Bug#711943: transition: openmpi
On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: transition Hello, I would like to propose the transition of openmpi from version 1.4 = 1.6. The ABI has changed between the two releases. However, the MPI ABI being stable, binNMU should be enough most of (all?) the time. Version 1.6.4+-1~exp1 is available in experimental. Last blocker for calling this done is valgrind-mpi/armel. Cheers, Julien signature.asc Description: Digital signature
Bug#711943: transition: openmpi
On Thu, Aug 15, 2013 at 09:56:07 +0200, Sylvestre Ledru wrote: On 13/08/2013 10:44, Julien Cristau wrote: Control: tag -1 confirmed On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: I would like to propose the transition of openmpi from version 1.4 = 1.6. Please go ahead. Excellent! It has just been uploaded! It doesn't seem to work on ia64, causing a number of build failures. Is there a way this can be resolved quickly? Cheers, Julien signature.asc Description: Digital signature
Bug#711943: transition: openmpi
On 07/09/2013 10:34, Julien Cristau wrote: It doesn't seem to work on ia64, causing a number of build failures. Is there a way this can be resolved quickly? I just check with a rebuild of openmpi on a ia64 porterbox and all upstream unitary tests are working ... (they don't have much). Currently, package builds seem to freeze when displaying this warning: -- A deprecated MCA parameter value was specified in the environment or on the command line. Deprecated MCA parameters should be avoided; they may disappear in future releases. Deprecated parameter: plm_rsh_agent -- Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#711943: transition: openmpi
On Sat, Aug 17, 2013 at 18:37:28 +0200, Andreas Beckmann wrote: Sylvestre originally suggested is_affected = .depends ~ libopenmpi1.3 | .depends ~ libopenmpi1.6; That's what reportbug generates, iirc, which I don't like. Cheers, Julien signature.asc Description: Digital signature
Bug#711943: transition: openmpi
Hi, the ben file for the openmpi transition lists too few affected packages: Affected: .build-depends ~ /libopenmpi/ does not catch packages that Build-Depends: mpi-default-dev, but there could be even more ways to get an indirect B-D: libopenmpi-dev. Sylvestre originally suggested is_affected = .depends ~ libopenmpi1.3 | .depends ~ libopenmpi1.6; Andreas -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#711943: transition: openmpi
On 13/08/2013 10:44, Julien Cristau wrote: Control: tag -1 confirmed On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: I would like to propose the transition of openmpi from version 1.4 = 1.6. Please go ahead. Excellent! It has just been uploaded! Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#711943: transition: openmpi
Control: tag -1 confirmed On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: I would like to propose the transition of openmpi from version 1.4 = 1.6. Please go ahead. Cheers, Julien signature.asc Description: Digital signature
Bug#711943: transition: openmpi
On 11/07/2013 00:28, Julien Cristau wrote: On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: transition Hello, I would like to propose the transition of openmpi from version 1.4 = 1.6. The ABI has changed between the two releases. However, the MPI ABI being stable, binNMU should be enough most of (all?) the time. Version 1.6.4+-1~exp1 is available in experimental. The package in experimental seems to build on fewer archs than 1.4. Mostly because it build-depends on linux-only infiniband stuff. Is that optional? If so can you change that build-dep in experimental? Right. Thanks. I fixed that in 1.6.5-1~exp2 and uploaded it. Sylvestre signature.asc Description: OpenPGP digital signature
Bug#711943: transition: openmpi
On Tue, Jun 11, 2013 at 12:14:25 +0200, Sylvestre Ledru wrote: Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: transition Hello, I would like to propose the transition of openmpi from version 1.4 = 1.6. The ABI has changed between the two releases. However, the MPI ABI being stable, binNMU should be enough most of (all?) the time. Version 1.6.4+-1~exp1 is available in experimental. The package in experimental seems to build on fewer archs than 1.4. Mostly because it build-depends on linux-only infiniband stuff. Is that optional? If so can you change that build-dep in experimental? Thanks, Julien signature.asc Description: Digital signature
Bug#711943: transition: openmpi
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: transition Hello, I would like to propose the transition of openmpi from version 1.4 = 1.6. The ABI has changed between the two releases. However, the MPI ABI being stable, binNMU should be enough most of (all?) the time. Version 1.6.4+-1~exp1 is available in experimental. Ben file: title = openmpi; is_affected = .depends ~ libopenmpi1.3 | .depends ~ libopenmpi1.6; is_good = .depends ~ libopenmpi1.6; is_bad = .depends ~ libopenmpi1.3; The list of packages depending on libopenmpi1.3 is pretty long: $ apt-rdepends -r libopenmpi1.3 Reverse Depends: abyss (1.3.4-3) Reverse Depends: aces3 (3.0.6-7) Reverse Depends: ampliconnoise (1.25-1) Reverse Depends: apbs (1.3.0-2) Reverse Depends: blacs-mpi-test (1.1-31) Reverse Depends: clustalw-mpi (0.15-2) Reverse Depends: code-saturne-bin (3.0.1-1) Reverse Depends: coinor-libipopt1 (3.10.2-1.1) Reverse Depends: coop-computing-tools (3.5.1-2) Reverse Depends: cp2k (2.2.426-8) Reverse Depends: esys-particle (2.2.u1-2) Reverse Depends: feel++-apps (0.91.4-3) Reverse Depends: fftw2 (2.1.5-1) Reverse Depends: freefem++ (3.19.1-1) Reverse Depends: gerris-mpi (20110329-dfsg.2-1) Reverse Depends: getdp (2.2.0-1) Reverse Depends: ghemical (3.0.0-1) Reverse Depends: gmsh (2.7.0.dfsg-1) Reverse Depends: gpiv-mpi (0.6.1-2) Reverse Depends: gpivtools-mpi (0.6.0-3) Reverse Depends: gromacs-openmpi (4.5.5-2) Reverse Depends: hpcc (1.4.1-2) Reverse Depends: lammps (0~20130503.gitd2adfba-1) Reverse Depends: libadios-dev (1.3-11) Reverse Depends: libblacs-mpi1 (1.1-31) Reverse Depends: libboost-graph-parallel1.49.0 (1.49.0-4) Reverse Depends: libboost-graph-parallel1.53.0 (1.53.0-5) Reverse Depends: libboost-mpi-python1.49.0 (1.49.0-4) Reverse Depends: libboost-mpi-python1.53.0 (1.53.0-5) Reverse Depends: libboost-mpi1.49.0 (1.49.0-4) Reverse Depends: libboost-mpi1.53.0 (1.53.0-5) Reverse Depends: libcdi0 (1.5.4+dfsg.1-5) Reverse Depends: libdolfin1.0 (1.0.0-7+b1) Reverse Depends: libdune-grid-2.2.1 (2.2.1-2) Reverse Depends: libfeel++1 (0.91.4-3) Reverse Depends: libfftw3-mpi3 (3.3.3-5) Reverse Depends: libfreefem++ (3.19.1-1) Reverse Depends: libfreefoam1 (0.1.0+dfsg-1) Reverse Depends: libgfs-mpi-1.3-2 (20110329-dfsg.2-1) Reverse Depends: libghemical5 (3.0.0-2) Reverse Depends: libgmsh2 (2.7.0.dfsg-1) Reverse Depends: libgpiv-mpi3 (0.6.1-4) Reverse Depends: libhdf5-openmpi-7 (1.8.8-9.1) Reverse Depends: libhypre-2.8.0b (2.8.0b-1) Reverse Depends: libliggghts2 (2.3.2-1) Reverse Depends: libmed-tools (3.0.3-3) Reverse Depends: libmed1 (3.0.3-3) Reverse Depends: libmedc1 (3.0.3-3) Reverse Depends: libmeep-mpi-default6 (1.1.1-9+b1) Reverse Depends: libmeep-openmpi6 (1.1.1-8+b1) Reverse Depends: libmesh0.7.1 (0.7.1-2+b1) Reverse Depends: libmrmpi1 (1.0~20110620.dfsg-2) Reverse Depends: libmumps-4.10.0 (4.10.0.dfsg-3) Reverse Depends: libmumps-ptscotch-4.10.0 (4.10.0.dfsg-3) Reverse Depends: libmusic1 (1.0.7-1.2) Reverse Depends: libns3-3 (3.17+dfsg-1) Reverse Depends: liboasis3-0d (3.3.beta.dfsg.1-8+b1) Reverse Depends: libopenmpi-dbg (= 1.4.5-1) Reverse Depends: libopenmpi-dev (= 1.4.5-1) Reverse Depends: libparmetis3.1 (3.1.1-4) Reverse Depends: libpetsc3.2 (3.2.dfsg-6) Reverse Depends: libptscotch-5.1 (5.1.12b.dfsg-2) Reverse Depends: librheolef1 (6.1-2.1) Reverse Depends: libsc-dev (2.3.1-14) Reverse Depends: libsc7 (2.3.1-14) Reverse Depends: libscalapack-mpi1 (1.8.0-9) Reverse Depends: libscotch-5.1 (5.1.12b.dfsg-2) Reverse Depends: libsiloh5-0 (4.8-13) Reverse Depends: libslepc3.2 (3.2-p5-1) Reverse Depends: libspooles2.2 (2.2-9) Reverse Depends: libvtk5.10 (5.10.1-1) Reverse Depends: libvtk5.8 (5.8.0-13+b1) Reverse Depends: libxdmf2 (2.1.dfsg.1-5) Reverse Depends: liggghts (2.3.2-1) Reverse Depends: meep-mpi-default (1.1.1-9+b1) Reverse Depends: meep-openmpi (1.1.1-8+b1) Reverse Depends: mpb-mpi (1.4.2-18) Reverse Depends: mpqc (2.3.1-14) Reverse Depends: mpqc-support (2.3.1-14) Reverse Depends: mrbayes-mpi (3.2.1+dfsg-2) Reverse Depends: mumps-test (4.10.0.dfsg-3) Reverse Depends: music-bin (1.0.7-1.2) Reverse Depends: netpipe-openmpi (3.7.2-7) Reverse Depends: ns3 (3.17+dfsg-1) Reverse Depends: nwchem (6.1-6) Reverse Depends: oasis3 (3.3.beta.dfsg.1-8+b1) Reverse Depends: oasis3-examples (3.3.beta.dfsg.1-8+b1) Reverse Depends: octave-openmpi-ext (1.1.0-1) Reverse Depends: openmpi-bin (1.4.5-1) Reverse Depends: openmpi-checkpoint (1.4.5-1) Reverse Depends: openmpipython (2.9.2-4) Reverse Depends: otf-trace (1.10.2+dfsg-2) Reverse Depends: paraview (4.0.0~rc1-1) Reverse Depends: paraview-medreader (6.5.0-3) Reverse Depends: parmetis-test (3.1.1-4) Reverse Depends: prime-phylo (1.0.11-1) Reverse Depends: ptscotch (5.1.12b.dfsg-2) Reverse Depends: python-gmsh (2.7.0.dfsg-1) Reverse
