Bug#727693: [Debian-med-packaging] Bug#727693: autopkgtest fails: there is no package called ‘statmod’
Le Fri, Oct 25, 2013 at 03:30:37PM +0200, Martin Pitt a écrit :
apt-cache search statmod does not give anything. Is that a missing
dependency or some missing configuration? Also, could the autopkgtest
perhaps do something like R [...] || { cat logfile; exit 1 } to
make the test fail usefully?
Hi Martin,
sorry for the headaches. I did not try the test in a minimal environment and
did not realise that it requires modules that are not packaged in Debian but
were present on my computer. The next update of r-bioc-limma and r-bioc-edger
will disable them.
Thanks as well for the suggestion on how to make the failure more useful.
Cheers,
--
Charles Plessy
Debian Med packaging team,
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan
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Bug#727693: [Debian-med-packaging] Bug#727693: autopkgtest fails: there is no package called ‘statmod’
Hey Charles, Charles Plessy [2013-10-28 21:55 +0900]: sorry for the headaches. I did not try the test in a minimal environment and did not realise that it requires modules that are not packaged in Debian but were present on my computer. The next update of r-bioc-limma and r-bioc-edger will disable them. Ah thanks, good to know. So I won't waste more time trying to get it running. That's precisely the/one kind of issue that autopkgtest is supposed to detect, so I guess in that sense this counts as success :-) Cheers, Martin -- Martin Pitt| http://www.piware.de Ubuntu Developer (www.ubuntu.com) | Debian Developer (www.debian.org) -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
