Bug#922486: python3-sbml5: libsbml fails to import
Hi Andreas, On Sat, 2 Mar 2019 at 07:07, Andreas Tille wrote: > Hi Liubov, > > I've lost this a bit out of sight. Today is the last day for uploading > anything without asking the release team for migration. I definitely > will not be able to work on the issue myself (sponsoring could be an > option but not more). > I've found that the upstream dropped python3 support for this experimental version [1], maybe just temporarily. It is said here [2], they had some issues with python3. They recommend to install libsbml for python from PyPI [3], where the previous 5.17.0 version is the last one. Un saludo, Liubov [1] https://sourceforge.net/projects/sbml/files/libsbml/5.17.2-experimental/binaries/Linux/ [2] https://sourceforge.net/p/sbml/code/25696/ [3] https://pypi.org/project/python-libsbml/
Bug#922486: python3-sbml5: libsbml fails to import
Hi Liubov, I've lost this a bit out of sight. Today is the last day for uploading anything without asking the release team for migration. I definitely will not be able to work on the issue myself (sponsoring could be an option but not more). Kind regards Andreas. On Sun, Feb 17, 2019 at 01:40:21PM +0100, Liubov Chuprikova wrote: > Hi Andreas, > > On Sat, 16 Feb 2019 at 22:43, Andreas Tille wrote: > > > > > If you see any chance to hunt this issue in libsbml down this would be > > really welcome. > > > I would like to fix this if I have time in the following week. I can't say > right now. > > JFI: Just looking onto the files installed with the package, there is no > __init__.py > in the installation directory. So the question is whether it hasn't > generated during > the build or it just hasn't installed properly. > > I'm busy with real life this weekend. > > > > This is awesome! Have a nice weekend! > > __ > Liubov -- http://fam-tille.de
Bug#922486: python3-sbml5: libsbml fails to import
Hi Andreas, On Sat, 16 Feb 2019 at 22:43, Andreas Tille wrote: > > If you see any chance to hunt this issue in libsbml down this would be > really welcome. I would like to fix this if I have time in the following week. I can't say right now. JFI: Just looking onto the files installed with the package, there is no __init__.py in the installation directory. So the question is whether it hasn't generated during the build or it just hasn't installed properly. I'm busy with real life this weekend. > This is awesome! Have a nice weekend! __ Liubov
Bug#922486: python3-sbml5: libsbml fails to import
Hi Liubov, On Sat, Feb 16, 2019 at 10:37:29PM +0100, Liubov Chuprikova wrote: > After installing python3-sbml5, it is not possible to import libsbml module: > > Traceback (most recent call last): > File "", line 1, in > ModuleNotFoundError: No module named 'libsbml' Uhmmm, thanks a lot for spotting this. > I have found it when I was looking into python-cobra package that has > python3-sbml5 in its extra dependencies. If you see any chance to hunt this issue in libsbml down this would be really welcome. I'm busy with real life this weekend. Kind regards Andreas. -- http://fam-tille.de
Bug#922486: python3-sbml5: libsbml fails to import
Package: python3-sbml5 Version: 5.17.2+dfsg-3 Severity: normal Hi, After installing python3-sbml5, it is not possible to import libsbml module: Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'libsbml' I have found it when I was looking into python-cobra package that has python3-sbml5 in its extra dependencies. Liubov -- System Information: Debian Release: buster/sid APT prefers testing APT policy: (900, 'testing'), (800, 'unstable') Architecture: amd64 (x86_64) Kernel: Linux 4.19.0-1-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled
