-packages/veusz/helpers/*.cpython-[0-9]*[!d]m-*.so dh_install: error: missing files, aborting make: *** [debian/rules:23: binary] Error 25 ... Kind regards Andreas. On Sat, May 16, 2020 at 03:05:10PM +0300, Adrian Bunk wrote: Andreas, could you sponssor that one? You already sponsored the latest 2 uploads of this package. Thanks Adrian - Forwarded message from Jeremy Sanders - Date: Fri, 17 Apr 2020 09:10:00 +0200 From: Jeremy Sanders To: 945...@bugs.debian.org Subject: Bug#945467: Fix available Resent-From: Jeremy Sanders Resent-To: debian-bugs-dist@lists.debian.org Resent-Date: Fri, 17 Apr 2020 07:21:01 + I've updated the version control to have the latest version of Veusz, 3.2.1, which should fix this bug: https://salsa.debian.org/science-team/veusz It would be great if a developer with permissions could have a look and consider uploading it. Thanks Jeremy - End forwarded message -
Bug#945467: Fix available
I've updated the version control to have the latest version of Veusz, 3.2.1, which should fix this bug: https://salsa.debian.org/science-team/veusz It would be great if a developer with permissions could have a look and consider uploading it. Thanks Jeremy
Bug#714891: Still problems with 1.20.1-2
I though 1.20.1-2 (in unstable) should fix this bug, but on upgrading from wheezy to sid, I get: root@lap75107:/# apt-get upgrade ... Preparing to unpack .../veusz_1.20.1-2_all.deb ... Unpacking veusz (1.20.1-2) over (1.15-1) ... dpkg: error processing archive /var/cache/apt/archives/veusz_1.20.1-2_all.deb (--unpack): trying to overwrite '/usr/lib/python2.7/dist-packages/veusz/resources', which is also in package veusz-helpers 1.15-1+b1 dpkg: considering deconfiguration of veusz, which would be broken by installation of veusz-helpers ... dpkg: yes, will deconfigure veusz (broken by veusz-helpers) Preparing to unpack .../veusz-helpers_1.20.1-2_amd64.deb ... De-configuring veusz (1.15-1) ... Unpacking veusz-helpers (1.20.1-2) over (1.15-1+b1) ... root@lap75107:/# apt-get dist-upgrade Reading package lists... Done Building dependency tree Reading state information... Done You might want to run 'apt-get -f install' to correct these. The following packages have unmet dependencies: veusz-helpers : Breaks: veusz ( 1.20.1-2) but 1.15-1 is installed E: Unmet dependencies. Try using -f. Any idea how to get this to cleanly upgrade? -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#721891: crash in tutorial
Thanks for reporting the bug. I'm upstream and I don't think this bug is fixed in the latest version. I have been unable to reproduce this bug, so if you can tell me how to reproduce it exactly, that would be very helpful. Others have reported this bug directly. However, I agree that the current debian version is very old and out of date. Updating this would fix a number of other bugs and bring in new features. Jeremy -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#714891: veusz-helpers: fails to upgrade from wheezy - trying to overwrite /usr/lib/python2.7/dist-packages/veusz/resources
Thanks for the report. I think the error occurs because there are resource symlinks in both the veusz and veusz-helpers packages. /usr/lib/python2.7/dist-packages/veusz/resources Unfortunately, I don't know why the resources symlink is in veusz-helpers (rather than just in veusz). veusz-helpers.install from the packaging just contains usr/lib/python*/*-packages/veusz/helpers/*[!_][!_].so so there should only be shareables in that package. If I build the latest veusz (1.18) from the PAPT repository, there is no resources link in veusz-helpers. I don't think any changes have been made to the packaging in this respect. I can only link that there has been a bug in debhelper which has been fixed. Jeremy Sanders -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#654604: Bug #654604
I've worked as upstream with an ARM qemu virtual machine to fix this problem. There's no yet fixed release of the program, however, and probably won't be for at least several weeks or so. The patches which fix the issue are very large, as the self test comparison output needed changing to account for floating point variations. As the test failures aren't indicating any real problems, I think the best solution is to just disable the failing tests until the next upstream release. I've put in a temporary patch to do this. So hopefully, this will be fixed if we push the current HEAD of the PAPT repository. Jeremy -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#654604: debugging
I'm upstream and also help do the debian packaging. I suspect it didn't fail in the previous release because we didn't run the test suite. The Veusz test suite basically just compares a set of generated SVG-like output with expected output. It's possible these are floating point rounding error problems under ARM leading to differences. They could be a real bugs, however. Is it possible to get access to the *.temp.selftest files in the tests source directory after the failed build, or is there a virtual machine somewhere I can debug under? These can be diffed against the .selftest files under tests/comparison/ Thanks Jeremy -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#447524: Submitted to PAPT
I've submitted a package for Veusz (1.9) to the PAPT (Python Applications Packaging Team). It has been added to the PAPT svn repository. ViewVC view of debian files here: http://svn.debian.org/viewsvn/python-apps/packages/veusz/trunk/ Awaiting sponsorship. -- Jeremy Sanders jer...@jeremysanders.net http://www.jeremysanders.net/Cambridge, UK -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#595941: lintian: False positive: extra-license-file
Package: lintian Version: 2.4.3 Severity: normal linitan reports a false positive for extra-license-file for a package containing a Qt user interface file (.ui extension) called license.ui. See here for the file itself: http://svn.gna.org/viewcvs/*checkout*/veusz/trunk/dialogs/license.ui It is the source for a dialog box to bring up the license, not a license itself. -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.32-5-486 Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages lintian depends on: ii binutils 2.20.1-12 The GNU assembler, linker and bina ii diffstat 1.53-1produces graph of changes introduc ii dpkg-dev 1.15.8.4 Debian package development tools ii file 5.04-5Determines file type using magic ii gettext0.18.1.1-1GNU Internationalization utilities ii intltool-debian0.35.0+20060710.1 Help i18n of RFC822 compliant conf ii libapt-pkg-perl0.1.24+b1 Perl interface to libapt-pkg ii libclass-accessor-perl 0.34-1Perl module that automatically gen ii libipc-run-perl0.89-1Perl module for running processes ii libparse-debianchangel 1.1.1-2.1 parse Debian changelogs and output ii libtimedate-perl 1.2000-1 collection of modules to manipulat ii liburi-perl1.54-1module to manipulate and access UR ii locales2.11.2-2 Embedded GNU C Library: National L ii man-db 2.5.7-4 on-line manual pager ii perl [libdigest-sha-pe 5.10.1-14 Larry Wall's Practical Extraction lintian recommends no packages. Versions of packages lintian suggests: pn binutils-multiarchnone (no description available) pn libtext-template-perl none (no description available) ii man-db2.5.7-4on-line manual pager -- no debconf information -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#447524: Ubuntu package
I've made an Ubuntu package which is awaiting feedback and (perhaps) acceptance. Maybe it could also be submitted to Debian, though I haven't read through the guidelines for this. See http://revu.ubuntuwire.com/details.py?package=veusz and https://bugs.launchpad.net/ubuntu/+bug/312112 Jeremy -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
