Bug#1040776: [Debian-med-packaging] Bug#1040776: python-biopython: autopkgtest regression

2023-07-10 Thread Étienne Mollier
Hi Adrian,

Adrian Bunk, on 2023-07-10:
> 580s ModuleNotFoundError: No module named 'reportlab.graphics._renderPM'

Thanks for your report, migrations of biopython and reportlab
seem to have gone entangled.  I'll bump the version requirement
of python3-reportlab to unlock the situation.

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier 
 : :' :  gpg: 8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
 `. `'   sent from /dev/pts/2, please excuse my verbosity
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Bug#1040776: python-biopython: autopkgtest regression

2023-07-10 Thread Adrian Bunk
Source: python-biopython
Version: 1.80+dfsg-5
Severity: serious

https://ci.debian.net/data/autopkgtest/testing/amd64/p/python-biopython/35614880/log.gz

...
580s ==
580s ERROR: test_diagram_via_methods_pdf 
(test_GenomeDiagram.DiagramTest.test_diagram_via_methods_pdf)
580s Construct and draw PDF using method approach.
580s --
580s Traceback (most recent call last):
580s   File 
"/tmp/autopkgtest-lxc.aeaunhwi/downtmp/autopkgtest_tmp/Tests/test_GenomeDiagram.py",
 line 1001, in test_diagram_via_methods_pdf
580s gdd.write(output_filename, "PDF")
580s   File 
"/usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py", line 
244, in write
580s return _write(self.drawing, filename, output, dpi=dpi)
580s^^^
580s   File "/usr/lib/python3/dist-packages/Bio/Graphics/__init__.py", line 46, 
in _write
580s from reportlab.graphics import renderPS, renderPDF, renderSVG
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/renderSVG.py", 
line 22, in 
580s from .renderPM import _getImage
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/renderPM.py", 
line 20, in 
580s from .utils import setFont as _setFont, RenderPMError
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/utils.py", line 
9, in 
580s from . _renderPM import makeT1Font
580s ModuleNotFoundError: No module named 'reportlab.graphics._renderPM'
...
582s autopkgtest [22:48:48]: test full_suite:  - - - - - - - - - - results - - 
- - - - - - - -
582s autopkgtest [22:48:48]:  summary
582s dependencies FAIL non-zero exit status 1
582s full_suite   FAIL non-zero exit status 1