Bug#916768: closed by Mark Hindley (Re: Bug#916768: libelogind-dev-doc: missing Breaks+Replaces: libelogind-dev (<< 239.1+20181115-1))

2018-12-19 Thread Helmut Grohne
Control: reopen 916750

Hi Mark,

On Wed, Dec 19, 2018 at 06:39:04PM +, Debian Bug Tracking System wrote:
> Package: libelogind-dev-doc
> Version: 239.3-4+debian1
> 
> Closing manually as upload had typo in bug number.
> 
> Sorry.

If you noticed your mistake and closed the right bug now, why didn't you
reopen the bug you erroneously closed? Doing so now.

Helmut



Bug#916683: libgnutls30: breaks msmtp 1.6.7-1

2018-12-19 Thread Andreas Metzler
On 2018-12-18 Andreas Metzler  wrote:
> On 2018-12-17 Jonas Smedegaard  wrote:
[...]
> > The hosts I experienced problems with are mail.jones.dk and 
> > mail.homebase.dk - both running Postfix on Debian stable (which made me 
[...]
> Thanks! FWIW as a temporary workaround you can invoke msmtp with
> --tls-priorities=NORMAL:-VERS-TLS1.3

I have just tested with msmtp 1.8.1, it works.

cu Andreas
-- 
`What a good friend you are to him, Dr. Maturin. His other friends are
so grateful to you.'
`I sew his ears on from time to time, sure'



Processed: Re: Bug#916799: dpkg: update-alternatives does not properly deregister obsolete slaves if the link group is currently broken

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 normal
Bug #916799 [dpkg] dpkg: update-alternatives does not properly deregister 
obsolete slaves if the link group is currently broken
Severity set to 'normal' from 'serious'

-- 
916799: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916799
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916799: dpkg: update-alternatives does not properly deregister obsolete slaves if the link group is currently broken

2018-12-19 Thread Guillem Jover
Control: severity -1 normal

Hi!

On Tue, 2018-12-18 at 19:28:35 +0100, Andreas Beckmann wrote:
> Package: dpkg
> Version: 1.19.2
> Severity: serious
> Control: found -1 1.18.25

> there is a problem with update-alternatives not properly deregistering
> obsolete slaves:

> ==
> #!/bin/sh
> 
> update-alternatives --version
> update-alternatives --remove-all foobar
> 
> set -x
> touch /foo /foo.1
> touch /bar /bar.1
> update-alternatives --display foobar
> update-alternatives --install /foobar foobar /foo 23 --slave /foobar.1 
> foobar-1 /foo.1 --slave /barfoo barfoo /bar --slave /barfoo.1 barfoo-1 /bar.1
> update-alternatives --display foobar
> rm /bar /bar.1
> update-alternatives --install /foobar foobar /foo 42 --slave /foobar.1 
> foobar-1 /foo.1
> update-alternatives --display foobar
> update-alternatives --install /foobar foobar /foo 42 --slave /foobar.1 
> foobar-1 /foo.1
> update-alternatives --display foobar
> ==

Thanks for the reproducer, much appreciated!

> # ./foobar.sh 
[…]

> So this is reproducible in stretch, too, but not in jessie.

It is actually reproducible in both, it is just not obviosly visible
in jessie. What made this visible was the change from commit
55661248cc3028446b9e73eb17e41fa12aad2b54 which started printing the
master and slave links on --display. But if you check the database
(/var/lib/dpkg/alternatives/foobar) you'll see they are present even
in 1.17.x and earlier. I've not checked whether the perl implementation
suffered the same problem, but I assume it did not, and it seems this
was a regression from the C rewrite.

> The problem does not occur if there is only a single broken slave to be
> removed.

Right, because this is a problem with the way the slave links are
removed from the single linked list.

I've lowered the severity, because this is a self-healing problem, and
on each new call the remaining obsolete slave links will get removed,
even if slowly. :)

The attached patch should fix it.

Thanks,
Guillem
diff --git i/utils/update-alternatives.c w/utils/update-alternatives.c
index 88db6e274..79dbd10c7 100644
--- i/utils/update-alternatives.c
+++ w/utils/update-alternatives.c
@@ -1373,7 +1373,7 @@ alternative_save(struct alternative *a)
 
 	/* Cleanup unused slaves before writing admin file. */
 	sl_prev = NULL;
-	for (sl = a->slaves; sl; sl_prev = sl, sl = sl->next) {
+	for (sl = a->slaves; sl; ) {
 		bool has_slave = false;
 
 		for (fs = a->choices; fs; fs = fs->next) {
@@ -1393,10 +1393,11 @@ alternative_save(struct alternative *a)
 			else
 a->slaves = sl->next;
 			sl_rm = sl;
-			sl = sl_prev ? sl_prev : a->slaves;
+			sl = sl->next;
 			slave_link_free(sl_rm);
-			if (!sl)
-break; /* No other slave left. */
+		} else {
+			sl_prev = sl;
+			sl = sl->next;
 		}
 	}
 


Bug#916900: Fails to install: installed dash package post-installation script subprocess returned error exit status 1

2018-12-19 Thread Michael Biebl
Package: dash
Version: 0.5.10.2-3
Severity: serious

When running "debootstrap sid /path/to/chroot", dash fails to install

Setting up dash (0.5.10.2-3) ...
dpkg-divert: warning: please specify --no-rename explicitly, the default will 
change to --rename in 1.20.x
No diversion 'diversion of /bin/sh by dash', none removed.
This should never be reached
dpkg: error processing package dash (--configure):
 installed dash package post-installation script subprocess returned error exit 
status 1
Setting up init-system-helpers (1.56+nmu1) ...
Setting up libpam0g:amd64 (1.1.8-3.8) ...
Setting up libpam-modules-bin (1.1.8-3.8) ...
Setting up libpam-modules:amd64 (1.1.8-3.8) ...
Setting up libpam-runtime (1.1.8-3.8) ...
Setting up passwd (1:4.5-1.1) ...
Shadow passwords are now on.
Setting up login (1:4.5-1.1) ...
Setting up adduser (3.118) ...
Setting up util-linux (2.33-0.2) ...
update-alternatives: using /bin/more to provide /usr/bin/pager (pager) in auto 
mode
Setting up mount (2.33-0.2) ...
Setting up sysvinit-utils (2.93-1) ...
Setting up apt (1.8.0~alpha3) ...
Processing triggers for libc-bin (2.28-3) ...
Errors were encountered while processing:
 dash


Full debootstrap log attached.


-- System Information:
Debian Release: buster/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (200, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), 
LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages dash depends on:
ii  debconf [debconf-2.0]  1.5.69
ii  debianutils4.8.6
ii  dpkg   1.19.2+test3
ii  libc6  2.28-3

dash recommends no packages.

dash suggests no packages.

-- debconf information:
* dash/sh: true
amd64: ok
2018-12-20 04:24:57 
URL:http://cdn-fastly.deb.debian.org/debian/dists/sid/InRelease [237339/237339] 
-> 
"/srv/chroot/sid/var/lib/apt/lists/partial/deb.debian.org_debian_dists_sid_InRelease"
 [1]
gpgv: Signature made Wed Dec 19 21:25:00 2018 CET
gpgv:using RSA key A1BD8E9D78F7FE5C3E65D8AF8B48AD6246925553
gpgv: Can't check signature: No public key
gpgv: Signature made Wed Dec 19 21:25:00 2018 CET
gpgv:using RSA key 126C0D24BD8A2942CC7DF8AC7638D0442B90D010
gpgv: Good signature from "Debian Archive Automatic Signing Key (8/jessie) 
"
gpgv: Signature made Wed Dec 19 21:25:00 2018 CET
gpgv:using RSA key 16E90B3FDF65EDE3AA7F323C04EE7237B7D453EC
gpgv: Good signature from "Debian Archive Automatic Signing Key (9/stretch) 
"
2018-12-20 04:25:00 
URL:http://cdn-fastly.deb.debian.org/debian/dists/sid/main/binary-amd64/by-hash/SHA256/34a6a23bd86422b82eb3b10fa606fdc78ad949bf7fee82bfda7a0487cc0a73fb
 [8313264/8313264] -> 
"/srv/chroot/sid/var/lib/apt/lists/partial/deb.debian.org_debian_dists_sid_main_binary-amd64_Packages.xz"
 [1]
2018-12-20 04:25:54 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/acl/libacl1_2.2.52-3+b1_amd64.deb
 [28110/28110] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/libacl1_2.2.52-3+b1_amd64.deb" 
[1]
2018-12-20 04:25:54 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/adduser/adduser_3.118_all.deb
 [240384/240384] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/adduser_3.118_all.deb" [1]
2018-12-20 04:25:55 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/apparmor/libapparmor1_2.13.1-3+b1_amd64.deb
 [92824/92824] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/libapparmor1_2.13.1-3+b1_amd64.deb"
 [1]
2018-12-20 04:25:55 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/apt/apt_1.8.0~alpha3_amd64.deb
 [1307568/1307568] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/apt_1.8.0~alpha3_amd64.deb" [1]
2018-12-20 04:25:56 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/apt/apt-utils_1.8.0~alpha3_amd64.deb
 [421680/421680] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/apt-utils_1.8.0~alpha3_amd64.deb"
 [1]
2018-12-20 04:25:56 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/apt/libapt-inst2.0_1.8.0~alpha3_amd64.deb
 [202792/202792] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/libapt-inst2.0_1.8.0~alpha3_amd64.deb"
 [1]
2018-12-20 04:25:56 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/apt/libapt-pkg5.0_1.8.0~alpha3_amd64.deb
 [958172/958172] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/libapt-pkg5.0_1.8.0~alpha3_amd64.deb"
 [1]
2018-12-20 04:25:57 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/argon2/libargon2-1_0~20171227-0.1_amd64.deb
 [20600/20600] -> 
"/srv/chroot/sid//var/cache/apt/archives/partial/libargon2-1_0~20171227-0.1_amd64.deb"
 [1]
2018-12-20 04:25:57 
URL:http://cdn-fastly.deb.debian.org/debian/pool/main/a/attr/libattr1_2.4.47-2+b2_amd64.deb
 [18356/18356] -> 

Processed: Re: dash: Update dpkg-divert usage

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 minor
Bug #916319 [src:dash] dash: Update dpkg-divert usage
Severity set to 'minor' from 'serious'

-- 
916319: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916319
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916319: dash: Update dpkg-divert usage

2018-12-19 Thread Michael Biebl
Control: severity -1 minor

Am 20.12.18 um 04:31 schrieb Michael Biebl:
.
> Errors were encountered while processing:
>  dash
> 
> Bumping the bug report to serious given this failure.
> 
> 

Hm, probably better to file a new bug report with proper version
tracking to prevent testing migration.
Restoring original severity.

-- 
Why is it that all of the instruments seeking intelligent life in the
universe are pointed away from Earth?



signature.asc
Description: OpenPGP digital signature


Bug#916879: qtox: missing library libsodium.so.18

2018-12-19 Thread Yangfl
$ sudo apt install --reinstall qtox
[...]
$ ldd /usr/bin/qtox | grep sod
libsodium.so.23 => /usr/lib/x86_64-linux-gnu/libsodium.so.23
(0x7f8415cc9000)
$ ll /usr/lib/x86_64-linux-gnu/libsodium.so*
lrwxrwxrwx 1 root root   19 12月 26  2017
/usr/lib/x86_64-linux-gnu/libsodium.so.23 -> libsodium.so.23.1.0
-rw-r--r-- 1 root root 331K 12月 26  2017
/usr/lib/x86_64-linux-gnu/libsodium.so.23.1.0



Processed: Re: dash: Update dpkg-divert usage

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 serious
Bug #916319 [src:dash] dash: Update dpkg-divert usage
Severity set to 'serious' from 'minor'

-- 
916319: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916319
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915886: Workaround

2018-12-19 Thread Rich
So, yes, the workaround Ben posted will work, but that's fixing the
symptom, not the problem.

I'd still like to know what the enum-extract.pl script says for you
(Ben) if you try invoking it (or what's in config.log when it fails).

Because the problem with the common/amd64 headers location should be
fixed already [1], it's possible you're having a separate problem;
that error output is just what happens when enum-extract.pl doesn't
output what's expected.

- Rich

[1] - https://github.com/zfsonlinux/zfs/issues/7358



Bug#916061: marked as done (diod FTBFS with glibc 2.28)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Thu, 20 Dec 2018 01:50:28 +
with message-id 
and subject line Bug#916061: fixed in diod 1.0.24-4
has caused the Debian Bug report #916061,
regarding diod FTBFS with glibc 2.28
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916061: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916061
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: diod
Version: 1.0.24-3
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/diod.html

...
ops.c: In function 'diod_mknod':
ops.c:808:38: warning: implicit declaration of function 'makedev' 
[-Wimplicit-function-declaration]
 if (mknod (path_s (npath), mode, makedev (major, minor)) < 0
  ^~~
gcc -Wall -g -O2 -ffile-prefix-map=/build/1st/diod-1.0.24=. 
-fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o diod 
diod.o ops.o exp.o ioctx.o fid.o xattr.o ../libdiod/libdiod.a 
../libnpclient/libnpclient.a ../libnpfs/libnpfs.a ../liblsd/liblsd.a -lwrap 
-lpthread -llua5.1  -lm -ldl -lmunge -lcap
/usr/bin/ld: ops.o: in function `diod_mknod':
./diod/ops.c:808: undefined reference to `makedev'
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:460: diod] Error 1
--- End Message ---
--- Begin Message ---
Source: diod
Source-Version: 1.0.24-4

We believe that the bug you reported is fixed in the latest version of
diod, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Євгеній Мещеряков  (supplier of updated diod package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 20 Dec 2018 02:04:48 +0100
Source: diod
Binary: diod
Architecture: source
Version: 1.0.24-4
Distribution: unstable
Urgency: medium
Maintainer: Євгеній Мещеряков 
Changed-By: Євгеній Мещеряков 
Description:
 diod   - I/O forwarding server for 9P
Closes: 916061
Changes:
 diod (1.0.24-4) unstable; urgency=medium
 .
   * New patches:
 - include-sysmacros_h.diff - fix FTBFS because of undefined reference to
   makedev (closes: #916061)
   * Depend on lsb-base, this fixes a lintian warning
   * Standards-Version 4.2.1 - no changes needed
   * Move packaging to salsa.debian.org and update Vcs fields accordingly
Checksums-Sha1:
 7cf3ca768a914227a74f83a7050a9d554187d0cf 2004 diod_1.0.24-4.dsc
 88c07d161104b15c391eb84e72e1a1cb4ced3569 6488 diod_1.0.24-4.debian.tar.xz
 46b36966b6a22edd5e9906aa37aa8d0de0754234 6362 diod_1.0.24-4_source.buildinfo
Checksums-Sha256:
 865f70a3d8b2e92da51ecc16478f0d9f67e1b24b87ac8dc946609adbf8323021 2004 
diod_1.0.24-4.dsc
 39d314958d45722ba01628218e3e617b286a691ee395d2acb489c470040d891c 6488 
diod_1.0.24-4.debian.tar.xz
 7ed970ec247ec900ce9af1885ec11f3e2071f7f9236412139c5865f4f9fbe48d 6362 
diod_1.0.24-4_source.buildinfo
Files:
 5a2684cd00bb7c68bff04ca310f23c5a 2004 admin optional diod_1.0.24-4.dsc
 26a618be5d7aa19d99ab7846471be515 6488 admin optional 
diod_1.0.24-4.debian.tar.xz
 5a218e37ed8c174b9216b1dadd678a28 6362 admin optional 
diod_1.0.24-4_source.buildinfo

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Bug#916839: imagemagick: Silent ABI break in 6.9.10-11 on i386

2018-12-19 Thread Bastien ROUCARIES
On Wed, Dec 19, 2018 at 12:09 PM Balint Reczey
 wrote:
>
> Package: imagemagick
> Version: 8:6.9.10.14+dfsg-1
> Severity: grave
> Control: forwareded -1 https://github.com/ImageMagick/ImageMagick6/issues/31
> Control: tags -1 upstream fixed-upstream
> Control: affects -1 ruby-rmagick
>
> Hi,
>
> The ABI broke in 6.9.10-11 due to changing MagickDoubleType to double
> from long double.
> This breaks ruby-rmagick and possibly other reverse dependencies, thus
> after fixing imagemagick please check if some reverse dependencies
> need to be rebuilt. The fix will be available in the .18 upstream
> release.

Exact, this will need a so bump I suppose...

Bastien



>
> Cheers,
> Balint
>
> --
> Balint Reczey
> Ubuntu & Debian Developer
>



Processed: Re: Bug#789008: At least on Debian testing it upgraded without an issue.

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 +moreinfo
Bug #789008 [insserv] dbus: Unable to configure package (dpkg)
Bug #746170 [insserv] insserv: Still fails due to rpcbind/nfs
Ignoring request to alter tags of bug #789008 to the same tags previously set
Ignoring request to alter tags of bug #746170 to the same tags previously set

-- 
746170: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=746170
789008: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=789008
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#789008: At least on Debian testing it upgraded without an issue.

2018-12-19 Thread Dmitry Bogatov


control: tags -1 +moreinfo

[2018-12-18 12:10] shirish शिरीष 
>
> Dear all,
> 
> At least here it updated without any issues -
> 
> $ sudo aptitude install insserv -y
> The following packages will be upgraded:
>   insserv
> [...]

Thank you for help with bug triage, shirish.

Dear submitter, can you reproduce issue?  Note, that insserv=1.16 is no
longer relevant, since now insserv=1.18 in sid and insserv=1.14 in
stable.



Processed: Re: Bug#789008: At least on Debian testing it upgraded without an issue.

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 +moreinfo
Bug #789008 [insserv] dbus: Unable to configure package (dpkg)
Bug #746170 [insserv] insserv: Still fails due to rpcbind/nfs
Added tag(s) moreinfo.
Added tag(s) moreinfo.

-- 
746170: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=746170
789008: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=789008
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: limit source to diod, tagging 916061

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> limit source diod
Limiting to bugs with field 'source' containing at least one of 'diod'
Limit currently set to 'source':'diod'

> tags 916061 + pending
Bug #916061 [src:diod] diod FTBFS with glibc 2.28
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
916061: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916061
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915886: Probable work-around

2018-12-19 Thread Ben McCann
The issue is that Debian delivers Linux headers in two directories, each of
which is linked under /lib/modules. On my system, with 4.14, these symlinks
are under /lib/modules/4.14.0-3-amd64:

cd /lib/modules/4.14.0-3-amd64

ls -ld build source
lrwxrwxrwx 1 root root 37 Jan 25 2018 build ->
/usr/src/linux-headers-4.14.0-3-amd64
lrwxrwxrwx 1 root root 38 Jan 25 2018 source ->
/usr/src/linux-headers-4.14.0-3-common

The zfs-dkms 'configure' script assumes the Linux include files are
accessible via the 'build' symlink but that only provides access to amd64
CPU dependent files. All the rest of the linux header files are accessible
via 'source' which points to the 'common' header files. That breaks the
zfs-dkms build when 'dkms' runs the 'configure' command.

The work-around creates a symlink to
/usr/src/linux-headers-4.14.0-3-common/include/linux under
linux-headers-4.14.0--amd64 so the configure script can find the files it
needs:

cd /usr/src/linux-headers-4.14.0-3-amd64
ln -s /usr/src/linux-headers-4.14.0-3-common/include/linux .

Now 'build/include/linux' points to the linux headers:

ls -l /lib/modules/4.14.0-3-amd64/build/include/
total 76
drwxr-xr-x 698 root root 69632 Dec 19 09:54 config
drwxr-xr-x 3 root root 4096 Dec 19 09:54 generated
lrwxrwxrwx 1 root root 52 Dec 19 11:22 linux ->
/usr/src/linux-headers-4.14.0-3-common/include/linux

Substitute your kernel version du jour for 4.14.0-3. I've only tested this
with 4.14 so YMMV with other kernel versions.


Bug#913050: marked as done (batik: FTBFS with Java 11 due to SecurityManager.checkSystemClipboardAccess() removal)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 23:49:09 +
with message-id 
and subject line Bug#913050: fixed in batik 1.10-2
has caused the Debian Bug report #913050,
regarding batik: FTBFS with Java 11 due to 
SecurityManager.checkSystemClipboardAccess() removal
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
913050: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913050
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: batik
Version: 1.10-1
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/batik.html

...
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
/build/1st/batik-1.10/batik-swing/src/main/java/org/apache/batik/swing/gvt/JGVTComponent.java:[1275,35]
 error: cannot find symbol
  symbol:   method checkSystemClipboardAccess()
  location: variable securityManager of type SecurityManager
[INFO] 1 error
--- End Message ---
--- Begin Message ---
Source: batik
Source-Version: 1.10-2

We believe that the bug you reported is fixed in the latest version of
batik, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 913...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Emmanuel Bourg  (supplier of updated batik package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Date: Thu, 20 Dec 2018 00:28:22 +0100
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Architecture: source
Version: 1.10-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Java Maintainers 

Changed-By: Emmanuel Bourg 
Description:
 libbatik-java - xml.apache.org SVG Library
Closes: 902532 913050
Changes:
 batik (1.10-2) unstable; urgency=medium
 .
   * Team upload.
   * Fixed the build failure with Java 11 (Closes: #913050)
   * Tightened the version of maven-debian-helper required to build batik
 (Closes: #902532)
   * Standards-Version updated to 4.2.1
   * Use salsa.debian.org Vcs-* URLs
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Bug#836934: Does it make sense to keep frobtads?

2018-12-19 Thread Sebastian Andrzej Siewior
Hi,

frobtads wasn't part of Stretch and has two RC bugs open with no action
in over a year.
Can it be removed or is somehow important?

Sebastian



Bug#915804: Should this package be removed?

2018-12-19 Thread Sebastian Andrzej Siewior
On 2018-12-06 22:52:32 [+0100], Moritz Muehlenhoff wrote:
> Source: cfengine2
> Severity: serious
> 
> This is replaced by src:cfengine2 and stretch has both cfengine2 and 
> cfengine3,
> so users can migrate within a stable release to 3.
> 
> The current version is also RC-buggy for a long time and blocks the removal
> of OpenSSL 1.0.

cfengine2 is like a decade old. I found nothing in their blog. Only the
convert tool:
  https://cfengine.com/company/blog-detail/cfengine-2-conversion-tool/

popcon wise there are more 2 installation than 3. Is there a reason to
still keep it around rather than RM it and let the users switch to 3?

> Cheers,
> Moritz
> 

Sebastian



Bug#915994: marked as done (spooles FTBFS with multiarchified openmpi >= 3.1.3-3)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 23:34:51 +
with message-id 
and subject line Bug#915994: fixed in spooles 2.2-14
has caused the Debian Bug report #915994,
regarding spooles FTBFS with multiarchified openmpi >= 3.1.3-3
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
915994: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=915994
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: spooles
Version: 2.2-13
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/spooles.html

...
In file included from aggListMPI.c:3:
../spoolesMPI.h:6:10: fatal error: mpi.h: No such file or directory
 #include 
  ^~~
compilation terminated.
make[5]: *** [makeG:38: aggListMPI.o] Error 1
--- End Message ---
--- Begin Message ---
Source: spooles
Source-Version: 2.2-14

We believe that the bug you reported is fixed in the latest version of
spooles, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 915...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons  (supplier of updated spooles package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 19 Dec 2018 23:56:58 +0100
Source: spooles
Binary: libspooles-dev libspooles2.2 spooles-doc
Architecture: source
Version: 2.2-14
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libspooles-dev - SPOOLES SParse Object Oriented Linear Equations Solver 
developmen
 libspooles2.2 - SPOOLES SParse Object Oriented Linear Equations Solver shared 
lib
 spooles-doc - SPOOLES numerical simulation pre- and post-processor documentatio
Closes: 915994
Changes:
 spooles (2.2-14) unstable; urgency=medium
 .
   * Team upload.
   * update MPI paths in makefiles.patch for multiarch. Closes: #915994.
   * Standards-Version: 4.2.1
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Processed: Bug #913050 in batik marked as pending

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #913050 [src:batik] batik: FTBFS with Java 11 due to 
SecurityManager.checkSystemClipboardAccess() removal
Added tag(s) pending.

-- 
913050: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913050
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#913050: Bug #913050 in batik marked as pending

2018-12-19 Thread Emmanuel Bourg
Control: tag -1 pending

Hello,

Bug #913050 in batik reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/java-team/batik/commit/117eff76db3ff30a4b3423e0175b2927167da552


Fixed the build failure with Java 11 (Closes: #913050)


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/913050



Bug#907624: What ffindex do we want to package

2018-12-19 Thread Steffen Möller

Hi Andreas,

the reverse dependency HH-suite failed to compile with the ffindex 
version Debian shipped.


I have no feelings about it. It should just work :)  The HH-suite is 
about structure prediction from sequence homology, which I found we 
should continue to offer in our distribution 
https://en.wikipedia.org/wiki/HH-suite 
https://tracker.debian.org/pkg/hhsuite . Are there other reverse 
dependencies for ffindex in our distribution?


Priority is the HH-suite. Then ffindex. If difficulties surface anywhere 
then we have initiate some head scratching / banging. If there is 
nothing happening somewhere that I don't know about then I would leave 
it as it is.


Cheers,

Steffen

On 19.12.18 09:53, Andreas Tille wrote:

Hi,

after reading https://github.com/soedinglab/ffindex_soedinglab/issues/4
I came to the conclusion that we somehow picked the wrong fork of
ffindex.  For me it seems very probable that if we pick the old codebase
bug #907624 which was introduced when choosing this will vanish if we
revert to the previously packaged code base.  I have a local commit
which is doing this:


diff --git a/debian/changelog b/debian/changelog
index 6a26115..c409f4f 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,12 @@
+ffindex (0.9.9.7+sog+git20160415.14274c9-1) UNRELEASED; urgency=medium
+
+  * The previous location on Github was an improperly choosen fork
+(see https://github.com/soedinglab/ffindex_soedinglab/issues/4)
+Here the version is now named "0.9.9.7+sog" (Saved On Github)
+to make it alphabethically later than the previous one.
+
+ -- Andreas Tille   Wed, 19 Dec 2018 09:16:09 +0100
+
  ffindex (0.9.9.7+soedinglab+git20180802.74550c8-1) unstable; urgency=medium
  
* Fix watch file (version should actually be +git20171201.74550c8 but

diff --git a/debian/watch b/debian/watch
index 91b4f38..b47f123 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,4 +1,4 @@
  version=4
  
-opts="mode=git,pretty=0.9.9.7+soedinglab+git%cd.%h" \

-https://github.com/soedinglab/ffindex_soedinglab.git HEAD
+opts="mode=git,pretty=0.9.9.7+sog+git%cd.%h" \
+https://github.com/ahcm/ffindex.git HEAD



Upstream at github.com/ahcm/ffindex was extremely quick to tag a
release and so it is at least active.

Steffen, was your pick intentional or did you just stumbled by chance
over the other fork?  Are you OK with reverting to the old code?

Kind regards

   Andreas.

PS: I reported the segfault issue to the according fork anyway
 https://github.com/soedinglab/ffindex_soedinglab/issues/7






Bug#916565: closed by Alastair McKinstry (Bug#916565: fixed in dh-fortran-mod 0.6)

2018-12-19 Thread Andreas Beckmann
Control: clone -1 -2
Control: reopen -2
Control: reassign -2 libopenmpi3,openmpi-common,openmpi-doc
Control: found -2 3.1.3-5
Control: retitle -2 libopenmpi3,openmpi-{common,doc}: needs to be rebuilt with 
dh-fortran-mod 0.6

Since this bugs affects arch:all packages, binNMUs are not sufficient, 
but a sourceful upload is needed (which of course should be source-only)
(Maybe bump the version of the dh-fortran-mod B-D to be sure to get the
right one)

But this rises the question: Why does dh-fortran-mod insert its code 
snippets into the arch:all openmpi-doc and openmpi-common packages, that
don't seem to contain fortran bits?
And libopenmpi3 does neither ...


Andreas



Processed: Re: Bug#916565 closed by Alastair McKinstry (Bug#916565: fixed in dh-fortran-mod 0.6)

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> clone -1 -2
Bug #916565 {Done: Alastair McKinstry } [dh-fortran-mod] 
libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script 
subprocess returned error exit status 1
Bug 916565 cloned as bug 916890
> reopen -2
Bug #916890 {Done: Alastair McKinstry } [dh-fortran-mod] 
libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script 
subprocess returned error exit status 1
'reopen' may be inappropriate when a bug has been closed with a version;
all fixed versions will be cleared, and you may need to re-add them.
Bug reopened
No longer marked as fixed in versions dh-fortran-mod/0.6.
> reassign -2 libopenmpi3,openmpi-common,openmpi-doc
Bug #916890 [dh-fortran-mod] libopenmpi3,openmpi-{common,doc}: fails to remove: 
post-removal script subprocess returned error exit status 1
Bug reassigned from package 'dh-fortran-mod' to 
'libopenmpi3,openmpi-common,openmpi-doc'.
Ignoring request to alter found versions of bug #916890 to the same values 
previously set
Ignoring request to alter fixed versions of bug #916890 to the same values 
previously set
> found -2 3.1.3-5
Bug #916890 [libopenmpi3,openmpi-common,openmpi-doc] 
libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script 
subprocess returned error exit status 1
Marked as found in versions openmpi/3.1.3-5.
> retitle -2 libopenmpi3,openmpi-{common,doc}: needs to be rebuilt with 
> dh-fortran-mod 0.6
Bug #916890 [libopenmpi3,openmpi-common,openmpi-doc] 
libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script 
subprocess returned error exit status 1
Changed Bug title to 'libopenmpi3,openmpi-{common,doc}: needs to be rebuilt 
with dh-fortran-mod 0.6' from 'libopenmpi3,openmpi-{common,doc}: fails to 
remove: post-removal script subprocess returned error exit status 1'.

-- 
916565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916565
916890: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916890
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: tagging 840748

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 840748 + stretch
Bug #840748 [edb] edb: install script failed for emacs25 because of :indent 
keyword
Added tag(s) stretch.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
840748: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=840748
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916885: pass-tomb: depends on kcov which is not in testing

2018-12-19 Thread Sebastian Andrzej Siewior
Package: pass-tomb
Version: 1.1-2
Severity: serious

pass-tomb build-depends on kcov which is not in testing. britney migrated
the package to testing regardless. However the package is not fit for a
release because it can not be built in testing as of now [0].

This bug can be closed either once kcov migrates to testing or if
pass-tomb drops the build-dependency on kcov.

[0] 
https://tests.reproducible-builds.org/debian/rb-pkg/buster/amd64/pass-tomb.html

Sebastian



Bug#912231: marked as done (bnd: FTBFS with Java 11 due to conflict with OutputStream.nullOutputStream())

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 22:04:07 +
with message-id 
and subject line Bug#912231: fixed in bnd 3.5.0-4
has caused the Debian Bug report #912231,
regarding bnd: FTBFS with Java 11 due to conflict with 
OutputStream.nullOutputStream()
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
912231: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912231
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: bnd
Version: 3.5.0-3
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/bnd.html

...
Compiling with JDK Java compiler API.
Generated bundles: 
[/build/1st/bnd-3.5.0/biz.aQute.tester/generated/biz.aQute.tester.jar]
:biz.aQute.tester:jar (Thread[Task worker for ':' Thread 9,5,main]) completed. 
Took 0.132 secs.
/build/1st/bnd-3.5.0/biz.aQute.remote/src/aQute/remote/agent/RedirectOutput.java:41:
 error: nullOutputStream() in RedirectOutput cannot override nullOutputStream() 
in OutputStream
private static PrintStream nullOutputStream() {
   ^
  attempting to assign weaker access privileges; was public
1 error
:biz.aQute.remote:compileJava FAILED
:biz.aQute.remote:compileJava (Thread[Task worker for ':' Thread 3,5,main]) 
completed. Took 0.596 secs.
:biz.aQute.repository:compileJava (Thread[Task worker for ':' Thread 
11,5,main]) completed. Took 1.962 secs.

FAILURE: Build failed with an exception.
--- End Message ---
--- Begin Message ---
Source: bnd
Source-Version: 3.5.0-4

We believe that the bug you reported is fixed in the latest version of
bnd, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 912...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Emmanuel Bourg  (supplier of updated bnd package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 19 Dec 2018 22:48:21 +0100
Source: bnd
Binary: bnd
Architecture: source
Version: 3.5.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Java Maintainers 

Changed-By: Emmanuel Bourg 
Description:
 bnd- tool to create and diagnose OSGi bundles
Closes: 912231
Changes:
 bnd (3.5.0-4) unstable; urgency=medium
 .
   * Fixed the build failure with Java 11 (Closes: #912231)
   * Fixed the build failure caused by gradle-debian-helper 2.0.1
   * Ignore the dependency on xml-apis
   * Use salsa.debian.org Vcs-* URLs
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Bug#916606: lbreakout2: randomly pauses ingame without external actions

2018-12-19 Thread Erik Ziemek
Hi,

after compiling the game myself I've done some tests.

The pause occurs in game.c line 1171. If got there by the SDL_ACTIVEEVENT with 
state 2 (SDL_APPINPUTFOCUS) and gain 0.

See: https://www.libsdl.org/release/SDL-1.2.15/docs/html/sdlactiveevent.html

Kind regards,
bitfreak25



Bug#912231: Bug #912231 in bnd marked as pending

2018-12-19 Thread Emmanuel Bourg
Control: tag -1 pending

Hello,

Bug #912231 in bnd reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/java-team/bnd/commit/50d45ef12b357a36aa7906e221f79301eba334f8


Fixed the build failure with Java 11 (Closes: #912231)


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/912231



Bug#913397: marked as done (ucommon FTBFS: new symbols)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 21:49:36 +
with message-id 
and subject line Bug#913397: fixed in ucommon 7.0.0-15
has caused the Debian Bug report #913397,
regarding ucommon FTBFS: new symbols
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
913397: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913397
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: ucommon
Version: 7.0.0-14
Severity: serious
Tags: ftbfs

Some recent change in unstable makes ucommon FTBFS:

https://tests.reproducible-builds.org/debian/history/ucommon.html
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/ucommon.html

...
   debian/rules override_dh_strip
make[1]: Entering directory '/build/1st/ucommon-7.0.0'
dh_strip --dbgsym-migration='libucommon8-dbg (<< 7.0.0-7~)'
make[1]: Leaving directory '/build/1st/ucommon-7.0.0'
   dh_makeshlibs
dpkg-gensymbols: error: some new symbols appeared in the symbols file: see diff 
output below
dpkg-gensymbols: warning: debian/libucommon8/DEBIAN/symbols doesn't match 
completely debian/libucommon8.symbols
--- debian/libucommon8.symbols (libucommon8_7.0.0-14_amd64)
+++ dpkg-gensymbolsLvPJvE   2019-12-13 07:43:27.773789987 -1200
@@ -14,6 +14,8 @@
  (c++)"VTT for ost::TTYStream@Base" 7.0.0
  (c++)"VTT for ost::ThreadQueue@Base" 7.0.0
  (c++)"VTT for ost::ttystream@Base" 7.0.0
+ 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N3ost4Slog5LevelEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE14_M_insert_nodeEPSt18_Rb_tree_node_baseSJ_PSt13_Rb_tree_nodeISB_E@Base
 7.0.0-14
+ 
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_N3ost4Slog5LevelEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE17_M_emplace_uniqueIJS6_IS5_SA_S6_ISt17_Rb_tree_iteratorISB_EbEDpOT_@Base
 7.0.0-14
  (c++)"non-virtual thunk to ost::AppLog::~AppLog()@Base" 7.0.0
  (c++)"non-virtual thunk to ost::SerialService::~SerialService()@Base" 7.0.0
  (c++)"non-virtual thunk to ost::SharedMemPager::~SharedMemPager()@Base" 7.0.0
@@ -717,7 +719,7 @@
  (c++|optional=templinst)"std::_Rb_tree, std::allocator >, 
std::pair, 
std::allocator > const, ost::Slog::Level>, 
std::_Select1st, std::allocator > const, ost::Slog::Level> >, 
std::less, 
std::allocator > >, 
std::allocator, std::allocator > const, ost::Slog::Level> > 
>::_M_get_insert_hint_unique_pos(std::_Rb_tree_const_iterator, std::allocator > const, ost::Slog::Level> >, 
std::__cxx11::basic_string, std::allocator > 
const&)@Base" 7.0.0
  (c++|optional=templinst)"std::_Rb_tree, std::allocator >, 
std::pair, 
std::allocator > const, ost::Slog::Level>, 
std::_Select1st, std::allocator > const, ost::Slog::Level> >, 
std::less, 
std::allocator > >, 
std::allocator, std::allocator > const, ost::Slog::Level> > 
>::_M_get_insert_unique_pos(std::__cxx11::basic_string, std::allocator > const&)@Base" 7.0.0
  (c++|optional=templinst)"std::_Rb_tree, std::allocator >, 
std::pair, 
std::allocator > const, ost::Slog::Level>, 
std::_Select1st, std::allocator > const, ost::Slog::Level> >, 
std::less, 
std::allocator > >, 
std::allocator, std::allocator > const, ost::Slog::Level> > 
>::find(std::__cxx11::basic_string, 
std::allocator > const&)@Base" 7.0.0
- (c++|optional)"std::_Rb_tree_iterator > std::_Rb_tree, 
std::_Select1st >, 
std::less, 
std::allocator > 
>::_M_emplace_hint_unique, std::tuple<> 
>(std::_Rb_tree_const_iterator 
>, std::piecewise_construct_t const&, std::tuple&&, std::tuple<>&&)@Base" 7.0.0
+#MISSING: 7.0.0-14# 
(c++|optional)"std::_Rb_tree_iterator > std::_Rb_tree, 
std::_Select1st >, 
std::less, 
std::allocator > 
>::_M_emplace_hint_unique, std::tuple<> 
>(std::_Rb_tree_const_iterator 
>, std::piecewise_construct_t const&, std::tuple&&, std::tuple<>&&)@Base" 7.0.0
  
(c++|optional)"std::_Rb_tree_iterator, std::allocator > const, ost::Slog::Level> > 
std::_Rb_tree, 
std::allocator >, std::pair, std::allocator > const, ost::Slog::Level>, 
std::_Select1st, std::allocator > const, ost::Slog::Level> >, 
std::less, 
std::allocator > >, 
std::allocator, std::allocator > const, ost::Slog::Level> > 
>::_M_emplace_hint_unique, 
std::allocator > const&>, std::tuple<> 
>(std::_Rb_tree_const_iterator, std::allocator > const, ost::Slog::Level> >, 
std::piecewise_construct_t const&, std::tuple, std::allocator > const&>&&, std::tuple<>&&)@Base" 
7.0.0
  (c++|optional=templinst)"std::__cxx11::basic_stringbuf, std::allocator >::~basic_stringbuf()@Base" 7.0.0
  (c++|optional=templinst)"std::ctype::do_widen(char) const@Base" 7.0.0
dh_makeshlibs: failing due to earlier errors
make: *** [debian/rules:11: 

Bug#909865: marked as done (openexr FTBFS on i386 with gcc 8)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 21:49:29 +
with message-id 
and subject line Bug#909865: fixed in openexr 2.3.0-3
has caused the Debian Bug report #909865,
regarding openexr FTBFS on i386 with gcc 8
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
909865: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=909865
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: openexr
Version: 2.2.1-4
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/openexr.html

...
compression 6, x sampling 2, y sampling 2: writing reading comparing
compression 7, x sampling 2, y sampling 2: writing reading comparing
compression 8, x sampling 2, y sampling 2: writing reading comparing
compression 9, x sampling 2, y sampling 2: writing reading comparing
random bits
compression 0, x sampling 1, y sampling 1: writing reading comparingIlmImfTest: 
testCompression.cpp:330: void {anonymous}::writeRead(const 
Imf_2_2::Array2D&, const Imf_2_2::Array2D&, const 
Imf_2_2::Array2D&, const char*, int, int, int, int, 
Imf_2_2::Compression, int, int): Assertion `equivalent (pf1[y][x], pf2[y][x], 
comp)' failed.
FAIL IlmImfTest (exit status: 134)


Testsuite summary for OpenEXR 2.2.1

# TOTAL: 1
# PASS:  0
# SKIP:  0
# XFAIL: 0
# FAIL:  1
# XPASS: 0
# ERROR: 0

See IlmImfTest/test-suite.log

make[5]: *** [Makefile:966: test-suite.log] Error 1
--- End Message ---
--- Begin Message ---
Source: openexr
Source-Version: 2.3.0-3

We believe that the bug you reported is fixed in the latest version of
openexr, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 909...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Mathieu Malaterre  (supplier of updated openexr package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 19 Dec 2018 21:41:08 +0100
Source: openexr
Binary: openexr openexr-doc libopenexr-dev libopenexr23
Architecture: source
Version: 2.3.0-3
Distribution: experimental
Urgency: medium
Maintainer: Debian PhotoTools Maintainers 

Changed-By: Mathieu Malaterre 
Description:
 libopenexr-dev - development files for the OpenEXR image library
 libopenexr23 - runtime files for the OpenEXR image library
 openexr- command-line tools for the OpenEXR image format
 openexr-doc - documentation and examples for the OpenEXR image format
Closes: 909865
Changes:
 openexr (2.3.0-3) experimental; urgency=medium
 .
   * Make sure to use float-store when compiling tests. Closes: #909865
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Processed: Bug #912231 in bnd marked as pending

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #912231 [src:bnd] bnd: FTBFS with Java 11 due to conflict with 
OutputStream.nullOutputStream()
Added tag(s) pending.

-- 
912231: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912231
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#912231: bnd FTBFS with OpenJDK 11

2018-12-19 Thread Emmanuel Bourg
Le 29/10/2018 à 23:32, Markus Koschany a écrit :
> The OpenJDK 11 issue is rather simple to fix, however the build fails
> later on with this error message, a Gradle issue?

I've figured out what is causing the second issue, the poms are
installed into .gradle/daemon/4.4.1/debian/.m2/ instead of debian/.m2/.

Due to the way gradle-debian-helper 2.0.1 injects its code in the Gradle
classpath the Gradle daemon is always started, and the daemon uses a
different working directory (.gradle/daemon/4.4.1/). Since the location
of the Maven repository where the artifacts are installed is specified
as a relative path, it's shifted under the daemon working directory and
maven-repo-helper no longer finds the artifacts at the expected path.

This can be fixed by setting the repository location with an absolute
path (the HOME variable in debian/rules).

Emmanuel Bourg



Bug#916800: marked as done (phybin: FTBFS with newer GHC)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 21:19:25 +
with message-id 
and subject line Bug#916800: fixed in phybin 0.3-3
has caused the Debian Bug report #916800,
regarding phybin: FTBFS with newer GHC
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916800: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916800
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: phybin
Version: 0.3-2
Severity: serious
Justification: fails to build from source (but built successfully in the past)

Dear maintainer,

phybin FTBFS with newer versions of GHC (>= 8.4) with the following error:

[1 of 9] Compiling Bio.Phylogeny.PhyBin.CoreTypes ( 
Bio/Phylogeny/PhyBin/CoreTypes.hs, 
dist-ghc/build/test-phybin/test-phybin-tmp/Bio/Phylogeny/PhyBin/CoreTypes.o )

Bio/Phylogeny/PhyBin/CoreTypes.hs:112:35: error:
Ambiguous occurrence `<>'
It could refer to either `Prelude.<>',
 imported from 
`Prelude' at Bio/Phylogeny/PhyBin/CoreTypes.hs:7:8-37
 (and 
originally defined in `GHC.Base')
  or 
`Text.PrettyPrint.HughesPJClass.<>',
 imported from 
`Text.PrettyPrint.HughesPJClass' at Bio/Phylogeny/PhyBin/CoreTypes.hs:40:1-58
 (and 
originally defined in `pretty-1.1.3.6:Text.PrettyPrint.HughesPJ')
|
112 | displayDefaultTree orig = loop tr <> ";"
|   ^^

Bio/Phylogeny/PhyBin/CoreTypes.hs:120:27: error:
Ambiguous occurrence `<>'
It could refer to either `Prelude.<>',
 imported from 
`Prelude' at Bio/Phylogeny/PhyBin/CoreTypes.hs:7:8-37
 (and 
originally defined in `GHC.Base')
  or 
`Text.PrettyPrint.HughesPJClass.<>',
 imported from 
`Text.PrettyPrint.HughesPJClass' at Bio/Phylogeny/PhyBin/CoreTypes.hs:40:1-58
 (and 
originally defined in `pretty-1.1.3.6:Text.PrettyPrint.HughesPJ')
|
120 |  Just val -> base <> text ":[" <> text (show val) <> text 
"]"
|   ^^

Bio/Phylogeny/PhyBin/CoreTypes.hs:120:40: error:
Ambiguous occurrence `<>'
It could refer to either `Prelude.<>',
 imported from 
`Prelude' at Bio/Phylogeny/PhyBin/CoreTypes.hs:7:8-37
 (and 
originally defined in `GHC.Base')
  or 
`Text.PrettyPrint.HughesPJClass.<>',
 imported from 
`Text.PrettyPrint.HughesPJClass' at Bio/Phylogeny/PhyBin/CoreTypes.hs:40:1-58
 (and 
originally defined in `pretty-1.1.3.6:Text.PrettyPrint.HughesPJ')
|
120 |  Just val -> base <> text ":[" <> text (show val) <> text 
"]"
|^^

Bio/Phylogeny/PhyBin/CoreTypes.hs:120:59: error:
Ambiguous occurrence `<>'
It could refer to either `Prelude.<>',
 imported from 
`Prelude' at Bio/Phylogeny/PhyBin/CoreTypes.hs:7:8-37
 (and 
originally defined in `GHC.Base')
  or 
`Text.PrettyPrint.HughesPJClass.<>',
 imported from 
`Text.PrettyPrint.HughesPJClass' at Bio/Phylogeny/PhyBin/CoreTypes.hs:40:1-58
 (and 
originally defined in `pretty-1.1.3.6:Text.PrettyPrint.HughesPJ')
|
120 |  Just val -> base <> text ":[" <> text (show val) <> text 
"]"
|   ^^


Bug#916800: phybin: FTBFS with newer GHC

2018-12-19 Thread Andreas Tille
Hi Joachim,

On Wed, Dec 19, 2018 at 06:11:40PM +0100, Joachim Breitner wrote:
> > On Tue, Dec 18, 2018 at 10:57:15PM +0100, Joachim Breitner wrote:
> > > Would not be hard to fix, but is there a chance that upstream could just 
> > > release a version that works with a current compiler?
> > 
> > I'm afraid upstream is not very active but would be happy about a patch.
> 
> I submitted a patch to upstream, feel fee to get it from github if you
> need it earlier:
> https://github.com/rrnewton/PhyBin/pull/13
> 
> https://patch-diff.githubusercontent.com/raw/rrnewton/PhyBin/pull/13.patch

I've applied it (with slight change that was needed) as quilt
patch.  Thanks a lot.

Kind regards

   Andreas.

-- 
http://fam-tille.de



Bug#913843: [DRE-maint] Bug#913843: ruby-mail-gpg FTBFS with gpgme 1.12.0

2018-12-19 Thread Georg Faerber
Control: severity -1 important

Will take care of this (non-critical) bug at the end of January; I'm
currently on travel. Up until then, downgrading the severity to prevent
autoremoval.

Cheers,
Georg


signature.asc
Description: Digital signature


Processed: Re: [DRE-maint] Bug#913843: ruby-mail-gpg FTBFS with gpgme 1.12.0

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 important
Bug #913843 [src:ruby-mail-gpg] ruby-mail-gpg FTBFS with gpgme 1.12.0
Severity set to 'important' from 'serious'

-- 
913843: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913843
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916879: qtox: missing library libsodium.so.18

2018-12-19 Thread Christian Weinz
Package: qtox
Version: 1.16.3-1
Severity: serious
Justification: Policy 3.5

Dear Maintainer,

when trying to start qtox it fails with a missing shared library:

qtox: error while loading shared libraries: libsodium.so.18: cannot open shared 
object file: No such file or directory


-- System Information:
Debian Release: buster/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'testing')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), 
LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages qtox depends on:
ii  libavcodec587:4.0.3-1
ii  libavdevice58   7:4.0.3-1
ii  libavformat58   7:4.0.3-1
ii  libavutil56 7:4.0.3-1
ii  libc6   2.28-3
ii  libcairo2   1.16.0-1
ii  libexif12   0.6.21-5
ii  libgdk-pixbuf2.0-0  2.38.0+dfsg-6
ii  libglib2.0-02.58.1-2
ii  libgtk2.0-0 2.24.32-3
ii  libopenal1  1:1.19.1-1
ii  libqrencode44.0.2-1
ii  libqt5core5a5.11.2+dfsg-7
ii  libqt5gui5  5.11.2+dfsg-7
ii  libqt5network5  5.11.2+dfsg-7
ii  libqt5svg5  5.11.2-2
ii  libqt5widgets5  5.11.2+dfsg-7
ii  libqt5xml5  5.11.2+dfsg-7
ii  libsodium23 1.0.16-2
ii  libsqlcipher0   3.4.1-1+b1
ii  libstdc++6  8.2.0-13
ii  libswscale5 7:4.0.3-1
ii  libtoxcore2 0.2.8-1
ii  libx11-62:1.6.7-1
ii  libxss1 1:1.2.3-1

qtox recommends no packages.

qtox suggests no packages.

-- no debconf information



Bug#893409: pixelmed FTBFS with openjdk-9

2018-12-19 Thread Andreas Tille
Hi Olivier,

On Wed, Dec 19, 2018 at 06:37:04PM +0100, Olivier Sallou wrote:
> >> Adding this lib to deps should fix the pb
> 
> - I have fixed the problem, updating patch (lib needed to be added to
> other Makefile)

Cool!  Thanks a lot for your work.  Its really appreciated.
 
> - There were some other issues with an old jdk package moved to an other
> location, from JDK 9 in 2016, which is not exported [0]. Surprisingly it
> compiles anyway, but does it work as expected??

I have no idea at all.  I do not even have an expectation what the
program should do.  I simply inherited the maintenance from Mathieu
Malaterre who injected a lot of medical imaging stuff and decided to
leave the team later.  The package has quite a number of users (compared
to other specialised software) - so I expect users to report issues if
it does not work.

> It seems there is a
> new API (java.lang.ref.Cleaner) but I'm not sure it could be replaced as
> easily (and without knowing side effects), it should be updated by upstream

Upstream is dead.
 
> In the meanwhile I renamed the related package in patch.
> 
> - vecmath needed to be added as well in Makefile (done)
> 
> - javadoc generation classpath needed to be updated as well (done)
> 
> - I think that vecmath and jaxb-api jars will need to be added in
> runtime classpath (debian/DicomXX etc..) as well   (NOT done)
> 
> - 4 tests are failing (surprisingly, packaging continues)
> 
> - lintian: some errors, documentation is not in correct directory
> (libpixelmed-java-doc expects files in
> /usr/share/doc/libpixelmed-java-doc but doc is in
> /usr/share/doc/libpixelmed-java) (NOT fixed)

The latter is caused by the debhelper switch.  I'll care for this.
 
> I have pushed my updates to git (file not found , certainly a result not
> generated, but no additional info)

Thanks again.  I'll have a look tomorrow and will ask back in case
of further issues.
 
Kind regards

  Andreas.

 
> [0] https://bugs.java.com/bugdatabase/view_bug.do?bug_id=8148117

-- 
http://fam-tille.de



Bug#916846: [libreoffice-ogltrans] Blank screen with OpenGL transitions

2018-12-19 Thread Rene Engelhard
Hi,

On Wed, Dec 19, 2018 at 10:04:34PM +0300, Alexander Kernozhitsky wrote:
> > So it probably some system library at fault. Or some integration, though
> > apparently it happens with both gtk3 and "gen"... In both cases that is
> > still a upstream bug (, too).
> 
> Please read the upstream bug report carefully. It's said there that the fault 

I read it. LO upstream is quite fast on blaming upstream bugs to
distributions if it doesn't work on their shipped binaries - even if it
was a bug in their code only exhibiting on newer systems with newer
libs.

> is in Debian version of LibreOffice, official LibreOffice debs work fine on 
> Debian. So, LibreOffice is at fault, not system libraries.

LO ships all possible (including stuff available on every Linux) libraries 
internally
while we aren't. Including stuff like cairo etc.

And no, I am so not going to use gazillions of (old, (security buggy at
times) internal libraries.

So still, it can be an issue of us using some (newer) system library.

Regards,

Rene



Processed: bug 916846 is forwarded to https://bugs.documentfoundation.org/show_bug.cgi?id=115716

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 916846 https://bugs.documentfoundation.org/show_bug.cgi?id=115716
Bug #916846 [libreoffice-ogltrans] [libreoffice-ogltrans] Blank screen with 
OpenGL transitions
Set Bug forwarded-to-address to 
'https://bugs.documentfoundation.org/show_bug.cgi?id=115716'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
916846: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916846
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915831: [Pkg-zfsonlinux-devel] Bug#915831: zfs init file upgrade

2018-12-19 Thread Petter Reinholdtsen
[Chris Zubrzycki]
> I would like to amend my reply. The files are no longer in the deb,
> however they are still listed by dpkg -L zfsutils-linux. I do not
> understand how the solution to an ordering issue is to remove needed
> init files that have been fought to be included for literally years.

See
https://manpages.debian.org/unstable/dpkg/dpkg-maintscript-helper.1.en.html >
for information on how to remove conffiles.

If the files have incorrect init dependencies and are no longer in the
deb, the only way to update them is to manually edit them or add them
back into the deb.

-- 
Happy hacking
Petter Reinholdtsen



Bug#916855: marked as done (glewlwyd: FTBFS: no dependency information found for /build/ulfius-build/libulfius.so.2.3)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 19:04:16 +
with message-id 
and subject line Bug#916855: fixed in glewlwyd 1.4.9-1
has caused the Debian Bug report #916855,
regarding glewlwyd: FTBFS: no dependency information found for 
/build/ulfius-build/libulfius.so.2.3
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916855: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916855
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: glewlwyd
Version: 1.4.6-3
Severity: serious
Tags: ftbfs

Hi,

On a rebuild against libulfius2.5, your package failed to build:

   dh_shlibdeps -a -O--buildsystem=cmake -O--builddirectory=build
dpkg-shlibdeps: error: no dependency information found for 
/<>/build/ulfius-build/libulfius.so.2.3 (used by 
debian/glewlwyd/usr/bin/glewlwyd)
Hint: check if the library actually comes from a package.
dh_shlibdeps: dpkg-shlibdeps -Tdebian/glewlwyd.substvars 
debian/glewlwyd/usr/bin/glewlwyd returned exit code 25
dh_shlibdeps: Aborting due to earlier error

>From the build log it looks like glewlwyd is building its own (old) version
of libulfius, rather than dynamically linking to the one from the Debian
package.

Full logs: https://buildd.debian.org/status/package.php?p=glewlwyd

Cheers,
Emilio
--- End Message ---
--- Begin Message ---
Source: glewlwyd
Source-Version: 1.4.9-1

We believe that the bug you reported is fixed in the latest version of
glewlwyd, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Nicolas Mora  (supplier of updated glewlwyd package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sat, 15 Dec 2018 12:58:37 -0500
Source: glewlwyd
Binary: glewlwyd glewlwyd-common fonts-glewlwyd
Architecture: source all amd64
Version: 1.4.9-1
Distribution: unstable
Urgency: medium
Maintainer: Debian IoT Maintainers 

Changed-By: Nicolas Mora 
Description:
 fonts-glewlwyd - OAuth2 authentication server providing Json Web Tokens - font 
fil
 glewlwyd   - OAuth2 authentication server providing Json Web Tokens
 glewlwyd-common - OAuth2 authentication server providing Json Web Tokens - 
common f
Closes: 916855
Changes:
 glewlwyd (1.4.9-1) unstable; urgency=medium
 .
   * New upstream release (Closes: #916855)
Checksums-Sha1:
 aba8bc2903a8ee485fcb99a9cee9242644b154a9 2364 glewlwyd_1.4.9-1.dsc
 77215c75af95c3f8cc3b7d23eba0ba763873979b 3420208 glewlwyd_1.4.9.orig.tar.gz
 04feeb270f792126d4afa8b2c3d8aa1a2172722b 665408 glewlwyd_1.4.9-1.debian.tar.xz
 0ffb287e5dd062de83dd88d8830feec55ad50d55 402668 fonts-glewlwyd_1.4.9-1_all.deb
 0825d11d86c99a6e6aa2f22a9d81c89faeea6ab9 1219560 
glewlwyd-common_1.4.9-1_all.deb
 f78d53a5d70c8ba50f27e6d2cf712568addd31ed 240388 
glewlwyd-dbgsym_1.4.9-1_amd64.deb
 2a2c1d87867bd312e86aff0ac6e58ebeda33f620 8346 glewlwyd_1.4.9-1_amd64.buildinfo
 7b0ae0ce0608c6b9a8d0d80eef60387f7a9a240d 121600 glewlwyd_1.4.9-1_amd64.deb
Checksums-Sha256:
 295a8e3cacb65d24fc41118b249bedad3512edbb502299fef0f141408df3ef96 2364 
glewlwyd_1.4.9-1.dsc
 b1f1797e3f306a52d67f00dab35a9ce2929d7f7f565f64117ac7d7b77b1f9e98 3420208 
glewlwyd_1.4.9.orig.tar.gz
 70b3165bb912f4247e20855736ed234898e08bf24e949f1ede6a7bde900ac6cb 665408 
glewlwyd_1.4.9-1.debian.tar.xz
 542f46e300916ce346e5dfa3a52b3d3cddcf98dd259b5dae22abd51e7d04775d 402668 
fonts-glewlwyd_1.4.9-1_all.deb
 6651f997fb8deb564e737c93ce9befccb68b90f3b6ff079bd243f1685675c429 1219560 
glewlwyd-common_1.4.9-1_all.deb
 e33d86bfc41f3346ba7868a031c1b0ec470ffeab7307cff703ac2a222531f77a 240388 
glewlwyd-dbgsym_1.4.9-1_amd64.deb
 cac5e86ba7bfb3f5edac70ba7d1e71666c32ef34efb4624d5e3a172409b1bac9 8346 
glewlwyd_1.4.9-1_amd64.buildinfo
 29c45ce00c3b6b2c8d4e266c217ae44e9af6ae03811155675e979fe5e936eb5f 121600 
glewlwyd_1.4.9-1_amd64.deb
Files:
 4c338b95cbd6bdff5937c8f542b249a3 2364 web optional glewlwyd_1.4.9-1.dsc
 e941f5a92f51be42384210136c71cf48 3420208 web optional 
glewlwyd_1.4.9.orig.tar.gz
 d7ef4f360070c12d3c10eb9b2cb2f9c5 665408 web optional 
glewlwyd_1.4.9-1.debian.tar.xz
 59b9dc25c7cf7d1193d6f272426e3abf 402668 fonts optional 
fonts-glewlwyd_1.4.9-1_all.deb
 74311076222c0391be0bf1166a18f1cb 

Bug#916873: python-twisted-core: Incorrect versioned dependency on python-attr

2018-12-19 Thread Kurt Roeckx
Package: python-twisted-core
Version: 18.7.0-2~bpo9+1
Severity: serious

Hi,

With python-twisted-core and python-attr 16.3.0-1, I get the
following error:
[...]
  File "/usr/lib/python2.7/dist-packages/twisted/web/http.py", line 100, in 

from twisted.internet import interfaces, protocol, address
  File "/usr/lib/python2.7/dist-packages/twisted/internet/address.py", line 23, 
in 
class IPv4Address(object):
  File "/usr/lib/python2.7/dist-packages/twisted/internet/address.py", line 37, 
in IPv4Address
type = attr.ib(validator=attr.validators.in_(["TCP", "UDP"]))
AttributeError: 'module' object has no attribute 'in_'

Upgrading python-attr to the version from backports (17.4.0-2~bpo9+1) works.


Kurt



Bug#916781: marked as done (slack-desktop: Segmentation fault)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 20:57:57 +0200
with message-id <20181219185757.GC20084@localhost>
and subject line Re: Bug#916781: slack-desktop: Segmentation fault
has caused the Debian Bug report #916781,
regarding slack-desktop: Segmentation fault
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916781: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916781
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: slack-desktop
Version: 3.3.3
Severity: grave
Justification: renders package unusable

Dear Maintainer,

   When trying to run slack I recive a segmentation fault.
   It seems to be related to libnode. I ran valgrind slack and get:
==14607== Process terminating with default action of signal 11 (SIGSEGV)
==14607==  Bad permissions for mapped region at address 0xDBF060
==14607==at 0xDBF060: ??? (in /usr/lib/slack/slack)
==14607==by 0x710F071: 
node::http2::Http2Session::Callbacks::Callbacks(bool) (in 
/usr/lib/slack/libnode.so)
==14607==by 0x710F134: ??? (in /usr/lib/slack/libnode.so)
==14607==by 0x5853399: call_init.part.0 (dl-init.c:72)
==14607==by 0x5853495: call_init (dl-init.c:118)
==14607==by 0x5853495: _dl_init (dl-init.c:119)
==14607==by 0x58450C9: ??? (in /lib/x86_64-linux-gnu/ld-2.28.so)




-- System Information:
Debian Release: buster/sid
  APT prefers testing
  APT policy: (500, 'testing'), (2, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.18.0-3-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE= 
(charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages slack-desktop depends on:
pn  apt-transport-https  
ii  gconf-service3.2.6-5
ii  gconf2   3.2.6-5
ii  gvfs-bin 1.38.1-1
ii  libappindicator1 0.4.92-7
ii  libcurl4 7.62.0-1
ii  libgcrypt20  1.8.4-4
ii  libgtk2.0-0  2.24.32-3
ii  libnotify4   0.7.7-3
ii  libnss3  2:3.41-1
ii  libsecret-1-00.18.6-3
ii  libudev1 239-15
ii  libxss1  1:1.2.3-1
ii  libxtst6 2:1.2.3-1
ii  python   2.7.15-3
ii  xdg-utils1.1.3-1

slack-desktop recommends no packages.

slack-desktop suggests no packages.

-- debconf-show failed
--- End Message ---
--- Begin Message ---
On Tue, Dec 18, 2018 at 09:39:17AM -0500, Eric Taylor wrote:
> Package: slack-desktop
> Version: 3.3.3
> Severity: grave
> Justification: renders package unusable
>...

There is no package slack-desktop in Debian,
please report the problem to the provider of this package.

cu
Adrian

-- 

   "Is there not promise of rain?" Ling Tan asked suddenly out
of the darkness. There had been need of rain for many days.
   "Only a promise," Lao Er said.
   Pearl S. Buck - Dragon Seed--- End Message ---


Bug#916768: marked as done (libelogind-dev-doc: missing Breaks+Replaces: libelogind-dev (<< 239.1+20181115-1))

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 18:53:41 +
with message-id <20181219185340.ga10...@hindley.org.uk>
and subject line Re: Bug#916768: libelogind-dev-doc: missing Breaks+Replaces: 
libelogind-dev (<< 239.1+20181115-1)
has caused the Debian Bug report #916768,
regarding libelogind-dev-doc: missing Breaks+Replaces: libelogind-dev (<< 
239.1+20181115-1)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916768: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916768
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libelogind-dev-doc
Version: 239.3-3+debian1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libelogind-dev-doc_239.3-3+debian1_all.deb ...
  Unpacking libelogind-dev-doc (239.3-3+debian1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libelogind-dev-doc_239.3-3+debian1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/sd-bus.3.gz', which is also in 
package libelogind-dev:amd64 239.1+20181112+gd4a3f291e395+nosubmodule-1+debian1
  dpkg-deb: error: paste subprocess was killed by signal (Broken pipe)
  Errors were encountered while processing:
   /var/cache/apt/archives/libelogind-dev-doc_239.3-3+debian1_all.deb


cheers,

Andreas

PS: please use a normal debian revision in the version, i.e. only number


libelogind-dev=239.1+20181112+gd4a3f291e395+nosubmodule-1+debian1_libelogind-dev-doc=239.3-3+debian1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Package: elogind
Version: 239.3-4+debian1--- End Message ---


Bug#916855: [Debian-iot-maintainers] Bug#916855: glewlwyd: FTBFS: no dependency information found for /build/ulfius-build/libulfius.so.2.3

2018-12-19 Thread Nicolas Mora

Hello,

Thanks for the report.
It's due to a change in the librairies header files recently. This 
change is incompatible with older glewlwyd cmake scripts.


Glewlwyd 1.4.9 fixes that and the package will be uploaded soon.



Bug#916768: marked as done (libelogind-dev-doc: missing Breaks+Replaces: libelogind-dev (<< 239.1+20181115-1))

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 18:29:30 +
with message-id <20181219182930.ga9...@hindley.org.uk>
and subject line Re: Bug#916768: libelogind-dev-doc: missing Breaks+Replaces: 
libelogind-dev (<< 239.1+20181115-1)
has caused the Debian Bug report #916768,
regarding libelogind-dev-doc: missing Breaks+Replaces: libelogind-dev (<< 
239.1+20181115-1)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916768: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916768
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libelogind-dev-doc
Version: 239.3-3+debian1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libelogind-dev-doc_239.3-3+debian1_all.deb ...
  Unpacking libelogind-dev-doc (239.3-3+debian1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libelogind-dev-doc_239.3-3+debian1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/sd-bus.3.gz', which is also in 
package libelogind-dev:amd64 239.1+20181112+gd4a3f291e395+nosubmodule-1+debian1
  dpkg-deb: error: paste subprocess was killed by signal (Broken pipe)
  Errors were encountered while processing:
   /var/cache/apt/archives/libelogind-dev-doc_239.3-3+debian1_all.deb


cheers,

Andreas

PS: please use a normal debian revision in the version, i.e. only number


libelogind-dev=239.1+20181112+gd4a3f291e395+nosubmodule-1+debian1_libelogind-dev-doc=239.3-3+debian1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Package: libelogind-dev-doc
Version: 239.3-4+debian1

Closing manually as upload had typo in bug number.

Sorry.

Mark--- End Message ---


Processed: found 909385 in 8.2.0b-1, found 909383 in 1:6.1.3-2

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> found 909385 8.2.0b-1
Bug #909385 [vm] vm: fails to install with xemacs21
Marked as found in versions vm/8.2.0b-1.
> found 909383 1:6.1.3-2
Bug #909383 [python-mode] python-mode: fails to install with xemacs21
Marked as found in versions python-mode/1:6.1.3-2.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
909383: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=909383
909385: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=909385
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#896025: Segfault in test suite of new upstream version (Was: python-mne FTBFS with python-matplotlib 2.2.2-1)

2018-12-19 Thread Yaroslav Halchenko
Dear Andreas

Thank you for taking a stab at this!  I will try to not forget to look
at it tomorrow (need to meet some other deadlines today).  If you had a
chance to try figuring out in what part segfault happens (I would just
strace -f -o /tmp/strace.log python -m pytest ...) it might give a clue.
Might as well be an xvfb issue

On Wed, 19 Dec 2018, Andreas Tille wrote:

> Control: tags -1 help
> Control: tags -1 upstream
> Control: forwarded -1 https://github.com/mne-tools/mne-python/issues/5806

> Hi,

> it seems the matplotlib issue reported here is solved in the last
> upstream version which I commited to packaging Git[1].  Unfortunately
> there is another issue which I reported upstream[2]:

> ...
> make[1]: Entering directory '/build/python-mne-0.17+dfsg'
> mkdir -p build
> HOME=/build/python-mne-0.17+dfsg/build \
> MNE_DONTWRITE_HOME=true MNE_SKIP_SAMPLE_DATASET_TESTS=true 
> MNE_FORCE_SERIAL=true MNE_SKIP_NETWORK_TESTS=1 \
>   xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac 
> +extension GLX +render -noreset" \
>   py.test -s -v mne
> = test session starts 
> ==
> platform linux2 -- Python 2.7.15+, pytest-3.10.1, py-1.7.0, pluggy-0.8.0 
> -- /usr/bin/python2
> cachedir: .pytest_cache
> rootdir: /build/python-mne-0.17+dfsg, inifile: setup.cfg
> plugins: cov-2.6.0
> collecting ... Using default location ~/mne_data for testing...
> Creating ~/mne_data
> Using default location ~/mne_data for testing...
> Using default location ~/mne_data for testing...
> ...
> Using default location ~/mne_data for testing...
> Using default location ~/mne_data for testing...
> Segmentation fault
> make[1]: *** [debian/rules:26: override_dh_auto_test] Error 139
> make[1]: Leaving directory '/build/python-mne-0.17+dfsg'


> I wonder whether one of the Uploaders (in CC) will be able to
> fix this since I feel absolutely incompetent to solve this.

> Kind regards

>Andreas.


> [1] https://salsa.debian.org/med-team/python-mne
> [2] https://github.com/mne-tools/mne-python/issues/5806
-- 
Yaroslav O. Halchenko
Center for Open Neuroscience http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834   Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik



Processed: Re: Bug#916846: [libreoffice-ogltrans] Blank screen with OpenGL transitions

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> found 916846 1:6.0.1-1
Bug #916846 [libreoffice-ogltrans] [libreoffice-ogltrans] Blank screen with 
OpenGL transitions
Marked as found in versions libreoffice/1:6.0.1-1.
> tag 916846 + confirmed
Bug #916846 [libreoffice-ogltrans] [libreoffice-ogltrans] Blank screen with 
OpenGL transitions
Added tag(s) confirmed.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
916846: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916846
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916846: [libreoffice-ogltrans] Blank screen with OpenGL transitions

2018-12-19 Thread Rene Engelhard
found 916846 1:6.0.1-1
tag 916846 + confirmed
thanks

Hi,

On Wed, Dec 19, 2018 at 04:51:58PM +0300, Alexander Kernozhitsky wrote:
> Package: libreoffice-ogltrans
[...]
> Severity: grave
> Justification: renders package unusable

Sigh. And "just" becaus it's in an own package and that packages solely
purpose is this...  :(

> When I try to use OpenGL transitions in LibreOffice Impress, I get a bank 
> screen for several seconds instead of a transition. This issue seems to be 
  ^^
  OpenGL, so 3D, so slow(er) :)

> Debian-specific; I was trying the upstream version and it works fine.

And when the actual transition should happen I get "blurry" stuff until
the next slide is there. So yes, confirmed :-(

> Hardware acceleration is enabled in configuration; renderer I use is

Which does not do what you think it does. It does not to "hardware
acceleration" in the first place. It afaicr is "Use cairo".

> Mesa DRI Intel(R) HD Graphics 620 (Kaby Lake GT2)

00:02.0 VGA compatible controller: Intel Corporation 4th Gen Core Processor 
Integrated Graphics Controller (rev 06) (prog-if 00 [VGA controller])

here, whatever that is exactly :-)

> Upstream bug report:
> https://bugs.documentfoundation.org/show_bug.cgi?id=115716

Ah, so since 6.0.1? If you know such stuff, please mark it correctly...

That said, we don't patch OpenGL parts or parts which could possibly
affect it and don't do a "custom" splitout of this either...

So it probably some system library at fault. Or some integration, though
apparently it happens with both gtk3 and "gen"... In both cases that is
still a upstream bug (, too).

Maybe we should just stop shipping them, no one needs it.

Regards,

Rene



Bug#915831: [Pkg-zfsonlinux-devel] Bug#915831: zfs init file upgrade

2018-12-19 Thread Aron Xu
On Thu, Dec 20, 2018 at 1:15 AM Chris Zubrzycki  wrote:
>
> I would like to amend my reply. The files are no longer in the deb, however 
> they are still listed by dpkg -L zfsutils-linux. I do not understand how the 
> solution to an ordering issue is to remove needed init files that have been 
> fought to be included for literally years.
>

The init.d scripts are not present in zfsutils-linux/0.7.12-1~bpo9+1,
see: https://packages.debian.org/stretch-backports/amd64/zfsutils-linux/filelist

Literal reasons about whether init.d scripts should be included in
stretch-backports version do not make sense to such a serious storage
package, which may cause interruptions (or data loss in extreme
situation) when unexpected conditions occur. I'm temped to not ship
init.d scripts for Buster if there is any important issue open when
freeze approaches (e.g. bug #915831).

It's not a fight for any literal reason about init.d scripts but I
don't want to ship something known to be breaking existing stuff, also
I wish the package behaves (almost) identically on all supported init
(systemd, sysv/insserv, sysv/openrc, if desired). Because I don't have
an enterprise environment to battle test these stuff, I can't promise
to test and fix issues in non-stable branches. Stable branches I
consider are: stable, stable-bpo, oldstable-bpo{,-sloppy}.

Let me clarify about what is needed: please anyone interested, step in
and take care of init.d scripts by upstreaming any changes needed,
also make sure to test them extensively and continuously. I'm happy to
apply init.d changes ack'ed by upstream, but will discard any
non-trivial feature-wise debian change (i.e. the OpenRC patch).

Regards,
Aron



Bug#893409: pixelmed FTBFS with openjdk-9

2018-12-19 Thread Olivier Sallou


On 12/19/18 11:46 AM, Andreas Tille wrote:
> Hi,
>
> On Wed, Dec 19, 2018 at 10:39:55AM +0100, Olivier Sallou wrote:
>>> The missing class is in libjaxb-api-java. Just make sure it's on the
>>> CLASSPATH.
>> yeap, an other issue at java migration to openjdk 10/11
>>
>> Adding this lib to deps should fix the pb

- I have fixed the problem, updating patch (lib needed to be added to
other Makefile)

- There were some other issues with an old jdk package moved to an other
location, from JDK 9 in 2016, which is not exported [0]. Surprisingly it
compiles anyway, but does it work as expected?? It seems there is a
new API (java.lang.ref.Cleaner) but I'm not sure it could be replaced as
easily (and without knowing side effects), it should be updated by upstream

In the meanwhile I renamed the related package in patch.

- vecmath needed to be added as well in Makefile (done)

- javadoc generation classpath needed to be updated as well (done)

- I think that vecmath and jaxb-api jars will need to be added in
runtime classpath (debian/DicomXX etc..) as well   (NOT done)

- 4 tests are failing (surprisingly, packaging continues)

- lintian: some errors, documentation is not in correct directory
(libpixelmed-java-doc expects files in
/usr/share/doc/libpixelmed-java-doc but doc is in
/usr/share/doc/libpixelmed-java) (NOT fixed)



I have pushed my updates to git (file not found , certainly a result not
generated, but no additional info)


[0] https://bugs.java.com/bugdatabase/view_bug.do?bug_id=8148117

Olivier

> Thanks for the quick help.  I tried:
>
>
> diff --git a/debian/control b/debian/control
> index e0548ee..3f8b86c 100644
> --- a/debian/control
> +++ b/debian/control
> @@ -14,7 +14,8 @@ Build-Depends-Indep: default-jdk,
>   libjmdns-java,
>   libvecmath-java,
>   libpixelmed-codec-java,
> - libjsonp-java
> + libjsonp-java,
> + libjaxb-api-java
>  Standards-Version: 4.2.1
>  Vcs-Browser: https://salsa.debian.org/med-team/pixelmed
>  Vcs-Git: https://salsa.debian.org/med-team/pixelmed.git
> diff --git a/debian/patches/fixdoc.patch b/debian/patches/fixdoc.patch
> index 752b78c..1737f5f 100644
> --- a/debian/patches/fixdoc.patch
> +++ b/debian/patches/fixdoc.patch
> @@ -11,7 +11,7 @@ Index: pixelmed-20140326/Makefile
> rm -rf docs/javadoc
> javadoc \
>  -  -classpath 
> .:lib/additional/excalibur-bzip2-1.0.jar:lib/additional/hsqldb.jar:lib/additional/vecmath1.2-1.14.jar:lib/additional/commons-codec-1.3.jar:lib/additional/commons-net2.jar:lib/additional/jmdns.jar:lib/additional/jpedalSTD.jar:lib/junit/junit-4.8.1.jar
>  \
> -+  -classpath 
> .:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar
>  \
> ++  -classpath 
> .:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar:/usr/share/java/jaxb-api.jar
>  \
> -link http://download.oracle.com/javase/1.5.0/docs/api/ \
> -link http://jpedal.org/javadoc/ \
> -link http://www.hsqldb.org/doc/src/ \
> diff --git a/debian/patches/jaxb-api.patch b/debian/patches/jaxb-api.patch
> new file mode 100644
> index 000..85760dd
> --- /dev/null
> +++ b/debian/patches/jaxb-api.patch
> @@ -0,0 +1,16 @@
> +Description: For OpenJDK 11 jaxb needs to be in classpath
> +Bug-Debian: https://bugs.debian.org/893409
> +Author: Andreas Tille 
> +Last-Update: Wed, 19 Dec 2018 08:53:43 +0100
> +
> +--- a/Makefile.common.mk
>  b/Makefile.common.mk
> +@@ -65,7 +65,7 @@ JAVACOPTIONS = -O ${JAVACTARGETOPTIONS}
> + 
> + .java.class:
> +   export JAVAVERSIONTARGETJARFILE=${JAVA_HOME}/jre/lib/rt.jar; javac 
> ${JAVACOPTIONS} \
> +-  -classpath 
> ${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}
>  \
> ++  -classpath 
> ${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}:/usr/share/java/jaxb-api.jar
>  \
> +   -sourcepath ${PATHTOROOT} $<
> + 
> + .png.ico:
> diff --git a/debian/patches/series b/debian/patches/series
> index 10286d4..6abfc45 100644
> --- a/debian/patches/series
> +++ b/debian/patches/series
> @@ -16,3 +16,4 @@ set_java_home.patch
>  imageio.patch
>  no_Xdiags_verbose.patch
>  do_not_set_bootclasspath.patch
> +jaxb-api.patch
>
>
>
> I've pushed these changes but unfortunately it does not help. :-(
>
> Any further hints?
>
> Kind regards
>
>   Andreas.
>
>
-- 
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE

Bug#916800: phybin: FTBFS with newer GHC

2018-12-19 Thread Joachim Breitner
Hi,

Am Dienstag, den 18.12.2018, 23:35 +0100 schrieb Andreas Tille:
> Hi Joachim,
> 
> On Tue, Dec 18, 2018 at 10:57:15PM +0100, Joachim Breitner wrote:
> > Would not be hard to fix, but is there a chance that upstream could just 
> > release a version that works with a current compiler?
> 
> I'm afraid upstream is not very active but would be happy about a patch.

I submitted a patch to upstream, feel fee to get it from github if you
need it earlier:
https://github.com/rrnewton/PhyBin/pull/13

https://patch-diff.githubusercontent.com/raw/rrnewton/PhyBin/pull/13.patch

Cheers,
Joachim
-- 
Joachim “nomeata” Breitner • nome...@debian.org • https://j.oach.im/
  


signature.asc
Description: This is a digitally signed message part


Bug#915831: zfs init file upgrade

2018-12-19 Thread Chris Zubrzycki
I would like to amend my reply. The files are no longer in the deb, however 
they are still listed by dpkg -L zfsutils-linux. I do not understand how the 
solution to an ordering issue is to remove needed init files that have been 
fought to be included for literally years.



Bug#916778: marked as done (cylc: FTBFS when built with dpkg-buildpackage -A)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 17:04:13 +
with message-id 
and subject line Bug#916778: fixed in cylc 7.8.0-4
has caused the Debian Bug report #916778,
regarding cylc: FTBFS when built with dpkg-buildpackage -A
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916778: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916778
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:cylc
Version: 7.8.0-3
Severity: serious
Tags: ftbfs

Dear maintainer:

I tried to build this package in buster with dpkg-buildpackage -A but it failed:


[...]
dh  binary-indep --with python2
   dh_testroot -i
   dh_prep -i
   dh_installdirs -i
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<>'
# Don't support gpanel. Requires gnome2's gnomeapplet.
rm -rf  bin/cylc-gpanel conf/gpanel
mkdir -p debian/tmp/usr/bin
mkdir -p debian/tmp/etc/cylc/gcylcrc
cp bin/cylc debian/tmp/usr//bin/cylc
cp etc/gcylc.rc.eg debian/tmp/etc/cylc/gcylcrc/gcylc.rc
cp etc/global-tests.rc.eg debian/tmp/etc/cylc/gcylcrc/global-tests.rx
cp etc/gcylc-themes.rc debian/tmp/etc/cylc/gcylcrc
find . -name '*.t' -exec chmod +x {} \;
find . -name test_header -exec chmod +x {} \;
chmod +x bin/*
install -d -m 0755 
/<>/debian/cylc-el/usr/share/emacs/site-lisp/cylc
install-m 0644 etc/syntax/cylc-mode.el \
   
/<>/debian/cylc-el/usr/share/emacs/site-lisp/cylc/cylc-mode.el
# Do this part if full build (not just arch-dependent)
make[1]: Leaving directory '/<>'
   dh_install -i
   dh_installdocs -i
   dh_installchangelogs -i
   dh_installexamples -i
dh_installexamples: Cannot find (any matches for) "examples/*" (tried in .)

   dh_python2 -i
E: dh_python2 dh_python2:408: no package to act on (python-foo or one with 
${python:Depends} in Depends)
   dh_perl -i
   dh_link -i
   dh_strip_nondeterminism -i
   dh_compress -i
   debian/rules override_dh_fixperms
make[1]: Entering directory '/<>'
# Delete after install. Use packages instead.
for p in Pyro cherrypy markupsafe jinja2 ; do \
rm -rf debian/python-cylc/usr/lib/python2.7/dist-packages/$p ; \
done
# shipped separately
find debian/python-cylc -name glyphicons-halflings-regular.ttf -delete
find: 'debian/python-cylc': No such file or directory
make[1]: *** [debian/rules:38: override_dh_fixperms] Error 1
make[1]: Leaving directory '/<>'
make: *** [debian/rules:5: binary-indep] Error 2
dpkg-buildpackage: error: fakeroot debian/rules binary-indep subprocess 
returned exit status 2


The usual recipe is to split override_dh_foo into override_dh_foo-arch
and override_dh_foo-indep, but in this case it seems a little bit strange
that you are deleting things in the fixperms target (which is usually
for fixing perms).

Also, please consider uploading in source-only form (dpkg-buildpackage -S)
so that this kind of bugs do not propagate to testing and we have official
build logs for the arch:all autobuilder, currently missing here:

https://buildd.debian.org/status/package.php?p=cylc

Thanks.
--- End Message ---
--- Begin Message ---
Source: cylc
Source-Version: 7.8.0-4

We believe that the bug you reported is fixed in the latest version of
cylc, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Alastair McKinstry  (supplier of updated cylc package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 19 Dec 2018 16:38:19 +
Source: cylc
Binary: cylc python-cylc
Architecture: source all amd64
Version: 7.8.0-4
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry 
Changed-By: Alastair McKinstry 
Description:
 cylc   - Workflow scheduler
 python-cylc - Python libraries for cylc workflow scheduler
Closes: 916778
Changes:
 cylc (7.8.0-4) unstable; urgency=medium
 .
   * Fix FTBFS with -A. Closes: #916778
Checksums-Sha1:
 b3f84f3000f9d1c0d2e935485bd79cab6f367de4 2098 cylc_7.8.0-4.dsc
 d56461586e8d496787d706c62ac26733e480b81d 

Bug#915831: zfs upgrade

2018-12-19 Thread Chris Zubrzycki
I was able to upgrade from 0.7.11 to 0.7.12 without any issues, using 
stretch-backports. Thankfully, the init.d scripts are still there, contrary to 
Aron’s changelog entry.



-chris zubrzycki
- --
PGP ID: 0xA2ABC070
Fingerprint: 26B0 BA6B A409 FA83 42B3  1688 FBF9 8232 A2AB C070


"Sadly, text alone cannot convey the depths of my sarcasm."



Bug#916565: marked as done (libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script subprocess returned error exit status 1)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 16:49:12 +
with message-id 
and subject line Bug#916565: fixed in dh-fortran-mod 0.6
has caused the Debian Bug report #916565,
regarding libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal 
script subprocess returned error exit status 1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916565
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libopenmpi3,openmpi-common,openmpi-doc
Version: 3.1.3-5
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to remove.

>From the attached log (scroll to the bottom...):

  Removing libopenmpi3:amd64 (3.1.3-5) ...
  dpkg: error processing package libopenmpi3:amd64 (--remove):
   installed libopenmpi3:amd64 package post-removal script subprocess returned 
error exit status 1

  Removing openmpi-common (3.1.3-5) ...
  dpkg: error processing package openmpi-common (--remove):
   installed openmpi-common package post-removal script subprocess returned 
error exit status 1

  Removing openmpi-doc (3.1.3-5) ...
  dpkg: error processing package openmpi-doc (--remove):
   installed openmpi-doc package post-removal script subprocess returned error 
exit status 1


cheers,

Andreas


libopenmpi3_3.1.3-5.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: dh-fortran-mod
Source-Version: 0.6

We believe that the bug you reported is fixed in the latest version of
dh-fortran-mod, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Alastair McKinstry  (supplier of updated dh-fortran-mod 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 19 Dec 2018 15:40:05 +
Source: dh-fortran-mod
Binary: dh-fortran-mod
Architecture: source all
Version: 0.6
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Alastair McKinstry 
Description:
 dh-fortran-mod - debhelper add-on to handle Fortran '.mod' files
Closes: 916565
Changes:
 dh-fortran-mod (0.6) unstable; urgency=medium
 .
   * Add spaces into preinst / postrm fragments. Closes: #916565
Checksums-Sha1:
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 e903ae7d0b2e2d55ce3278ea5d73a4fc72b26b22 5199 
dh-fortran-mod_0.6_amd64.buildinfo
Checksums-Sha256:
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dh-fortran-mod_0.6_amd64.buildinfo
Files:
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 92c5676ba344539031863174c8b5794d 6132 devel optional dh-fortran-mod_0.6.tar.xz
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dh-fortran-mod_0.6_amd64.buildinfo

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0ZDqUVUP9LBlXK9PdodJ/8OkplfY8v+ldNJvuan06ey+J139f3q4z6Bk1MQk4h94
l2uR6CbwZq16ZRhgAl/O1poKI6mwIbx77syEw/vN95jEzrWvlfsj9zTqLSAgSnGW
hWBgpZe4GEbLax4x7LfTGd4lSAH7b3T8csD6JBy/i8YIL9J+sPos5/HBuVwG2ztz
Yahcl5w8+DvLK9O7kIK2cIaF8DVmgTLXHCKQzIzhAh2kboWtNheuz5zgd24AZvlQ

Bug#893409: pixelmed FTBFS with openjdk-9

2018-12-19 Thread Olivier Sallou


On 12/19/18 11:46 AM, Andreas Tille wrote:
> Hi,
>
> On Wed, Dec 19, 2018 at 10:39:55AM +0100, Olivier Sallou wrote:
>>> The missing class is in libjaxb-api-java. Just make sure it's on the
>>> CLASSPATH.
>> yeap, an other issue at java migration to openjdk 10/11
>>
>> Adding this lib to deps should fix the pb
> Thanks for the quick help.  I tried:
>
>
> diff --git a/debian/control b/debian/control
> index e0548ee..3f8b86c 100644
> --- a/debian/control
> +++ b/debian/control
> @@ -14,7 +14,8 @@ Build-Depends-Indep: default-jdk,
>   libjmdns-java,
>   libvecmath-java,
>   libpixelmed-codec-java,
> - libjsonp-java
> + libjsonp-java,
> + libjaxb-api-java
>  Standards-Version: 4.2.1
>  Vcs-Browser: https://salsa.debian.org/med-team/pixelmed
>  Vcs-Git: https://salsa.debian.org/med-team/pixelmed.git
> diff --git a/debian/patches/fixdoc.patch b/debian/patches/fixdoc.patch
> index 752b78c..1737f5f 100644
> --- a/debian/patches/fixdoc.patch
> +++ b/debian/patches/fixdoc.patch
> @@ -11,7 +11,7 @@ Index: pixelmed-20140326/Makefile
> rm -rf docs/javadoc
> javadoc \
>  -  -classpath 
> .:lib/additional/excalibur-bzip2-1.0.jar:lib/additional/hsqldb.jar:lib/additional/vecmath1.2-1.14.jar:lib/additional/commons-codec-1.3.jar:lib/additional/commons-net2.jar:lib/additional/jmdns.jar:lib/additional/jpedalSTD.jar:lib/junit/junit-4.8.1.jar
>  \
> -+  -classpath 
> .:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar
>  \
> ++  -classpath 
> .:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar:/usr/share/java/jaxb-api.jar
>  \
> -link http://download.oracle.com/javase/1.5.0/docs/api/ \
> -link http://jpedal.org/javadoc/ \
> -link http://www.hsqldb.org/doc/src/ \
> diff --git a/debian/patches/jaxb-api.patch b/debian/patches/jaxb-api.patch
> new file mode 100644
> index 000..85760dd
> --- /dev/null
> +++ b/debian/patches/jaxb-api.patch
> @@ -0,0 +1,16 @@
> +Description: For OpenJDK 11 jaxb needs to be in classpath
> +Bug-Debian: https://bugs.debian.org/893409
> +Author: Andreas Tille 
> +Last-Update: Wed, 19 Dec 2018 08:53:43 +0100
> +
> +--- a/Makefile.common.mk
>  b/Makefile.common.mk
> +@@ -65,7 +65,7 @@ JAVACOPTIONS = -O ${JAVACTARGETOPTIONS}
> + 
> + .java.class:
> +   export JAVAVERSIONTARGETJARFILE=${JAVA_HOME}/jre/lib/rt.jar; javac 
> ${JAVACOPTIONS} \
> +-  -classpath 
> ${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}
>  \
> ++  -classpath 
> ${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}:/usr/share/java/jaxb-api.jar
>  \
> +   -sourcepath ${PATHTOROOT} $<
> + 
> + .png.ico:
> diff --git a/debian/patches/series b/debian/patches/series
> index 10286d4..6abfc45 100644
> --- a/debian/patches/series
> +++ b/debian/patches/series
> @@ -16,3 +16,4 @@ set_java_home.patch
>  imageio.patch
>  no_Xdiags_verbose.patch
>  do_not_set_bootclasspath.patch
> +jaxb-api.patch
>
>
>
> I've pushed these changes but unfortunately it does not help. :-(


I'm looking at the issue

>
> Any further hints?
>
> Kind regards
>
>   Andreas.
>
>
-- 
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95

gpg key id: 4096R/326D8438  (keyring.debian.org)
Key fingerprint = 5FB4 6F83 D3B9 5204 6335  D26D 78DC 68DB 326D 8438



Bug#916666: marked as done (python-pip's autopkg tests are failing (blocking python3.7))

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 16:04:49 +
with message-id 
and subject line Bug#91: fixed in python-pip 18.1-3
has caused the Debian Bug report #91,
regarding python-pip's autopkg tests are failing (blocking python3.7)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
91: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=91
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:pythonn-pip
Version: 18.1-2
Severity: serious
Tags: sid buster

python-pip's autopkg tests are failing (blocking python3.7):

autopkgtest [14:05:30]:  summary
pip2-root.sh PASS
pip3-root.sh PASS
pip2-user.sh FAIL stderr:   The script world is installed in
'/tmp/autopkgtest-lxc.a8273n4w/downtmp/autopkgtest_tmp/.local/bin' which is not
on PATH.
pip3-user.sh FAIL stderr:   The script world is installed in
'/tmp/autopkgtest-lxc.a8273n4w/downtmp/autopkgtest_tmp/.local/bin' which is not
on PATH.
pip3-editable.sh PASS
--- End Message ---
--- Begin Message ---
Source: python-pip
Source-Version: 18.1-3

We believe that the bug you reported is fixed in the latest version of
python-pip, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andrej Shadura  (supplier of updated python-pip package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Wed, 19 Dec 2018 16:49:19 +0100
Source: python-pip
Binary: python-pip python3-pip python-pip-whl
Architecture: source
Version: 18.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team 

Changed-By: Andrej Shadura 
Description:
 python-pip - Python package installer
 python-pip-whl - Python package installer
 python3-pip - Python package installer
Closes: 91
Changes:
 python-pip (18.1-3) unstable; urgency=medium
 .
   * Add gitlab-ci.yml.
   * Fix autopkgtests (Closes: #91):
 - Add $HOME/.local/bin to PATH to prevent pip’s warnings.
 - Make sure user tests always run as non-root to test that pip
   automatically enables --user.
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Bug#916858: supercollider-emacs: fails to install with xemacs21

2018-12-19 Thread Andreas Beckmann
Package: supercollider-emacs
Version: 1:3.7.0~repack-4
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts
Control: found -1 1:3.6.6~repack-2-1
Control: found -1 1:3.8.0~repack-2

Hi,

during a test with piuparts I noticed your package failed to install. As
per definition of the release team this makes the package too buggy for
a release, thus the severity.

>From the attached log (scroll to the bottom...):

  Setting up supercollider-emacs (1:3.7.0~repack-4) ...
  Install supercollider-emacs for xemacs21
  install/SuperCollider: Handling install for emacsen flavor xemacs21
  Loading /usr/share/emacs/site-lisp/debian-startup...
  Loading 00debian...
  Loading site-start...
  Loading 00debian-vars...
  Loading 50supercollider-emacs...
  Error while loading 50supercollider-emacs: Invalid read syntax: "#"
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-browser.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-browser.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-browser.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-dev.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-dev.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-dev.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-document.el...
  Wrote /usr/share/xemacs21/site-lisp/SuperCollider/sclang-document.elc
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-help.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-help.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-help.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-interp.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-interp.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-interp.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-keys.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-keys.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-keys.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-language.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-language.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-language.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-menu.el...
  Wrote /usr/share/xemacs21/site-lisp/SuperCollider/sclang-menu.elc
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-minor-mode.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-minor-mode.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-minor-mode.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-mode.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-mode.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-mode.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-server.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-server.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-server.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-util.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-util.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-util.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-vars.el...
  Wrote /usr/share/xemacs21/site-lisp/SuperCollider/sclang-vars.elc
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang-widgets.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang-widgets.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang-widgets.el: 
  Invalid read syntax: "#"
  
  
  Compiling /usr/share/xemacs21/site-lisp/SuperCollider/sclang.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/SuperCollider/sclang.el:
!! Invalid read syntax (("#"))
  >>Error occurred processing sclang.el: 
  Invalid read syntax: "#"
  
  
  Done
  ERROR: install script from supercollider-emacs package failed
  dpkg: error processing package supercollider-emacs (--configure):
   subprocess installed post-installation script returned 

Processed: supercollider-emacs: fails to install with xemacs21

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> found -1 1:3.6.6~repack-2-1
Bug #916858 [supercollider-emacs] supercollider-emacs: fails to install with 
xemacs21
Marked as found in versions supercollider/1:3.6.6~repack-2-1.
> found -1 1:3.8.0~repack-2
Bug #916858 [supercollider-emacs] supercollider-emacs: fails to install with 
xemacs21
Marked as found in versions supercollider/1:3.8.0~repack-2.

-- 
916858: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916858
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915692: debdiff for 915692, 915419

2018-12-19 Thread Luca Boccassi
Dear Maintainer,

In order to allow the DPDK 17.11 -> 18.11 transition to happen [1], I
intend to upload a source NMU fixing 915692 and 915419 (debdiff
attached) either at the end of this week or at the beginning of the
next to DELAYED/1.

I hope this does not cause any troubles, and please let me know if this
would be an issue, and/or if you prefer an alternative solution.

Thank you!

-- 
Kind regards,
Luca Boccassi

[1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916351diff -Nru collectd-5.8.1/debian/changelog collectd-5.8.1/debian/changelog
--- collectd-5.8.1/debian/changelog	2018-11-23 00:01:43.0 +0100
+++ collectd-5.8.1/debian/changelog	2018-12-19 15:52:36.0 +0100
@@ -1,3 +1,15 @@
+collectd (5.8.1-1.1) unstable; urgency=medium
+
+  * Non-maintainer upload.
+  * Stop building lvm plugin and remove dependency from liblvm2-dev,
+which is deprecated.
+(Closes: #915692)
+  * Backport dpdk_configure_check.patch from the upstream 5.8 release
+branch to fix build with DPDK 18.11.
+(Closes: #915419)
+
+ -- Luca Boccassi   Wed, 19 Dec 2018 15:52:36 +0100
+
 collectd (5.8.1-1) unstable; urgency=medium
 
   * New upstream release.
diff -Nru collectd-5.8.1/debian/control collectd-5.8.1/debian/control
--- collectd-5.8.1/debian/control	2018-11-23 00:01:43.0 +0100
+++ collectd-5.8.1/debian/control	2018-12-19 15:51:04.0 +0100
@@ -28,7 +28,6 @@
  libkvm-dev [kfreebsd-any],
  libldap2-dev,
  liblua5.3-dev,
- liblvm2-dev [linux-any],
  libmemcached-dev,
  libmicrohttpd-dev,
  libmodbus-dev,
@@ -156,7 +155,6 @@
* logging to files, STDOUT and STDERR: logfile
* logging in logstash's JSON event format: log_logstash
* embedded Lua interpreter: lua
-   * Logical Volume Manager usage: lvm
* Machine Check Exceptions notifications: mcelog
* Atheros wireless LAN chipset statistics: madwifi
* motherboard monitor: mbmon
diff -Nru collectd-5.8.1/debian/patches/dpdk_configure_check.patch collectd-5.8.1/debian/patches/dpdk_configure_check.patch
--- collectd-5.8.1/debian/patches/dpdk_configure_check.patch	1970-01-01 01:00:00.0 +0100
+++ collectd-5.8.1/debian/patches/dpdk_configure_check.patch	2018-12-19 15:52:03.0 +0100
@@ -0,0 +1,44 @@
+Author: Luca Boccassi 
+Origin: https://github.com/collectd/collectd/commit/b29454cdf22a197924d35bb2da0840df9cbd65f6
+Forwarded: https://github.com/collectd/collectd/pull/3015
+Description: do not use -ldpdk for configure check
+ The AC_CHECK_LIB test runs unconditionally, and fails with DPDK 18.11
+ when built with Meson as there is no longer a libdpdk.so linker script,
+ but only a pkg-config file, so -ldpdk (which is what AC_CHECK_LIB runs)
+ fails.
+ Use AC_LINK_IFELSE instead, with compiler and linker flags set
+ appropriately.
+--- a/configure.ac
 b/configure.ac
+@@ -2380,13 +2380,30 @@ if test "x$with_libdpdk" != "xno"; then
+ fi
+ 
+ if test "x$with_libdpdk" = "xyes"; then
++  SAVE_LIBS="$LIBS"
++  LIBS="$LIBDPDK_LIBS $LIBS"
+   SAVE_LDFLAGS="$LDFLAGS"
+   LDFLAGS="$LIBDPDK_LDFLAGS $LDFLAGS"
+-  AC_CHECK_LIB([dpdk], [rte_eal_init],
++  SAVE_CPPFLAGS="$CPPFLAGS"
++  CPPFLAGS="$LIBDPDK_CPPFLAGS $CPPFLAGS"
++  SAVE_CFLAGS="$CFLAGS"
++  CFLAGS="$LIBDPDK_CFLAGS $CFLAGS"
++  AC_LINK_IFELSE(
++[
++  AC_LANG_PROGRAM(
++[[
++  #include 
++]],
++[[return rte_eal_init(0, NULL);]]
++  )
++],
+ [with_libdpdk="yes"],
+ [with_libdpdk="no (symbol 'rte_eal_init' not found)"]
+   )
++  LIBS="$SAVE_LIBS"
+   LDFLAGS="$SAVE_LDFLAGS"
++  CPPFLAGS="$SAVE_CPPFLAGS"
++  CFLAGS="$SAVE_CFLAGS"
+ fi
+ 
+ # }}}
diff -Nru collectd-5.8.1/debian/patches/series collectd-5.8.1/debian/patches/series
--- collectd-5.8.1/debian/patches/series	2018-11-22 23:22:49.0 +0100
+++ collectd-5.8.1/debian/patches/series	2018-12-19 15:52:28.0 +0100
@@ -4,3 +4,4 @@
 nagios-debian-paths.patch
 i2c_detection.patch
 liblvm2app_depreciation_warning.patch
+dpdk_configure_check.patch
diff -Nru collectd-5.8.1/debian/rules collectd-5.8.1/debian/rules
--- collectd-5.8.1/debian/rules	2018-11-23 00:01:43.0 +0100
+++ collectd-5.8.1/debian/rules	2018-12-19 15:51:28.0 +0100
@@ -96,6 +96,10 @@
 # migrating to testing.
 confflags += --disable-mqtt
 
+# disable lvm plugin, liblvm2app is deprecated upstream, #915692
+# Cf. https://github.com/collectd/collectd/issues/2647
+confflags += --disable-lvm
+
 # These plugins are Linux-specific.
 ifeq ($(DEB_HOST_ARCH_OS),kfreebsd)
 	confflags += \
@@ -109,7 +113,6 @@
 		--disable-ipc \
 		--disable-iptables \
 		--disable-ipvs \
-		--disable-lvm \
 		--disable-madwifi \
 		--disable-md \
 		--disable-netlink \


signature.asc
Description: This is a digitally signed message part


Bug#915171: Upstream ticket

2018-12-19 Thread Aurelien Jarno
control: tag -1 + patch

On 2018-12-19 10:23, Juhani Numminen wrote:
> forwarded 915171 https://github.com/kjn/lbzip2/issues/22
> stop
> 

Note that the patch has been committed a few months ago in the upstream
gnulib repository:

http://git.savannah.gnu.org/cgit/gnulib.git/commit/?id=4af4a4a71827c0bc5e0ec67af23edef4f15cee8e

-- 
Aurelien Jarno  GPG: 4096R/1DDD8C9B
aurel...@aurel32.net http://www.aurel32.net



Bug#916857: el-get: fails to install with xemacs21

2018-12-19 Thread Andreas Beckmann
Package: el-get
Version: 3.1-1.1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package failed to install. As
per definition of the release team this makes the package too buggy for
a release, thus the severity.

>From the attached log (scroll to the bottom...):

[...]
  Selecting previously unselected package el-get.
  (Reading database ... ^M(Reading database ... 5%^M(Reading database ... 
10%^M(Reading database ... 15%^M(Reading database ... 20%^M(Reading database 
... 25%^M(Reading database ... 30%^M(Reading database ... 35%
^M(Reading database ... 40%^M(Reading database ... 45%^M(Reading database ... 
50%^M(Reading database ... 55%^M(Reading database ... 60%^M(Reading database 
... 65%^M(Reading database ... 70%^M(Reading database ...
 75%^M(Reading database ... 80%^M(Reading database ... 85%^M(Reading database 
... 90%^M(Reading database ... 95%^M(Reading database ... 100%^M(Reading 
database ... 13211 files and directories currently installed.
)
  Preparing to unpack .../el-get_3.1-1.1_all.deb ...
  Unpacking el-get (3.1-1.1) ...
  Setting up el-get (3.1-1.1) ...
  ERROR: el-get is broken - called emacs-package-install as a new-style add-on, 
but has no compat file.
  Install el-get for emacs
  Install el-get for xemacs21
  install/el-get: Handling install for emacsen flavor xemacs21
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
[...]
  Loading 00debian...
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Error while loading 00debian: Variable binding depth exceeds max-specpdl-size
  Compiling /usr/share/xemacs21/site-lisp/el-get/el-get.el...
  Ignoring `eval:' in file's local variables
  Ignoring `eval:' in file's local variables
  Ignoring `eval:' in file's local variables
  Ignoring `eval:' in file's local variables
  Loading dired-mule...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/el-get/el-get.el:
!! Wrong number of arguments ((require 3))
  >>Error occurred processing el-get.el: 
  Wrong number of arguments: require, 3
  
  
  Done
  ERROR: install script from el-get package failed
  dpkg: error processing package el-get (--configure):
   installed el-get package post-installation script subprocess returned error 
exit status 1
  Errors were encountered while processing:
   el-get


Cheers,

Andreas


el-get=3.1-1.1_xemacs21.log.gz
Description: application/gzip


Processed: Re: Upstream ticket

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 + patch
Bug #915171 [src:lbzip2] lbzip2 FTBFS with glibc 2.28
Added tag(s) patch.

-- 
915171: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=915171
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915151: gzip FTBFS: ../../lib/fseeko.c:110:4: error: #error "Please port gnulib fseeko.c to your platform! Look at the code in fseeko.c, then report this to bug-gnulib."

2018-12-19 Thread Aurelien Jarno
On 2018-12-06 23:57, Rene Luria wrote:
> Hello,
> 
> On Sat, 1 Dec 2018 08:07:24 +0100 Helmut Grohne  wrote:
> > gzip fails to build from source in unstable (since the glibc upgrade to
> > 2.28):
> 
> (…)
> 
> > gnulib likes to use this construct to detect glibc:
> > 
> > | #if defined _IO_ftrylockfile || __GNU_LIBRARY__ == 1 /* GNU libc, BeOS, 
> > Haiku, Linux libc5 */
> > 
> > Unfortunately, _IO_ftrylockfile got removed from glibc/2.28 and
> > __GNU_LIBRARY__ is 6, so glibc is not a GNU libc.
> > 
> > gnulib has a history of breaking packages frequently. What makes matters
> > worse is that gnulib gets embedded rather than used like any other
> > component. So fixing this bug in gnulib does not fix gzip. I therefore
> > cloned a separate instance as it still breaks e.g. lbzip2.
> 
> Would the here attached patch help ?
> On most files in lib we can use the == 6 construct. Only for fflush.c this 
> can’t be done because it uses removed libio.h references.

I think you should use the patch that has been committed to the upstream
gnulib:

http://git.savannah.gnu.org/cgit/gnulib.git/commit/?id=4af4a4a71827c0bc5e0ec67af23edef4f15cee8e
 
Aurelien

-- 
Aurelien Jarno  GPG: 4096R/1DDD8C9B
aurel...@aurel32.net http://www.aurel32.net



Bug#916565: libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script subprocess returned error exit status 1

2018-12-19 Thread Samuel Thibault
Control: reassign -1 dh-fortran-mod
Control: affects -1 + openmpi
Control: tags -1 + patch

>  rm: cannot remove '/usr/lib/x86_64-linux-gnu/fortran/gfortran-8#': No such 
> file or directory
>  rm: cannot remove 'End': No such file or directory
>  rm: cannot remove 'automatically': No such file or directory
>  rm: cannot remove 'added': No such file or directory
>  rm: cannot remove 'section': No such file or directory

Looking at the postrm script, I see

rmdir --ignore-fail-on-non-empty --parents /usr/lib/$multiarch/fortran/$base
[ -d /usr/lib/$multiarch/fortran/$base ] && rm 
/usr/lib/$multiarch/fortran/$cmplr# End automatically added section

Its seems to be coming from dh-fortran-mod: the postrm-fortran-mod does
not have a \n on the last line. Could you apply the attached patch?
Then we'll have to rebuild openmpi and possibly others with the same
resulting issue.

Samuel
--- postrm-fortran-mod.orig 2018-12-19 16:20:54.080650624 +0100
+++ postrm-fortran-mod  2018-12-19 16:20:57.120660630 +0100
@@ -3,4 +3,4 @@
 cmplr="#FCOMPILER#"
 
 rmdir --ignore-fail-on-non-empty --parents /usr/lib/$multiarch/fortran/$base
-[ -d /usr/lib/$multiarch/fortran/$base ] && rm 
/usr/lib/$multiarch/fortran/$cmplr
\ No newline at end of file
+[ -d /usr/lib/$multiarch/fortran/$base ] && rm 
/usr/lib/$multiarch/fortran/$cmplr


Processed: Re: Bug#916565: libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script subprocess returned error exit status 1

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 dh-fortran-mod
Bug #916565 [libopenmpi3,openmpi-common,openmpi-doc] 
libopenmpi3,openmpi-{common,doc}: fails to remove: post-removal script 
subprocess returned error exit status 1
Bug reassigned from package 'libopenmpi3,openmpi-common,openmpi-doc' to 
'dh-fortran-mod'.
No longer marked as found in versions 3.1.3-5.
Ignoring request to alter fixed versions of bug #916565 to the same values 
previously set
> affects -1 + openmpi
Bug #916565 [dh-fortran-mod] libopenmpi3,openmpi-{common,doc}: fails to remove: 
post-removal script subprocess returned error exit status 1
Added indication that 916565 affects openmpi
> tags -1 + patch
Bug #916565 [dh-fortran-mod] libopenmpi3,openmpi-{common,doc}: fails to remove: 
post-removal script subprocess returned error exit status 1
Added tag(s) patch.

-- 
916565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916565
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#915150: gzip: FTBFS with glibc 2.28

2018-12-19 Thread Aurelien Jarno
On 2018-12-01 16:05, Santiago Vila wrote:
> FWIW: I found a fix for m4 and sharutils in this commit by Paul Eggert:
> 
> https://lists.gnu.org/r/bug-gnulib/2018-03/msg2.html
> 
> Based on the same commit, the attached patch should work for gzip.

This patch has been committed in the upstream gnulib repository, so
it's definitely the right way to fix the bug:

http://git.savannah.gnu.org/cgit/gnulib.git/commit/?id=4af4a4a71827c0bc5e0ec67af23edef4f15cee8e

Aurelien

-- 
Aurelien Jarno  GPG: 4096R/1DDD8C9B
aurel...@aurel32.net http://www.aurel32.net



Bug#916840: marked as done (groovy: FTBFS with Java 11 due to polymorphic signature calls & SecurityManager changes)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 15:20:05 +
with message-id 
and subject line Bug#916840: fixed in groovy 2.4.16-1
has caused the Debian Bug report #916840,
regarding groovy: FTBFS with Java 11 due to polymorphic signature calls & 
SecurityManager changes
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916840: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916840
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:groovy
Version: 2.4.15-3
Severity: serious
User: debian-j...@lists.debian.org
Usertags: default-java11


groovy fails to build with Java 11, there are two different errors.

The first one:

  
groovy-2.4.15/src/main/org/codehaus/groovy/vmplugin/v7/IndyInterface.java:236: 
error: polymorphic signature calls are not supported in -target 1.6
  return call.invokeExact(arguments);
 ^
(use -target 1.7 or higher to enable polymorphic signature calls)


and the second one:

  
groovy-2.4.15/subprojects/groovy-console/src/main/groovy/groovy/ui/text/StructuredSyntaxResources.java:44:
 error: cannot find symbol
  mgr.checkSystemClipboardAccess();
 ^
symbol:   method checkSystemClipboardAccess()
location: variable mgr of type SecurityManager
--- End Message ---
--- Begin Message ---
Source: groovy
Source-Version: 2.4.16-1

We believe that the bug you reported is fixed in the latest version of
groovy, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Emmanuel Bourg  (supplier of updated groovy package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 19 Dec 2018 14:42:03 +0100
Source: groovy
Binary: groovy groovy-doc
Architecture: source
Version: 2.4.16-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Java Maintainers 

Changed-By: Emmanuel Bourg 
Description:
 groovy - Agile dynamic language for the Java Virtual Machine
 groovy-doc - Agile dynamic language for the Java Virtual Machine (documentatio
Closes: 879892 910098 916840
Changes:
 groovy (2.4.16-1) unstable; urgency=medium
 .
   * Team upload
 .
   [ Tiago Stürmer Daitx ]
   * Replace HTTP URLs with local files: (Closes: #910098)
 - debian/control: build depends on -doc packages so javadoc can
   properly link the apis.
 - debian/patches/10_fix_javadoc_links.patch: include javadoc apis
   locally; since openjdk 10 any invalid, unreacheable, or
   nonexistent doc link causes the build to fail.
 .
   [ tony mancill ]
   * Add groovyConsole desktop file. (Closes: #879892)
 Thank you to Dirk Heinrichs for the patch and reminder.
 .
   [ Emmanuel Bourg ]
   * New upstream release
 - Refreshed the patches
 - Updated the poms
   * Fixed the build failure with Java 11 (Closes: #916840)
Checksums-Sha1:
 93e246569c7801ff27d18f3ab4c44937e9932a24 2403 groovy_2.4.16-1.dsc
 1bcbf80223ddd2d4188fd8377e9c40957e47d12a 3039780 groovy_2.4.16.orig.tar.xz
 dc07d2fea208631cf54ac9f5f2eb129e85044376 29044 groovy_2.4.16-1.debian.tar.xz
 2fc3469824fa69d63512d7e6a805b72fc2e72338 14428 groovy_2.4.16-1_source.buildinfo
Checksums-Sha256:
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groovy_2.4.16-1.dsc
 0833e0bdc7222708eb1e4c19a197a66a452e2cfb4f1a4f951a5e80be380fef4f 3039780 
groovy_2.4.16.orig.tar.xz
 556c5b7b816fe80081f5be9ec675aa02109529d775de32f108f9bcfe9691dd8d 29044 
groovy_2.4.16-1.debian.tar.xz
 292884717484ff06a7d6e5f8b9237ea65a1e92f66382448bf04f5000855abfb4 14428 
groovy_2.4.16-1_source.buildinfo
Files:
 eaaf1801c6bf30a4e3d88cd1821cf547 2403 java optional groovy_2.4.16-1.dsc
 187b77ff7bac94e75dbac0977a67478c 3039780 java optional 
groovy_2.4.16.orig.tar.xz
 79d7ae4495becc70213d70a3c7fa15ff 29044 java optional 
groovy_2.4.16-1.debian.tar.xz
 1a8f6babb0c955a9f65fb01bd9f32646 14428 java optional 
groovy_2.4.16-1_source.buildinfo

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Processed: Re: erlang-mode: fails to install with xemacs21

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> notfixed -1 1:20.3.8.5+dfsg-1
Bug #909387 [erlang-mode] erlang-mode: fails to install with xemacs21
No longer marked as fixed in versions erlang/1:20.3.8.5+dfsg-1.
> found -1 1:21.2+dfsg-1
Bug #909387 [erlang-mode] erlang-mode: fails to install with xemacs21
Marked as found in versions erlang/1:21.2+dfsg-1.

-- 
909387: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=909387
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#909387: erlang-mode: fails to install with xemacs21

2018-12-19 Thread Andreas Beckmann
Followup-For: Bug #909387
Control: notfixed -1 1:20.3.8.5+dfsg-1
Control: found -1 1:21.2+dfsg-1

That wasn't working previously in sid, my test was just not running
properly and the package was skipped in sid ...

[...]
  Selecting previously unselected package erlang-mode.
  Preparing to unpack .../erlang-mode_1%3a21.2+dfsg-1_all.deb ...
  Unpacking erlang-mode (1:21.2+dfsg-1) ...
  Setting up erlang-mode (1:21.2+dfsg-1) ...
  Install emacsen-common for xemacs21
  emacsen-common: Handling install of emacsen flavor xemacs21
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
[...]
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Loading site-start...
  Loading /usr/share/emacsen-common/debian-startup...
  Loading 00debian...
  Error while loading 00debian: Variable binding depth exceeds max-specpdl-size
  Compiling /usr/share/xemacs21/site-lisp/debian-startup.el...
  Wrote /usr/share/xemacs21/site-lisp/debian-startup.elc
  Done
  Install erlang-mode for xemacs21
  install/erlang: Handling install for emacsen flavor xemacs21
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang-eunit.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/erlang/erlang-eunit.el:
!! error (("Unknown keyword" :safe))
  >>Error occurred processing erlang-eunit.el: 
  Unknown keyword: :safe
  
  
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang-skels-old.el...
  Wrote /usr/share/xemacs21/site-lisp/erlang/erlang-skels-old.elc
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang-skels.el...
  Wrote /usr/share/xemacs21/site-lisp/erlang/erlang-skels.elc
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang-start.el...
  Wrote /usr/share/xemacs21/site-lisp/erlang/erlang-start.elc
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang-test.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/erlang/erlang-test.el:
!! File error (("Cannot open load file" "ert"))
  >>Error occurred processing erlang-test.el: Cannot open load file: ert
  
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang.el...
  While compiling toplevel forms in file 
/usr/share/xemacs21/site-lisp/erlang/erlang.el:
** Third arg to defvar erlang-font-lock-keywords-1 is not a string: 
erlang-font-lock-descr-string
** Third arg to defvar erlang-font-lock-keywords-2 is not a string: 
erlang-font-lock-descr-string
** Third arg to defvar erlang-font-lock-keywords-3 is not a string: 
erlang-font-lock-descr-string
** Third arg to defvar erlang-font-lock-keywords-4 is not a string: 
erlang-font-lock-descr-string
** Third arg to defvar erlang-font-lock-keywords is not a string: 
erlang-font-lock-descr-string
  Wrote /usr/share/xemacs21/site-lisp/erlang/erlang.elc
  Compiling /usr/share/xemacs21/site-lisp/erlang/erlang_appwiz.el...
  Wrote /usr/share/xemacs21/site-lisp/erlang/erlang_appwiz.elc
  Done
  ERROR: install script from erlang-mode package failed
  dpkg: error processing package erlang-mode (--configure):
   installed erlang-mode package post-installation script subprocess returned 
error exit status 1
  Errors were encountered while processing:
   erlang-mode


Andreas


erlang-mode=1:21.2+dfsg-1_xemacs21.log.gz
Description: application/gzip


Processed: Bug #916840 in groovy marked as pending

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #916840 [src:groovy] groovy: FTBFS with Java 11 due to polymorphic 
signature calls & SecurityManager changes
Added tag(s) pending.

-- 
916840: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916840
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916840: Bug #916840 in groovy marked as pending

2018-12-19 Thread Emmanuel Bourg
Control: tag -1 pending

Hello,

Bug #916840 in groovy reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/java-team/groovy/commit/b8d7ec119014a95450f9357efddc250e3888f030


Fixed the build failure with Java 11 (Closes: #916840)


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/916840



Bug#916855: glewlwyd: FTBFS: no dependency information found for /build/ulfius-build/libulfius.so.2.3

2018-12-19 Thread Emilio Pozuelo Monfort
Source: glewlwyd
Version: 1.4.6-3
Severity: serious
Tags: ftbfs

Hi,

On a rebuild against libulfius2.5, your package failed to build:

   dh_shlibdeps -a -O--buildsystem=cmake -O--builddirectory=build
dpkg-shlibdeps: error: no dependency information found for 
/<>/build/ulfius-build/libulfius.so.2.3 (used by 
debian/glewlwyd/usr/bin/glewlwyd)
Hint: check if the library actually comes from a package.
dh_shlibdeps: dpkg-shlibdeps -Tdebian/glewlwyd.substvars 
debian/glewlwyd/usr/bin/glewlwyd returned exit code 25
dh_shlibdeps: Aborting due to earlier error

>From the build log it looks like glewlwyd is building its own (old) version
of libulfius, rather than dynamically linking to the one from the Debian
package.

Full logs: https://buildd.debian.org/status/package.php?p=glewlwyd

Cheers,
Emilio



Bug#916342: marked as done (segyio FTBFS: test failure)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 14:47:16 +
with message-id 
and subject line Bug#916342: fixed in segyio 1.8.1-1
has caused the Debian Bug report #916342,
regarding segyio FTBFS: test failure
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916342: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916342
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: segyio
Version: 1.7.1-2
Severity: serious
Tags: ftbfs

Some recent change in unstable makes segyio FTBFS:

https://tests.reproducible-builds.org/debian/history/segyio.html
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/segyio.html

...
dh_auto_test --buildsystem=pybuild -- --test-args=test/*
I: pybuild pybuild:269: cp -r /build/1st/segyio-1.7.1/python/test 
/build/1st/segyio-1.7.1/test-data 
/build/1st/segyio-1.7.1/.pybuild/cpython3_3.6_segyio/build
I: pybuild base:217: cd 
/build/1st/segyio-1.7.1/.pybuild/cpython3_3.6_segyio/build; python3.6 -m pytest 
test/*
= test session starts ==
platform linux -- Python 3.6.8rc1, pytest-3.10.1, py-1.7.0, pluggy-0.8.0
rootdir: /build/1st/segyio-1.7.1, inifile: setup.cfg

= no tests ran in 0.08 seconds =
ERROR: not found: 
/build/1st/segyio-1.7.1/.pybuild/cpython3_3.6_segyio/build/test/segy.py
(no name 
'/build/1st/segyio-1.7.1/.pybuild/cpython3_3.6_segyio/build/test/segy.py' in 
any of ())

E: pybuild pybuild:338: test: plugin distutils failed with: exit code=4: cd 
/build/1st/segyio-1.7.1/.pybuild/cpython3_3.6_segyio/build; python3.6 -m pytest 
test/*
dh_auto_test: pybuild --test --test-pytest -i python{version} -p "3.6 3.7" 
--test-args=test/\* returned exit code 13
make[1]: *** [debian/rules:41: override_dh_auto_install] Error 25
--- End Message ---
--- Begin Message ---
Source: segyio
Source-Version: 1.8.1-1

We believe that the bug you reported is fixed in the latest version of
segyio, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jørgen Kvalsvik  (supplier of updated segyio package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 19 Dec 2018 13:28:54 +0100
Source: segyio
Binary: libsegyio1 libsegyio-dev segyio-bin python3-segyio
Architecture: source
Version: 1.8.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jørgen Kvalsvik 
Description:
 libsegyio-dev - SEG-Y read/write library for seismic processing (development)
 libsegyio1 - SEG-Y read/write library for seismic processing (runtime)
 python3-segyio - SEG-Y read/write library for seismic processing (python3 
bindings
 segyio-bin - SEG-Y read/write library for seismic processing (shell utilities)
Closes: 916342
Changes:
 segyio (1.8.1-1) unstable; urgency=medium
 .
   * New upstream release
   * Ignore python_files from setup.cfg (Closes: #916342)
Checksums-Sha1:
 2910ab6e84db42e9de3026d1e61c8477bfbf7570 2267 segyio_1.8.1-1.dsc
 04b517ffec03da7871249f53f03c189e8643034c 436447 segyio_1.8.1.orig.tar.gz
 f19ed00720acf206d2df141977914a99169e444e 4580 segyio_1.8.1-1.debian.tar.xz
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Checksums-Sha256:
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 969404b0823f1b716d0ba34445e4a90d884289b8f868843e93f092f62043ee24 9099 
segyio_1.8.1-1_amd64.buildinfo
Files:
 6eed3f624347f744fbe6c9593be4 2267 science optional segyio_1.8.1-1.dsc
 42a572c7f256856bb5b290e390dc7f3b 436447 science optional 
segyio_1.8.1.orig.tar.gz
 ad6dd4cda39e0871dd1b7b617782d13b 4580 science optional 
segyio_1.8.1-1.debian.tar.xz
 9e7cde8bbd1d0e275676795b69f126be 9099 science optional 
segyio_1.8.1-1_amd64.buildinfo

-BEGIN PGP SIGNATURE-

iQIzBAEBCgAdFiEEU5UdlScuDFuCvoxKLOzpNQ7OvkoFAlwaTO8ACgkQLOzpNQ7O

Bug#916683: libgnutls30: breaks msmtp 1.6.7-1

2018-12-19 Thread Fritz Reichwald
The issue is caused by a bug in msmtp which is already fixed in 1.8.1
https://gitlab.marlam.de/marlam/msmtp/issues/21

After I removed the patch in debian/patches that fixes only some typos
in the manpage but does not apply any longer with 1.8.1 sources the
package builds just fine. So hopefully the maintainer finds some time to
package the new release soon.

Until then just grab the sources from the repo and fetch the new
upstream sources with uscan, remove the patch and build it locally.

Best regards
Fritz

-- 
Fritz Reichwald
Linux Consultant
Tel: +49 160 8452444
Mail: reichw...@b1-systems.de

B1 Systems GmbH
Osterfeldstraße 7 / 85088 Vohburg / http://www.b1-systems.de
GF: Ralph Dehner / Unternehmenssitz: Vohburg / AG: Ingolstadt,HRB 3537


signature.asc
Description: PGP signature


Bug#916846: [libreoffice-ogltrans] Blank screen with OpenGL transitions

2018-12-19 Thread Alexander Kernozhitsky
Package: libreoffice-ogltrans
Version: 1:6.1.3-2
Severity: grave
Justification: renders package unusable

When I try to use OpenGL transitions in LibreOffice Impress, I get a bank 
screen for several seconds instead of a transition. This issue seems to be 
Debian-specific; I was trying the upstream version and it works fine.

Hardware acceleration is enabled in configuration; renderer I use is

Mesa DRI Intel(R) HD Graphics 620 (Kaby Lake GT2)

Upstream bug report:
https://bugs.documentfoundation.org/show_bug.cgi?id=115716

--- System information. ---
Architecture: 
Kernel:   Linux 4.18.0-3-amd64

Debian Release: buster/sid
  990 testing ftp.by.debian.org 
  500 unstableftp.by.debian.org 

--- Package information. ---
Depends(Version) | Installed
-+-=
libreoffice-common   | 1:6.1.3-2
libreoffice-core   (= 1:6.1.3-2) | 1:6.1.3-2
libreoffice-impress  | 1:6.1.3-2
libc6  (>= 2.14) | 
libepoxy0   (>= 1.0) | 
libgcc1   (>= 1:3.0) | 
libstdc++6(>= 5) | 
uno-libs3   (>= 4.4.0~alpha) | 
ure  | 
libreoffice-core   (= 1:6.1.3-2) | 1:6.1.3-2
libreoffice-draw   (= 1:6.1.3-2) | 
libc6  (>= 2.14) | 
libepoxy0   (>= 1.0) | 
libetonyek-0.1-1 | 
libgcc1   (>= 1:3.0) | 
libmwaw-0.3-3| 
libodfgen-0.1-1  | 
librevenge-0.0-0 | 
libstaroffice-0.0-0  | 
libstdc++6(>= 5) | 
libxml2  (>= 2.6.27) | 
uno-libs3   (>= 5.3.0~alpha) | 
ure  | 
zlib1g  (>= 1:1.1.4) | 


Recommends (Version) | Installed
-+-===
libreoffice-avmedia-backend-gstreamer| 1:6.1.3-2
 OR libreoffice-avmedia-backend-vlc  | 


Suggests  (Version) | Installed
===-+-===
bluez   | 5.50-1
-- 
Alexander Kernozhitsky



Processed: affects 915469

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> affects 915469 src:gwave
Bug #915469 [g-wrap] gwave FTBFS: error: found development files for Guile 2.0, 
but /usr/bin/guile has effective version 2.2
Added indication that 915469 affects src:gwave
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
915469: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=915469
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916840: groovy: FTBFS with Java 11 due to polymorphic signature calls & SecurityManager changes

2018-12-19 Thread Emmanuel Bourg
Package: src:groovy
Version: 2.4.15-3
Severity: serious
User: debian-j...@lists.debian.org
Usertags: default-java11


groovy fails to build with Java 11, there are two different errors.

The first one:

  
groovy-2.4.15/src/main/org/codehaus/groovy/vmplugin/v7/IndyInterface.java:236: 
error: polymorphic signature calls are not supported in -target 1.6
  return call.invokeExact(arguments);
 ^
(use -target 1.7 or higher to enable polymorphic signature calls)


and the second one:

  
groovy-2.4.15/subprojects/groovy-console/src/main/groovy/groovy/ui/text/StructuredSyntaxResources.java:44:
 error: cannot find symbol
  mgr.checkSystemClipboardAccess();
 ^
symbol:   method checkSystemClipboardAccess()
location: variable mgr of type SecurityManager



Bug#916345: libmodbus: FTBFS on mips, s390x: test failure

2018-12-19 Thread 林上智
Hi,

SZ Lin (林上智)  於 2018年12月18日 週二 下午2:18寫道:
>
> Hi,
>
> Ivo De Decker  於 2018年12月13日 週四 下午8:03寫道:
> >
> > package: src:libmodbus
> > version: 3.1.4-1
> > severity: serious
> > tags: ftbfs
> >
> > Hi,
> >
> > The latest version of libmodbus in unstable fails on mips, s390x:
> >
> > https://buildd.debian.org/status/package.php?p=libmodbus
> >
> > The failure happens in the testsuite.
> >
> > Based on the failing architectures, it might be an endianess issue.
>
> I've reproduced this issue with MIPS architecture.
>
> ===
> TEST FLOATS
> 1/4 Set/get float ABCD:
> Line 289: assertion error for 'equal_dword(tab_rp_registers,
> UT_IREAL_ABCD)': FAILED Set float ABCD
> **
> ===
>
> According to above information, it might be a float endianess issue
> and there is a potential fix for it [1].
>
> I will continually squeeze my time to track this issue.
>
> Any feedback is welcome.
>
> [1] https://github.com/stephane/libmodbus/issues/358
>
> SZ

I've patched float endianness issue [1] and built successfully on
mips, s390x, amd64 architecture.

[1] 
https://salsa.debian.org/debian/libmodbus/blob/debian/master/debian/patches/Fix-float-endianness-issue-on-big-endian-arch.patch

The new version of libmodbus will be uploaded if you don't have any concerns.

Thanks.

SZ

> >
> >
> > Also, please note this error:
> >
> > ./unit-tests.sh: 17: ./unit-tests.sh: killall: not found
> >
> > This doesn't happen for the builds that succeed. I guess the killall is done
> > when the tests fail. This means a dependency on psmisc is missing.
>
> Now fixed, thanks,
>
> SZ
> >
> > Thanks,
> >
> > Ivo



Bug#910786: opensc: No longer recognizes Yubikey NEO after upgrade to 0.16.0-3+deb9u1

2018-12-19 Thread Hilko Bengen
* Gianfranco Costamagna:

> I see this code changed a lot in 0.19... is this still a problem?

It is still a problem with opensc/0.16.0-3+deb9u1 as currently available
from stretch. Backporting opensc/0.19.0-1 for stretch is trivial and has
resolved the problem for me and my colleagues.

I suggest fixing the problem in stretch via an update to 0.19 as
suggested by Adam D. Barratt in #913674.

Cheers,
-Hilko



Bug#909909: marked as done (groovy FTBFS)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 12:25:11 +0100
with message-id <32d757da-797a-96fa-3a25-f3125fa88...@apache.org>
and subject line Re: Bug#909909: groovy FTBFS
has caused the Debian Bug report #909909,
regarding groovy FTBFS
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
909909: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=909909
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: groovy
Version: 2.4.15-3
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/groovy.html

...
:groovy:compileGroovy FAILED
:compileGroovy (Thread[Task worker for ':groovy',5,main]) completed. Took 
15.222 secs.
:jarAllWithIndy FAILED
:jarAllWithIndy (Thread[Task worker for ':' Thread 12,5,main]) completed. Took 
31.776 secs.

FAILURE: Build failed with an exception.

* What went wrong:
Execution failed for task ':groovy:compileGroovy'.
> org/codehaus/groovy/control/Phases

* Try:
Run with --debug option to get more log output. Run with --scan to get full 
insights.

* Exception is:
org.gradle.api.tasks.TaskExecutionException: Execution failed for task 
':groovy:compileGroovy'.
at 
org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:100)
at 
org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:70)
at 
org.gradle.api.internal.tasks.execution.OutputDirectoryCreatingTaskExecuter.execute(OutputDirectoryCreatingTaskExecuter.java:51)
at 
org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:62)
at 
org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54)
at 
org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60)
at 
org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97)
at 
org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87)
at 
org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52)
at 
org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52)
at 
org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54)
at 
org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43)
at 
org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34)
at 
org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248)
at 
org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336)
at 
org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328)
at 
org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199)
at 
org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110)
at 
org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241)
at 
org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230)
at 
org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123)
at 
org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79)
at 
org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104)
at 
org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98)
at 
org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626)
at 
org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581)
at 

Bug#916766: marked as done (libucto3: missing Breaks+Replaces: libucto2)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 11:21:02 +
with message-id 
and subject line Bug#916766: fixed in ucto 0.14-2
has caused the Debian Bug report #916766,
regarding libucto3: missing Breaks+Replaces: libucto2
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
916766: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916766
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libucto3
Version: 0.14-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package failed to install
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package libucto3:amd64.
  Preparing to unpack .../libucto3_0.14-1_amd64.deb ...
  Unpacking libucto3:amd64 (0.14-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libucto3_0.14-1_amd64.deb (--unpack):
   trying to overwrite '/usr/share/ucto/textcat.cfg', which is also in package 
libucto2:amd64 0.9.6-1+b1
  Errors were encountered while processing:
   /var/cache/apt/archives/libucto3_0.14-1_amd64.deb


cheers,

Andreas


libucto2=0.9.6-1+b1_libucto3=0.14-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: ucto
Source-Version: 0.14-2

We believe that the bug you reported is fixed in the latest version of
ucto, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 916...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Maarten van Gompel  (supplier of updated ucto package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 19 Dec 2018 12:01:32 +0100
Source: ucto
Binary: ucto libucto-dev libucto3
Architecture: source
Version: 0.14-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Maarten van Gompel 
Description:
 libucto-dev - Unicode Tokenizer - development
 libucto3   - Unicode Tokenizer - runtime
 ucto   - Unicode Tokenizer
Closes: 916766
Changes:
 ucto (0.14-2) unstable; urgency=medium
 .
   * Re-added Breaks+Replace libucto3 <- libucto2
 (Closes: #916766). Thanks to Andreas Beckmann.
Checksums-Sha1:
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 2d6f1960f9f0f6c16053e5b963428198a1707727 5788 ucto_0.14-2.debian.tar.xz
 4d357c6eb986eee4eb5a288c1f20e392cd6c9ac0 5385 ucto_0.14-2_source.buildinfo
Checksums-Sha256:
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ucto_0.14-2.dsc
 79ec9abfba013097e3a4b22befb658f076d365393eb6e40e4b7a24725d4649eb 5788 
ucto_0.14-2.debian.tar.xz
 a12754ffd836b89b41bec84408a50c7efc026ed54f57a0021fabea2ebf820220 5385 
ucto_0.14-2_source.buildinfo
Files:
 98cc810b44f1e59c2b3d90b31d4df34b 1802 science optional ucto_0.14-2.dsc
 180ef00f940a8af68fbc124dc7ea9a80 5788 science optional 
ucto_0.14-2.debian.tar.xz
 8176b451a8fe847ea7ee8d91fdd753ea 5385 science optional 
ucto_0.14-2_source.buildinfo

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Processed (with 1 error): imagemagick: Silent ABI break in 6.9.10-11 on i386

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> forwareded -1 https://github.com/ImageMagick/ImageMagick6/issues/31
Unknown command or malformed arguments to command.

> tags -1 upstream fixed-upstream
Bug #916839 [imagemagick] imagemagick: Silent ABI break in 6.9.10-11 on i386
Added tag(s) fixed-upstream and upstream.
> affects -1 ruby-rmagick
Bug #916839 [imagemagick] imagemagick: Silent ABI break in 6.9.10-11 on i386
Added indication that 916839 affects ruby-rmagick

-- 
916839: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916839
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916839: imagemagick: Silent ABI break in 6.9.10-11 on i386

2018-12-19 Thread Balint Reczey
Package: imagemagick
Version: 8:6.9.10.14+dfsg-1
Severity: grave
Control: forwareded -1 https://github.com/ImageMagick/ImageMagick6/issues/31
Control: tags -1 upstream fixed-upstream
Control: affects -1 ruby-rmagick

Hi,

The ABI broke in 6.9.10-11 due to changing MagickDoubleType to double
from long double.
This breaks ruby-rmagick and possibly other reverse dependencies, thus
after fixing imagemagick please check if some reverse dependencies
need to be rebuilt. The fix will be available in the .18 upstream
release.

Cheers,
Balint

-- 
Balint Reczey
Ubuntu & Debian Developer



Bug#910786: opensc: No longer recognizes Yubikey NEO after upgrade to 0.16.0-3+deb9u1

2018-12-19 Thread Gianfranco Costamagna
On Thu, 11 Oct 2018 23:32:49 +0200 Hilko Bengen  wrote:
> Hi,
> 
> after some digging and testing, I come to the conclusion that the the
> immediate cause for the breakage I reported is the change made to the
> piv_general_io() function (src/libopensc/card-piv.c, expanded for
> context): Because rbuflen is set to zero, sc_asn1_read_tag will never
> read/parse an ASN.1 tag.
> 
> Reverting this single change seems to fix my problems, however this
> leaves the clear possibility for overflowing receive buffers that are
> passed into the function, this has so far only worked by accident...
> 
> Cheers,
> -Hilko
> 
> @@ -525,15 +525,16 @@ static int piv_general_io(sc_card_t *card, int ins, int 
> p1, int p2,
>   rbuflen = 0;  /* in case rseplen < 3  i.e. not parseable */
>   if ( recvbuflen && recvbuf && apdu.resplen > 3) {
>   *recvbuflen = 0;
>   /* we should have all the tag data, so we have to tell 
> sc_asn1_find_tag
>* the buffer is bigger, so it will not produce "ASN1.tag too 
> long!" */
>  
>   body = rbuf;
> - if (sc_asn1_read_tag(, 0x, _out, _out, 
> ) !=  SC_SUCCESS)   {
> + if (sc_asn1_read_tag(, rbuflen, _out, _out, 
> ) !=  SC_SUCCESS
> + || body == NULL)  {
>   /* only early beta cards had this problem */
>   sc_debug(card->ctx, SC_LOG_DEBUG_NORMAL, "* 
> received buffer tag MISSING ");
>   body = rbuf;
>   /* some readers/cards might return 6c 00 */
>   if (apdu.sw1 == 0x61  || apdu.sw2 == 0x6c )
>   bodylen = 12000;
>   else
> 


I see this code changed a lot in 0.19... is this still a problem?

G.
> 



Bug#912184: marked as done (python-testfixtures FTBFS with python 3.7 as supported version)

2018-12-19 Thread Debian Bug Tracking System
Your message dated Wed, 19 Dec 2018 10:52:15 +
with message-id 
and subject line Bug#912184: fixed in python-testfixtures 4.14.3-2
has caused the Debian Bug report #912184,
regarding python-testfixtures FTBFS with python 3.7 as supported version
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
912184: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912184
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-testfixtures
Version: 4.14.3-1
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/python-testfixtures.html

...
I: pybuild base:217: python3.7 /usr/bin/zope-testrunner 
--path=/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build
 testfixtures
Running zope.testrunner.layer.UnitTests tests:
  Set up zope.testrunner.layer.UnitTests in 0.000 seconds.


Failure in test test_exception_diff 
(testfixtures.tests.test_compare.TestCompare)
Traceback (most recent call last):
  File "/usr/lib/python3.7/unittest/case.py", line 59, in testPartExecutor
yield
  File "/usr/lib/python3.7/unittest/case.py", line 615, in run
testMethod()
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 170, in test_exception_diff
"ValueError('some message',) != ValueError('some other message',)"
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 51, in check_raises
compare(actual, expected=message, show_whitespace=True)
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/comparison.py",
 line 485, in compare
raise AssertionError(message)
AssertionError: 
"ValueError('some message',) != ValueError('some other message',)" (expected)
!=
"ValueError('some message') != ValueError('some other message')" (actual)



Failure in test test_exception_diff_c_wrapper 
(testfixtures.tests.test_compare.TestCompare)
Traceback (most recent call last):
  File "/usr/lib/python3.7/unittest/case.py", line 59, in testPartExecutor
yield
  File "/usr/lib/python3.7/unittest/case.py", line 615, in run
testMethod()
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 184, in test_exception_diff_c_wrapper
).format(exception_module))
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 51, in check_raises
compare(actual, expected=message, show_whitespace=True)
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/comparison.py",
 line 485, in compare
raise AssertionError(message)
AssertionError: 
--- expected
+++ actual
@@ -1,4 +1,4 @@
 '\n'
 '  \n'
 "  args:('some message',) != ('some other message',)\n"
-"   != ValueError('some other message',)"
+"   != ValueError('some other message')"



Failure in test test_exception_different_object 
(testfixtures.tests.test_compare.TestCompare)
Traceback (most recent call last):
  File "/usr/lib/python3.7/unittest/case.py", line 59, in testPartExecutor
yield
  File "/usr/lib/python3.7/unittest/case.py", line 615, in run
testMethod()
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 157, in test_exception_different_object
"ValueError('some message',) != ValueError('some message',)"
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/tests/test_compare.py",
 line 51, in check_raises
compare(actual, expected=message, show_whitespace=True)
  File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/testfixtures/comparison.py",
 line 485, in compare
raise AssertionError(message)
AssertionError: 
"ValueError('some message',) != ValueError('some message',)" (expected)
!=
"ValueError('some message') != ValueError('some message')" (actual)



Failure in test 
/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/docs/warnings.txt

--
File 
"/build/1st/python-testfixtures-4.14.3/.pybuild/cpython3_3.7_testfixtures/build/docs/warnings.txt",
 line 26, in warnings.txt
Failed example:
with ShouldWarn(UserWarning('you should fix that')):
warn("sorry dave, I can't let you do that")
Differences (ndiff with 

Bug#893409: pixelmed FTBFS with openjdk-9

2018-12-19 Thread Andreas Tille
Hi,

On Wed, Dec 19, 2018 at 10:39:55AM +0100, Olivier Sallou wrote:
> > The missing class is in libjaxb-api-java. Just make sure it's on the
> > CLASSPATH.
> 
> yeap, an other issue at java migration to openjdk 10/11
> 
> Adding this lib to deps should fix the pb

Thanks for the quick help.  I tried:


diff --git a/debian/control b/debian/control
index e0548ee..3f8b86c 100644
--- a/debian/control
+++ b/debian/control
@@ -14,7 +14,8 @@ Build-Depends-Indep: default-jdk,
  libjmdns-java,
  libvecmath-java,
  libpixelmed-codec-java,
- libjsonp-java
+ libjsonp-java,
+ libjaxb-api-java
 Standards-Version: 4.2.1
 Vcs-Browser: https://salsa.debian.org/med-team/pixelmed
 Vcs-Git: https://salsa.debian.org/med-team/pixelmed.git
diff --git a/debian/patches/fixdoc.patch b/debian/patches/fixdoc.patch
index 752b78c..1737f5f 100644
--- a/debian/patches/fixdoc.patch
+++ b/debian/patches/fixdoc.patch
@@ -11,7 +11,7 @@ Index: pixelmed-20140326/Makefile
rm -rf docs/javadoc
javadoc \
 -  -classpath 
.:lib/additional/excalibur-bzip2-1.0.jar:lib/additional/hsqldb.jar:lib/additional/vecmath1.2-1.14.jar:lib/additional/commons-codec-1.3.jar:lib/additional/commons-net2.jar:lib/additional/jmdns.jar:lib/additional/jpedalSTD.jar:lib/junit/junit-4.8.1.jar
 \
-+  -classpath 
.:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar
 \
++  -classpath 
.:/usr/share/java/excalibur-bzip2-1.0.jar:/usr/share/java/hsqldb.jar:/usr/share/java/vecmath.jar:/usr/share/java/commons-codec.jar:/usr/share/java/commons-net2.jar:/usr/share/java/jmdns.jar:/usr/share/java/jpedalSTD.jar:/usr/share/java/junit4.jar:/usr/share/java/jaxb-api.jar
 \
-link http://download.oracle.com/javase/1.5.0/docs/api/ \
-link http://jpedal.org/javadoc/ \
-link http://www.hsqldb.org/doc/src/ \
diff --git a/debian/patches/jaxb-api.patch b/debian/patches/jaxb-api.patch
new file mode 100644
index 000..85760dd
--- /dev/null
+++ b/debian/patches/jaxb-api.patch
@@ -0,0 +1,16 @@
+Description: For OpenJDK 11 jaxb needs to be in classpath
+Bug-Debian: https://bugs.debian.org/893409
+Author: Andreas Tille 
+Last-Update: Wed, 19 Dec 2018 08:53:43 +0100
+
+--- a/Makefile.common.mk
 b/Makefile.common.mk
+@@ -65,7 +65,7 @@ JAVACOPTIONS = -O ${JAVACTARGETOPTIONS}
+ 
+ .java.class:
+   export JAVAVERSIONTARGETJARFILE=${JAVA_HOME}/jre/lib/rt.jar; javac 
${JAVACOPTIONS} \
+-  -classpath 
${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}
 \
++  -classpath 
${PATHTOROOT}:${DICOMADDITIONALJARS}:${VIEWERADDITIONALJARS}:${FTPADDITIONALJARS}:${JUNITJAR}:/usr/share/java/jaxb-api.jar
 \
+   -sourcepath ${PATHTOROOT} $<
+ 
+ .png.ico:
diff --git a/debian/patches/series b/debian/patches/series
index 10286d4..6abfc45 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -16,3 +16,4 @@ set_java_home.patch
 imageio.patch
 no_Xdiags_verbose.patch
 do_not_set_bootclasspath.patch
+jaxb-api.patch



I've pushed these changes but unfortunately it does not help. :-(

Any further hints?

Kind regards

  Andreas.


-- 
http://fam-tille.de



Processed: Segfault in test suite of new upstream version (Was: python-mne FTBFS with python-matplotlib 2.2.2-1)

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 help
Bug #896025 [src:python-mne] python-mne FTBFS with python-matplotlib 2.2.2-1
Added tag(s) help.
> tags -1 upstream
Bug #896025 [src:python-mne] python-mne FTBFS with python-matplotlib 2.2.2-1
Added tag(s) upstream.
> forwarded -1 https://github.com/mne-tools/mne-python/issues/5806
Bug #896025 [src:python-mne] python-mne FTBFS with python-matplotlib 2.2.2-1
Set Bug forwarded-to-address to 
'https://github.com/mne-tools/mne-python/issues/5806'.

-- 
896025: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=896025
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#896025: Segfault in test suite of new upstream version (Was: python-mne FTBFS with python-matplotlib 2.2.2-1)

2018-12-19 Thread Andreas Tille
Control: tags -1 help
Control: tags -1 upstream
Control: forwarded -1 https://github.com/mne-tools/mne-python/issues/5806

Hi,

it seems the matplotlib issue reported here is solved in the last
upstream version which I commited to packaging Git[1].  Unfortunately
there is another issue which I reported upstream[2]:

...
make[1]: Entering directory '/build/python-mne-0.17+dfsg'
mkdir -p build
HOME=/build/python-mne-0.17+dfsg/build \
MNE_DONTWRITE_HOME=true MNE_SKIP_SAMPLE_DATASET_TESTS=true 
MNE_FORCE_SERIAL=true MNE_SKIP_NETWORK_TESTS=1 \
  xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac 
+extension GLX +render -noreset" \
  py.test -s -v mne
= test session starts 
==
platform linux2 -- Python 2.7.15+, pytest-3.10.1, py-1.7.0, pluggy-0.8.0 -- 
/usr/bin/python2
cachedir: .pytest_cache
rootdir: /build/python-mne-0.17+dfsg, inifile: setup.cfg
plugins: cov-2.6.0
collecting ... Using default location ~/mne_data for testing...
Creating ~/mne_data
Using default location ~/mne_data for testing...
Using default location ~/mne_data for testing...
...
Using default location ~/mne_data for testing...
Using default location ~/mne_data for testing...
Segmentation fault
make[1]: *** [debian/rules:26: override_dh_auto_test] Error 139
make[1]: Leaving directory '/build/python-mne-0.17+dfsg'


I wonder whether one of the Uploaders (in CC) will be able to
fix this since I feel absolutely incompetent to solve this.

Kind regards

   Andreas.


[1] https://salsa.debian.org/med-team/python-mne
[2] https://github.com/mne-tools/mne-python/issues/5806

-- 
http://fam-tille.de



Processed: affects 916548

2018-12-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> affects 916548 pyzo
Bug #916548 [python3.7] python3.7: Version constraint in pyzo breaks is too 
strict
Added indication that 916548 affects pyzo
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
916548: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916548
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#916835: gemma ftbfs on arm64 and mips64el where it built before

2018-12-19 Thread Andreas Tille
Control: tags -1 help
Control: tags -1 upstream
Control: forwarded -1 https://github.com/genetics-statistics/GEMMA/issues/189



Processed: Re: Bug#916835: gemma ftbfs on arm64 and mips64el where it built before

2018-12-19 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 help
Bug #916835 [src:gemma] gemma ftbfs on arm64 and mips64el where it built before
Added tag(s) help.
> tags -1 upstream
Bug #916835 [src:gemma] gemma ftbfs on arm64 and mips64el where it built before
Added tag(s) upstream.
> forwarded -1 https://github.com/genetics-statistics/GEMMA/issues/189
Bug #916835 [src:gemma] gemma ftbfs on arm64 and mips64el where it built before
Set Bug forwarded-to-address to 
'https://github.com/genetics-statistics/GEMMA/issues/189'.

-- 
916835: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916835
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#893409: pixelmed FTBFS with openjdk-9

2018-12-19 Thread Olivier Sallou

On 12/19/18 10:03 AM, Markus Koschany wrote:
> Hi,
>
> Am 19.12.18 um 09:58 schrieb Andreas Tille:
> [...]
>> Any hint how to fix this?
> The missing class is in libjaxb-api-java. Just make sure it's on the
> CLASSPATH.

yeap, an other issue at java migration to openjdk 10/11

Adding this lib to deps should fix the pb


> Regards,
>
> Markus
>
>
>
> ___
> Debian-med-packaging mailing list
> debian-med-packag...@alioth-lists.debian.net
> https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging

-- 
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95

gpg key id: 4096R/326D8438  (keyring.debian.org)
Key fingerprint = 5FB4 6F83 D3B9 5204 6335  D26D 78DC 68DB 326D 8438



signature.asc
Description: OpenPGP digital signature


Bug#916835: gemma ftbfs on arm64 and mips64el where it built before

2018-12-19 Thread Matthias Klose
Package: src:gemma
Version: 0.98.1+dfsg-1
Severity: serious
Tags: sid buster

gemma ftbfs on arm64 and mips64el where it built before (test failures)

arm64:
Ran 12 tests.

FAILED (failures=13)
tail -n 1 dev_test.log | grep -q 'OK'
make[2]: *** [Makefile:231: fast-check] Error 1

mips64el:
Ran 12 tests.

FAILED (failures=2)
tail -n 1 test.log | grep -q  'OK' test.log
make[2]: *** [Makefile:236: slow-check] Error 1



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