Your message dated Sun, 01 Oct 2023 18:34:12 +
with message-id
and subject line Bug#1053267: fixed in hickle 5.0.2-6
has caused the Debian Bug report #1053267,
regarding hickle: test_H5NodeFilterProxy fails with h5py 3.9.0: Unable to
delete attribute (no write intent on file)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1053267: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1053267
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hickle
Version: 5.0.2-5
Severity: serious
Justification: debci
h5py 3.9.0 is triggering an error in hickle tests, found by debci,
https://ci.debian.net/data/autopkgtest/testing/amd64/h/hickle/38279474/log.gz
62s test_H5NodeFilterProxy
62s
62s h5_data =
62s
62s def test_H5NodeFilterProxy(h5_data):
62s """
62s tests H5NodeFilterProxy class. This class allows to temporarily
rewrite
62s attributes of h5py.Group and h5py.Dataset nodes before being
loaded by
62s hickle._load method.
62s """
62s
62s # load data and try to directly modify 'type' and 'base_type'
Attributes
62s # which will fail cause hdf5 file is opened for read only
62s h5_node = h5_data['somedata']
62s with pytest.raises(OSError):
62s try:
62s > h5_node.attrs['type'] = pickle.dumps(list)
62s
62s
/tmp/autopkgtest-lxc.kwo7jiul/downtmp/build.aWU/src/hickle/tests/test_01_hickle_helpers.py:126:
62s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
62s h5py/_debian_h5py_serial/_objects.pyx:54: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
62s ???
62s h5py/_debian_h5py_serial/_objects.pyx:55: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
62s ???
62s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/attrs.py:104:
in __setitem__
62s self.create(name, data=value)
62s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/attrs.py:200:
in create
62s h5a.delete(self._id, name)
62s h5py/_debian_h5py_serial/_objects.pyx:54: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
62s ???
62s h5py/_debian_h5py_serial/_objects.pyx:55: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
62s ???
62s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
62s
62s > ???
62s E KeyError: 'Unable to delete attribute (no write intent on file)'
62s
62s h5py/_debian_h5py_serial/h5a.pyx:145: KeyError
--- End Message ---
--- Begin Message ---
Source: hickle
Source-Version: 5.0.2-6
Done: Edward Betts
We believe that the bug you reported is fixed in the latest version of
hickle, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1053...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Edward Betts (supplier of updated hickle package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
Format: 1.8
Date: Sun, 01 Oct 2023 19:16:58 +0100
Source: hickle
Architecture: source
Version: 5.0.2-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team
Changed-By: Edward Betts
Closes: 1053267
Changes:
hickle (5.0.2-6) unstable; urgency=medium
.
* Apply patch from Nilesh Patra to allow unit tests to work with latest
version of h5py. (Closes: #1053267)
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Files:
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