Bug#962863: r-cran-rdflib: autopkgtest regression

[Nilesh Patra]

On Mon, 15 Jun 2020 11:17:24 +0200 Graham Inggs  wrote:
> Source: r-cran-rdflib
> Version: 0.2.3+dfsg-1
> Severity: serious
> X-Debbugs-CC: debian...@lists.debian.org
> User: debian...@lists.debian.org
> Usertags: regression
>
> Hi Maintainer
>
> Sometime in the last month, r-cran-rdflib started to fail its own
> autopkgtests [1].
> There's a failing migration-reference/0 test in testing on 2020-05-22
> which was before the new r-base migrated.
>
> I've copied what I hope is the relevant part of the log below.

I cannot seem to reproduce the error on my system (using a clean
chroot). Logs:

autopkgtest [17:46:54]: test pkg-r-autopkgtest: ---]
autopkgtest [17:46:54]: test pkg-r-autopkgtest:  - - - - - - - - - -
results - - - - - - - - - -
pkg-r-autopkgtest    PASS
autopkgtest [17:46:54]:  summary
run-unit-test    PASS
pkg-r-autopkgtest    PASS

In the test logs I observed that it _did_
pass on July 15 after it again started to fail yet again - weirdly
enough. Log here[1]
Is it randomly failing here, or is it error at my end?
I'm not sure, please let me know.
This is tagged for removal within a week now, and hence it'd be great if
I can get a response.

[1]:
https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-cran-rdflib/6273992/log.gz

Thanks and Regards,
Nilesh




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Bug#962863: r-cran-rdflib: autopkgtest regression

[Graham Inggs]

Source: r-cran-rdflib
Version: 0.2.3+dfsg-1
Severity: serious
X-Debbugs-CC: debian...@lists.debian.org
User: debian...@lists.debian.org
Usertags: regression

Hi Maintainer

Sometime in the last month, r-cran-rdflib started to fail its own
autopkgtests [1].
There's a failing migration-reference/0 test in testing on 2020-05-22
which was before the new r-base migrated.

I've copied what I hope is the relevant part of the log below.

Regards
Graham


[1] https://ci.debian.net/packages/r/r-cran-rdflib/testing/amd64/


> library(testthat)
> library(rdflib)
>
> test_check("rdflib")
librdf error - XML parser error: Extra content at the end of the document
── 1. Error: @id is not a URI, we should get localhost (@test-parse-serialize.R#
jsonld.InvalidUrllist(code = "loading remote context failed", url =
"http://schema.org/;, cause = list())
Backtrace:
 1. rdflib::rdf_parse(ex, "jsonld")
 2. jsonld::jsonld_to_rdf(...)
 3. jsonld:::store_val()

── 2. Error: @id is a URI, we should not get localhost (@test-parse-serialize.R#
jsonld.InvalidUrllist(code = "loading remote context failed", url =
"http://schema.org/;, cause = list())
Backtrace:
 1. rdflib::rdf_parse(ex, "jsonld")
 2. jsonld::jsonld_to_rdf(...)
 3. jsonld:::store_val()

══ testthat results  ═══
[ OK: 55 | SKIPPED: 6 | WARNINGS: 0 | FAILED: 2 ]
1. Error: @id is not a URI, we should get localhost
(@test-parse-serialize.R#139)
2. Error: @id is a URI, we should not get localhost
(@test-parse-serialize.R#150)

Error: testthat unit tests failed
Execution halted
autopkgtest [06:40:45]: test run-unit-test: ---]
autopkgtest [06:40:45]: test run-unit-test:  - - - - - - - - - -
results - - - - - - - - - -
run-unit-testFAIL non-zero exit status 1