Accepted votca-csg 1.6~rc1-2 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 26 Jan 2020 10:39:21 -0800
Source: votca-csg
Architecture: source
Version: 1.6~rc1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 votca-csg (1.6~rc1-2) unstable; urgency=medium
 .
   * No-changes, source-only upload for transition to testing.
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Accepted votca-tools 1.6~rc1-3 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 26 Jan 2020 10:22:42 -0800
Source: votca-tools
Architecture: source
Version: 1.6~rc1-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Closes: 949774
Changes:
 votca-tools (1.6~rc1-3) unstable; urgency=medium
 .
   * Add Breaks/Replaces: libvotca-tools-dev (<< 1.6~rc1-1) to votca-tools
 for a file move.  (Closes: #949774)
   * Remove old Breaks/Replaces from oldstable and before.
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Accepted votca-csg 1.6~rc1-1 (source amd64 all) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 23 Jan 2020 18:34:42 -0800
Source: votca-csg
Binary: libvotca-csg-dev libvotca-csg6 libvotca-csg6-dbgsym votca-csg 
votca-csg-dbgsym votca-csg-scripts votca-csg-tutorials
Architecture: source amd64 all
Version: 1.6~rc1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-csg-dev - VOTCA's coarse-graining library, development kit
 libvotca-csg6 - VOTCA's coarse-graining library
 votca-csg  - VOTCA's coarse-graining engine
 votca-csg-scripts - VOTCA's coarse-graining scripts
 votca-csg-tutorials - VOTCA's coarse-graining tutorials
Closes: 949669
Changes:
 votca-csg (1.6~rc1-1) unstable; urgency=medium
 .
   * New upstream release candidate.
 - SONAME bump to libvotca-csg6.
 - Discard existing debian/patches/*.patch, incorporated upstream.
   * Increment Depends: on gromacs to >= 2020-2 - minimum 2020 version
 with necessary headers.  (Closes: #949669)
   * d/patches/directory-with-tilde.patch: Fix builds with certain special
 characters in the build path, such as the ~ in "1.6~rc1".
   * Update Standards-Version to 4.5.0, no changes required.
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Accepted votca-tools 1.6~rc1-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Thu, 23 Jan 2020 18:20:06 -0800
Source: votca-tools
Architecture: source
Version: 1.6~rc1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 votca-tools (1.6~rc1-2) unstable; urgency=medium
 .
   * d/patches/smoothing_test.diff: Cherry-pick from upstream commit at
 <https://github.com/votca/tools/issues/195>, to solve test failures
 at table_test/smoothing_test on many architectures.
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Accepted votca-tools 1.6~rc1-1 (source amd64) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 20 Jan 2020 16:10:53 -0800
Source: votca-tools
Binary: libvotca-tools-dev libvotca-tools6 libvotca-tools6-dbgsym votca-tools 
votca-tools-dbgsym
Architecture: source amd64
Version: 1.6~rc1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-tools-dev - VOTCA's tools library, development kit
 libvotca-tools6 - VOTCA's tools library
 votca-tools - VOTCA's tools library, helper binaries
Changes:
 votca-tools (1.6~rc1-1) unstable; urgency=medium
 .
   * New upstream release candidate.
 - Rename libvotca-tools5 to libvotca-tools6.
 - Remove B-D on libsqlite3-dev, no longer needed.
   * Add new 'votca-tools' (binary) package for helper tools.  Add B-D on
 dh-python and python3 for votca_compare script.
   * Update to Standards-Version 4.5.0, no changes required.
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libvotca-tools-dev_1.6~rc1-1_amd64.deb
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libvotca-tools6-dbgsym_1.6~rc1-1_amd64.deb
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libvotca-tools6_1.6~rc1-1_amd64.deb
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votca-tools_1.6~rc1-1_amd64.buildinfo
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votca-tools_1.6~rc1-1_amd64.deb

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Accepted gromacs 2020-2 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Mon, 20 Jan 2020 18:44:53 -0800
Source: gromacs
Architecture: source
Version: 2020-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020-2) unstable; urgency=medium
 .
   * Upload to unstable.
   * debian/man/mdrun_mpi.*.1: Update from gmx-mdrun(1).
   * Install legacy API (GMX_INSTALL_LEGACY_API) from non-MPI builds, for
 compatibility with votca-csg requiring gromacs/version.h.
   * Bump Standards-Version to 4.5.0, no changes required.
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Accepted gromacs 2020-1 (source) into experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 05 Jan 2020 11:51:57 -0800
Source: gromacs
Architecture: source
Version: 2020-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020-1) experimental; urgency=medium
 .
   * New upstream release.
   * debian/patches/doxygen.patch: Update with a workaround for a build
 failure using doxygen >= 1.8.16.
   * Set GMX_VERSION_STRING_OF_FORK to a combination of the distro name
 (Debian, Ubuntu, ...) and package version number. Add Build-Depends
 on lsb-release for the tools providing the distro information.
   * debian/copyright: Update.
   * debian/gromacs-data.lintian-overrides: Add override for false
 positives on "manpage-without-executable" tag.
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Accepted gromacs 2020~beta3-1 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Tue, 03 Dec 2019 20:01:45 -0800
Source: gromacs
Architecture: source
Version: 2020~beta3-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020~beta3-1) experimental; urgency=medium
 .
   * New upstream beta release.
   * Remove last four patches, incorporated upstream.
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Accepted votca-csg 1.5.1-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 29 Nov 2019 12:36:59 -0800
Source: votca-csg
Architecture: source
Version: 1.5.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Closes: 933801
Changes:
 votca-csg (1.5.1-1) unstable; urgency=medium
 .
   * New upstream release.
   * Update Standards-Version to 4.4.1 and debhelper to version 12.  No
 changes required.
   * Add Depends on libboost-{filesystem, program-options, system}-dev to
 libvotca-csg-dev.
   * debian/watch: Upgrade to v4 and add check for tutorials component.
   * debian/patches/python3-transition.patch: Cherry-pick latest files from
 upstream git in share/scripts/inverse and tutorials/ for the python2 ->
 python3 transition.  (Closes: #933801)
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Accepted votca-tools 1.5.1-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 29 Nov 2019 10:24:02 -0800
Source: votca-tools
Architecture: source
Version: 1.5.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 votca-tools (1.5.1-1) unstable; urgency=medium
 .
   * New upstream release.
   * Update to Standards-Version 4.4.1 and debhelper 12.  No changes
 required.
   * Add dependencies on lib{boost-filesystem, boost-program-options,
 eigen1}-dev to libvotca-tools-dev.
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Accepted gromacs 2020~beta2-2 (source) into experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Thu, 28 Nov 2019 14:19:39 -0800
Source: gromacs
Architecture: source
Version: 2020~beta2-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020~beta2-2) experimental; urgency=medium
 .
   * Additional patch relax-bd-test-tolerances.patch for amd64 test
 failures. <https://gerrit.gromacs.org/c/gromacs/+/14479>
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Accepted gromacs 2020~beta2-1 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Sat, 23 Nov 2019 11:56:52 -0800
Source: gromacs
Architecture: source
Version: 2020~beta2-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020~beta2-1) experimental; urgency=medium
 .
   * New upstream beta release.
   * Add patches from <http://redmine.gromacs.org/issues/3205>:
 - hwloc-cache-size-detection.patch from revision c5a01a73
 - relax-listed-forces-test-tolerances.patch from
   <https://gerrit.gromacs.org/c/gromacs/+/14319>
 - updated-physical-constants.patch from revision 536052b4
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Accepted gromacs 2020~beta1-2 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Wed, 16 Oct 2019 18:05:33 -0700
Source: gromacs
Architecture: source
Version: 2020~beta1-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2020~beta1-2) experimental; urgency=medium
 .
   * debian/patches/series: Re-enable disable-cpuinfotest.patch, as it's
 still relebant on arm64/mips* (possibly others).
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Accepted gromacs 2020~beta1-1 (source all amd64) into experimental, experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 14 Oct 2019 18:56:44 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dbgsym gromacs-mpich gromacs-mpich-dbgsym 
gromacs-openmpi gromacs-openmpi-dbgsym libgromacs-dev libgromacs5 
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Architecture: source all amd64
Version: 2020~beta1-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
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 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs5 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2020~beta1-1) experimental; urgency=medium
 .
   * New upstream beta release.
 - SONAME bump: libgromacs4 -> libgromacs5.
   * debian/control: Update B-D-Indep from python-sphinx (scheduled for
 removal soon) to python3-sphinx.
   * debian/rules: Add SIMD support for x32.
   * debian/patches/series: Remove disable-cpuinfotest.patch as a test
 to see if the problem is now solved on less-common architectures.
   * debian/copyright: Update.
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Accepted gromacs 2019.4-1 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Wed, 02 Oct 2019 13:31:30 -0700
Source: gromacs
Architecture: source
Version: 2019.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019.4-1) unstable; urgency=medium
 .
   [ Steffen Möller ]
   * debian/upstream/metadata: Added ref to conda.
 .
   [ Nicholas Breen ]
   * New upstream release.
   * debian/control: Remove Breaks/Conflicts/Replaces older than oldstable.
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Accepted grace 1:5.1.25-7 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Thu, 15 Aug 2019 20:00:53 -0700
Source: grace
Architecture: source
Version: 1:5.1.25-7
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Closes: 934662
Changes:
 grace (1:5.1.25-7) unstable; urgency=medium
 .
   [ Ondřej Nový ]
   * d/copyright: Use https protocol in Format field
   * d/changelog: Remove trailing whitespaces
 .
   [ Nicholas Breen ]
   * d/patches/font-extension-t1.diff: Search for .t1 as a font file
 extension (as seen in newer versions of Ghostscript), in addition to
 the traditional .pfa/.pfb extensions.  Thanks to Carlo Segre for the
 thorough bug report.  (Closes: #934662)
   * Update to Standards-Version 4.4.0 and debhelper compat 12.
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Accepted gromacs 2019.3-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Fri, 12 Jul 2019 18:57:43 -0700
Source: gromacs
Architecture: source
Version: 2019.3-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019.3-2) unstable; urgency=medium
 .
   * debian/patches/arm64-disable-numa-test.patch: On *some* arm64 boards,
 hwloc (1.x) reports zero NUMA cache sizes, causing a test failure.
 This disables that test on arm64 only.
 Upstream: <https://redmine.gromacs.org/issues/2366>
   * debian/patches/mpi-tests-localhost.patch: Run MPICH tests on "localhost"
 so that they pass in certain network-restricted environments, such as
 pbuilder with USENETWORK=NO set.  (buildd always worked fine.)
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Accepted gromacs 2019.3-1 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Tue, 09 Jul 2019 21:09:26 -0700
Source: gromacs
Architecture: source
Version: 2019.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019.3-1) unstable; urgency=medium
 .
   * New upstream release.
   * Bump debhelper compat version to 12 and Standards-Version to 4.4.0.
   * debian/rules: Add dh_strip_nondeterminism and dh_dwz calls.  Remove
 CMAKE_SKIP_RPATH workaround, no longer needed.
   * debian/copyright: Housekeeping update.
   * debian/*.lintian-overrides: Permit CONECT spelling, from the PDB file
 format.
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Accepted gromacs 2019.1-1 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 17 Feb 2019 09:22:14 -0800
Source: gromacs
Architecture: source
Version: 2019.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019.1-1) unstable; urgency=medium
 .
   * New upstream bugfix release.
   * On x32 only, set openmpi tests to non-failing.  They pass, but as of
 openmpi >= 3.1.3~rc1, timeout on teardown.  3.1.2 works cleanly.
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Accepted votca-tools 1.5-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Thu, 07 Feb 2019 18:57:53 -0800
Source: votca-tools
Architecture: source
Version: 1.5-2
Distribution: unstable
Urgency: high
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Closes: 921665
Changes:
 votca-tools (1.5-2) unstable; urgency=high
 .
   * libvotca-tools-dev: Additionally set Breaks/Replaces on libvotca-tools3.
 (Closes: #921665)
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Accepted votca-csg 1.5-3 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Thu, 07 Feb 2019 18:59:36 -0800
Source: votca-csg
Architecture: source
Version: 1.5-3
Distribution: unstable
Urgency: high
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Closes: 921664
Changes:
 votca-csg (1.5-3) unstable; urgency=high
 .
   * libvotca-csg-dev: Additionally set Breaks/Replaces on libvotca-csg3.
 (Closes: #921664)
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Accepted votca-csg 1.5-2 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 03 Feb 2019 19:41:04 -0800
Source: votca-csg
Architecture: source
Version: 1.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 votca-csg (1.5-2) unstable; urgency=medium
 .
   * Add missing B-D on libeigen3-dev.
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Accepted votca-csg 1.5-1 (source i386 all) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 02 Feb 2019 14:25:56 -0800
Source: votca-csg
Binary: libvotca-csg-dev libvotca-csg5 libvotca-csg5-dbgsym votca-csg 
votca-csg-dbgsym votca-csg-scripts votca-csg-tutorials
Architecture: source i386 all
Version: 1.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-csg-dev - VOTCA's coarse-graining library, development kit
 libvotca-csg5 - VOTCA's coarse-graining library
 votca-csg  - VOTCA's coarse-graining engine
 votca-csg-scripts - VOTCA's coarse-graining scripts
 votca-csg-tutorials - VOTCA's coarse-graining tutorials
Changes:
 votca-csg (1.5-1) unstable; urgency=medium
 .
   * New upstream release.
 - Remove solvematlab-syntax.patch, incorporated upstream.
   * Adding myself to uploaders.
   * SONAME bump, rename *-csg4 to *-csg5.
   * Move man pages to libvotca-csg-dev, to allow coinstallability of
 different versions of the library; set Breaks/Replaces on the old
 version of libvotca-csg4 due to the file overlap.
   * Update Standards-Version to 4.3.0.
   * Set Rules-Requires-Root: no.
   * debian/patches/tutorial-script-shebang.path: apply leading shebang to
 two tutorial scripts in the LJ1-LJ2 directory.
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Accepted votca-tools 1.5-1 (source amd64) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 01 Feb 2019 18:06:30 -0800
Source: votca-tools
Binary: libvotca-tools-dev libvotca-tools5 libvotca-tools5-dbgsym
Architecture: source amd64
Version: 1.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-tools-dev - VOTCA's tools library, development kit
 libvotca-tools5 - VOTCA's tools library
Changes:
 votca-tools (1.5-1) unstable; urgency=medium
 .
   * New upstream release.
 - Rename libvotca-tools4 to libvotca-tools5.
   * Add myself to uploaders.
   * Enable new test suite.
   * Add Build-Depends on libeigen3-dev and, for the tests,
 libboost-test-dev.
   * Minor housekeeping: update copyright years, update Standards-Version,
 set Rules-Requires-Root: no.
   * Move man pages to -dev package, allowing coinstallability of future
 library versions.
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Accepted gromacs 2019-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Fri, 01 Feb 2019 21:26:58 -0800
Source: gromacs
Architecture: source
Version: 2019-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019-2) unstable; urgency=medium
 .
   * Fix error in update-alternatives call for bash completion.
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Accepted gromacs 2019-1 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Tue, 01 Jan 2019 20:03:55 -0800
Source: gromacs
Architecture: source
Version: 2019-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Changes:
 gromacs (2019-1) unstable; urgency=medium
 .
   * New upstream final release - return uploads to unstable.
   * Install bash completion files.  Add completion files for the MPI
 variants to the update-alternatives group.
   * Remove unused GMXRC* files and the /usr/share/gromacs/shell-specific
 directory, as they are unneeded with binaries in the standard locations.
   * Bump Standards-Version to 4.3.0, no changes required.
   * Drop B-D on libtinyxml-dev, as a specific version of libtinyxml2 is
 used instead only for testing, not in shipped binaries.
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Accepted gromacs 2019~rc1-1 (source) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 16 Dec 2018 09:56:11 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs4 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2019~rc1-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs4 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2019~rc1-1) experimental; urgency=medium
 .
   * New upstream release candidate.
   * Set debhelper compat 11.
   * Re-enable several previously disabled OpenMPI tests that now work again,
 but set hurd-i386 tests to non-fatal as their failures all seem to be
 from outside sources.
   * control: Point Vcs-Git URL at debian-experimental branch specifically.
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Accepted gromacs 2019~beta3-1 (source all amd64) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 25 Nov 2018 09:17:37 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs4 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source all amd64
Version: 2019~beta3-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs4 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2019~beta3-1) experimental; urgency=medium
 .
   * New upstream beta release.
   * Move libgromacs3.lintian-overrides to libgromacs4.lintian-overrides.
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Accepted gromacs 2018.4-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 21 Nov 2018 16:01:14 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.4-1) unstable; urgency=medium
 .
   * New upstream release.
   * Bump Standards-Version to 4.2.1, no changes required.
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Accepted gromacs 2019~beta2-1 (source all amd64) into experimental, experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 08 Nov 2018 22:06:20 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs4 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source all amd64
Version: 2019~beta2-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs4 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2019~beta2-1) experimental; urgency=medium
 .
   * New upstream beta release, upload to experimental.
 - patches/reproducible-builds.patch and sphinx-version-detect.patch
   removed, equivalent functionality integrated upstream.
 - Other patches rebased.
   * Rename libgromacs3 to libgromacs4 for SONAME increment.
   * CMAKE_SKIP_RPATH causes build failures at the moment, so replace it with
 chrpath after the build.
   * Depend on, and build documentation against, local copy of libjs-mathjax.
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gromacs-dbgsym_2019~beta2-1_amd64.deb
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gromacs-mpich-dbgsym_2019~beta2-1_amd64.deb
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gromacs-mpich_2019~beta2-1_amd64.deb
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gromacs-openmpi-dbgsym_2019~beta2-1_amd64.deb
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gromacs

Accepted gromacs 2018.3-1 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Thu, 23 Aug 2018 08:55:48 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.3-1) unstable; urgency=medium
 .
   * New upstream release.
   * Bump Standards-Version to 4.2.0, no changes required.
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Accepted gromacs 2018.2-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 17 Jun 2018 16:43:08 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.2-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.2-2) unstable; urgency=medium
 .
   * Disable tests on armhf for mpich build; it seems to have a sensitivity
 to where mpich itself was built.
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Accepted gromacs 2018.2-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 16 Jun 2018 10:24:50 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.2-1) unstable; urgency=medium
 .
   [ Steffen Möller ]
   * Updated RRID in debian/upstream/metadata.
 .
   [ Nicholas Breen ]
   * New upstream release.
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Accepted mcomix 1.2.1-1.1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 29 May 2018 21:35:28 -0700
Source: mcomix
Binary: mcomix
Architecture: source
Version: 1.2.1-1.1
Distribution: unstable
Urgency: medium
Maintainer: Krzysztof Klimonda 
Changed-By: Nicholas Breen 
Description:
 mcomix - GTK+ image viewer for comic books
Closes: 866440
Changes:
 mcomix (1.2.1-1.1) unstable; urgency=medium
 .
   * Non-maintainer upload.
   * Replace Depends: python-imaging with python-pil.  (Closes: #866440)
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Accepted grace 1:5.1.25-6 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 28 Apr 2018 10:50:28 -0700
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-6
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 727796
Changes:
 grace (1:5.1.25-6) unstable; urgency=medium
 .
   * Move VCS repo to salsa.debian.org.
   * Bump to Standards-Version 4.1.4, debhelper compat 11.
   * Eliminate several hardcoded color settings, moving them to an Xresources
 configuration file, allowing user overrides.  Patch courtesy of Denis
 Danilov.  (Closes: #727796)
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Accepted gromacs 2018.1-4 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 28 Apr 2018 08:25:15 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.1-4
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.1-4) unstable; urgency=medium
 .
   * Additionally exclude MdrunUtilityMpiUnitTests on OpenMPI builds only,
 which fail erratically.
   * Set Rules-Requires-Root: no.
   * patches/sphinx-version-detect.patch: permit identification of newer
 versions of python-sphinx, which changed their --version output.
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Accepted gromacs 2018.1-3 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Tue, 24 Apr 2018 20:01:16 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Closes: 896194
Changes:
 gromacs (2018.1-3) unstable; urgency=medium
 .
   * Exchange patch from 2018.1-2 for a GTEST_FILTER exclusion in rules.
 (Closes: #896194)
   * Bump Standards-Version to 4.1.4.
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Accepted gromacs 2018.1-2 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 22 Apr 2018 14:34:48 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Closes: 896194
Changes:
 gromacs (2018.1-2) unstable; urgency=medium
 .
   * patches/openmpi-disable-gputest.patch: bypass one test on OpenMPI builds
 only, ChangingPinningPolicyRequiresCuda hangs and times out.
 (Closes: #896194)
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Accepted gromacs 2018.1-1 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 31 Mar 2018 10:12:46 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018.1-1) unstable; urgency=medium
 .
   * New upstream release.
   * Remove gtest-death-test.patch, incorporated upstream.
   * Moved VCS from alioth to salsa (thanks to Andreas Tille).
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Accepted gromacs 2018-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 20 Jan 2018 11:31:44 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018-2) unstable; urgency=medium
 .
   * Extend gtest-death-test.patch to exclude x32.  This addresses #887340
 but is not a complete fix.  Thanks to Aaron Ucko for testing assistance.
   * Increase CTest verbosity level.
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Accepted votca-csg 1.4.1-1 (source amd64 all) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 11 Jan 2018 20:12:52 -0800
Source: votca-csg
Binary: libvotca-csg-dev libvotca-csg4 votca-csg-scripts votca-csg-tutorials 
votca-csg
Architecture: source amd64 all
Version: 1.4.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-csg-dev - VOTCA's coarse-graining library, development kit
 libvotca-csg4 - VOTCA's coarse-graining library
 votca-csg  - VOTCA's coarse-graining engine
 votca-csg-scripts - VOTCA's coarse-graining scripts
 votca-csg-tutorials - VOTCA's coarse-graining tutorials
Changes:
 votca-csg (1.4.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream release.
 - Drop CheckCXXLibraryExists.patch, incorporated upstream.
 - Rename libvotca-csg3 to libvotca-csg4.
   * Tighten build dependency on libvotca-tools-dev to a 1.4 version.
   * Add B-D on libgsl-dev.
   * Bump Standards-Version to 4.1.3.
   * debian/patches/solvematlab-syntax.patch: fix syntax error in
 solve_matlab.sh.
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Accepted votca-tools 1.4.1-2 (source amd64) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 11 Jan 2018 16:18:20 -0800
Source: votca-tools
Binary: libvotca-tools-dev libvotca-tools4
Architecture: source amd64
Version: 1.4.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-tools-dev - VOTCA's tools library, development kit
 libvotca-tools4 - VOTCA's tools library
Changes:
 votca-tools (1.4.1-2) unstable; urgency=medium
 .
   * Add Breaks/Replaces on libvotca-tools3 due to filename conflicts.
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Accepted votca-tools 1.4.1-1 (source amd64) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 11 Jan 2018 14:23:15 -0800
Source: votca-tools
Binary: libvotca-tools-dev libvotca-tools4
Architecture: source amd64
Version: 1.4.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-tools-dev - VOTCA's tools library, development kit
 libvotca-tools4 - VOTCA's tools library
Changes:
 votca-tools (1.4.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream release.
   * Rename libvotca-tools3 to libvotca-tools4.
   * Bump Standards-Version to 4.1.3, no changes required.
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Accepted gromacs 2018-1 (source) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Wed, 10 Jan 2018 22:23:18 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018-1) unstable; urgency=low
 .
   * New upstream release.
 - Remove test_GMX_ALIGNED.patch, incorporated.
 - Update debian/man/*mdrun* man pages.
   * Bump Standards-Version to 4.1.3.
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Accepted gromacs 2018~rc1-3 (source) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 03 Jan 2018 20:58:25 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018~rc1-3
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018~rc1-3) experimental; urgency=medium
 .
   * patches/gtest-death-test.patch: disable EXPECT_DEATH tests if
 unavailable on that platform.
   * patches/mdrun-test-timeout.patch: increase timeout for integration test
 (using mdrun) from 120 to 600 seconds, to help prevent termination on
 slower buildds.
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Accepted gromacs 2018~rc1-2 (source) into experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Wed, 27 Dec 2017 12:56:20 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018~rc1-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018~rc1-2) experimental; urgency=medium
 .
   * Apply upstream patch <https://gerrit.gromacs.org/#/c/7395/> to address
 BasedefinitionsTest.GmxAlignedDeclaresAlignedVariable failures on non-
 Intel architectures.
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Accepted gromacs 2018~rc1-1 (source) into experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Tue, 26 Dec 2017 23:10:55 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2018~rc1-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
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 .
   * New upstream release candidate.
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Accepted gromacs 2018~beta3-1 (source all amd64) into experimental, experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 24 Dec 2017 10:35:12 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs3 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source all amd64
Version: 2018~beta3-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs3 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2018~beta3-1) experimental; urgency=medium
 .
   [ Andreas Tille ]
   * New upstream version (beta2)
   * Moved packaging from SVN to Git
 .
   [ Nicholas Breen ]
   * New upstream release (beta3).
   * Explicitly set MPIEXEC for the two different MPI implementations, to
 prevent mismatches via the alternatives system.  Also B-D on mpich,
 providing /usr/bin/mpiexec.mpich for tests.
   * Update Standards-Version to 4.1.2.
   * Remove obsolete zero byte file lintian overrides.
   * SONAME bump: rename libgromacs2 to libgromacs3.
   * Set GMX_EXTERNAL_ZLIB=ON to prevent it from opportunistically linking
 statically.
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gromacs

Accepted gromacs 2016.4-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 17 Sep 2017 10:29:19 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2016.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.4-1) unstable; urgency=medium
 .
   * New upstream release.
   * Bump Standards-Version to 4.1.0.  Set Priority to optional.
   * Drop Multi-Arch: same for libgromacs-dev, it seems to have some per-arch
 conflicts from autogenerated files.
   * Depend on sse2-support [any-i386] | neon-support [armhf], for the minimum
 useful levels of SIMD support on those architectures.  Also enable NEON
 for arm64.
   * Set hardening options BINDNOW and PIE.
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Accepted grace 1:5.1.25-5 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Fri, 30 Jun 2017 09:16:09 -0700
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-5
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.25-5) unstable; urgency=medium
 .
   * Typo fix in control ("gconf" -> "gconf2").
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Accepted gromacs 2016.3-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 18 Jun 2017 13:32:39 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-mpich 
gromacs-openmpi
Architecture: source
Version: 2016.3-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.3-2) unstable; urgency=medium
 .
   * Upload to unstable after the stretch release.
   * Remove the old gromacs-dev metapackage, now that it's passed one stable
 release with libgromacs-dev available.  Also remove some old Breaks:
 from well before oldstable.
   * Set Multi-Arch: foreign for gromacs-data, M-A: same for gromacs-dev and
 libgromacs2.
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Accepted grace 1:5.1.25-4 (source) into unstable

[Nicholas Breen]

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Date: Sun, 18 Jun 2017 13:04:04 -0700
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-4
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 863872
Changes:
 grace (1:5.1.25-4) unstable; urgency=medium
 .
   * Don't run dh_gconf; schemas are now registered by triggers and the
 thumbnailing is an optional feature, so a hard Depends: is not
 desirable.  Instead, add an explicit Suggests: gconf2.
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   * Update Standards-Version to 4.0.0 and bump debhelper compat level to 10,
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Accepted gromacs 2016.3-1 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Wed, 15 Mar 2017 21:18:12 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016.3-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.3-1) experimental; urgency=medium
 .
   * New upstream release.
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Accepted gromacs 2016.2-1 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Wed, 08 Feb 2017 17:58:11 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016.2-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.2-1) experimental; urgency=medium
 .
   * New upstream release.  Uploaded to experimental during freeze.
   * Remove dh_shlibdeps workaround introduced in 2016~rc1-3, which is fixed
 via the MPI implementations now.
   * Remove old .NOTPARALLEL restriction when building.
   * Use chrpath to remove RUNPATH on OpenMPI binaries -- see
 <https://github.com/open-mpi/ompi/issues/521>.
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Accepted grace 1:5.1.25-3 (source) into unstable

[Nicholas Breen]

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Date: Mon, 23 Jan 2017 09:47:16 -0800
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-3
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 810181
Changes:
 grace (1:5.1.25-3) unstable; urgency=medium
 .
   * Drop B-D alternative on libpng12-dev.  (Closes: #810181)
   * Update Standards-Version to 3.9.8, no changes required.
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Accepted gromacs 2016.1-2 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Sun, 30 Oct 2016 17:12:11 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.1-2) unstable; urgency=medium
 .
   * Disable OpenMPI tests on hurd-i386/kfreebsd-*.  This appears related to
 <https://bugs.debian.org/839387>.
   * Move to debhelper compat version 10, requiring no changes.
   * Drop some obsolete lintian overrides, and add a pair for zero-length
 documentation files not yet shipped.
   * Update debian/copyright.
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Accepted gromacs 2016.1-1 (source) into unstable

[Nicholas Breen]

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Date: Fri, 28 Oct 2016 19:14:43 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016.1-1) unstable; urgency=medium
 .
   * New upstream release.
   * rules: Build without SIMD on ppc64.
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Accepted gromacs 2016-3 (source) into unstable

[Nicholas Breen]

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Date: Thu, 08 Sep 2016 19:38:53 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Closes: 834991 837061
Changes:
 gromacs (2016-3) unstable; urgency=medium
 .
   * rules: Adjust SIMD detection logic to set GMX_SIMD=None by default, and
 enable it case-by-case only on those architectures where it's safe to
 do so.  (Closes: #834991)
   * Work around OpenMPI 2 test failures:  (Closes: #837061)
 - control: Add openmpi-bin to Build-Depends.
 - rules: Apply the OMPI_MCA_plm_rsh_agent workaround from #494046.
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Accepted votca-csg 1.3.0-3 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Fri, 19 Aug 2016 10:34:58 +0200
Source: votca-csg
Binary: libvotca-csg-dev libvotca-csg3 votca-csg-scripts votca-csg-tutorials 
votca-csg
Architecture: source
Version: 1.3.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-csg-dev - VOTCA's coarse-graining library, development kit
 libvotca-csg3 - VOTCA's coarse-graining library
 votca-csg  - VOTCA's coarse-graining engine
 votca-csg-scripts - VOTCA's coarse-graining scripts
 votca-csg-tutorials - VOTCA's coarse-graining tutorials
Changes:
 votca-csg (1.3.0-3) unstable; urgency=medium
 .
   * Team upload.
   * debian/patches/CheckCXXLibraryExists.patch: Import patch to fix FTBFS
 with cmake >= 3.4.
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Accepted gromacs 2016-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Fri, 19 Aug 2016 08:52:08 +0200
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Closes: 834786
Changes:
 gromacs (2016-2) unstable; urgency=medium
 .
   * Accept DEB_BUILD_OPTIONS=nocheck for the "build-openmpi" target, which
 was missing and causing m68k build failures.  (Closes: #834786)
   * patches/hurd-disable-numa-test.patch: On hurd-i386 only, this test fails
 for what seem to be detection limitations rather than an actual problem,
 so disable the test conditionally on that architecture.
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Accepted votca-csg 1.3.0-2 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Thu, 18 Aug 2016 09:33:32 +
Source: votca-csg
Binary: libvotca-csg-dev libvotca-csg3 votca-csg-scripts votca-csg-tutorials 
votca-csg
Architecture: source
Version: 1.3.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 libvotca-csg-dev - VOTCA's coarse-graining library, development kit
 libvotca-csg3 - VOTCA's coarse-graining library
 votca-csg  - VOTCA's coarse-graining engine
 votca-csg-scripts - VOTCA's coarse-graining scripts
 votca-csg-tutorials - VOTCA's coarse-graining tutorials
Closes: 821734
Changes:
 votca-csg (1.3.0-2) unstable; urgency=medium
 .
   * Team upload.
   * debian/control: change B-D on gromacs-dev to libgromacs-dev.
   * debian/control: Add Replaces/Breaks for clean upgrades from
 libvotca-csg2* to csg[3]*.  (Closes: #821734)
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Accepted gromacs 2016-1 (source) into unstable

[Nicholas Breen]

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Date: Tue, 09 Aug 2016 06:06:12 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016-1) unstable; urgency=low
 .
   * New upstream release, upload to unstable.
 - Remove patches/gmxManageSimd.patch, incorporated upstream.
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Accepted gromacs 5.1.3-1 (source) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 23 Jul 2016 17:19:36 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 5.1.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (5.1.3-1) unstable; urgency=medium
 .
   * New upstream maintenance release.
 - Remove patches/spelling.patch and empty-man7-directory.patch,
   incorporated upstream.
   * control: Update Standards-Version to 3.9.8, no changes required.
   * rules: Apply dh_shlibdeps workaround for #831442.
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Accepted gromacs 2016~rc1-3 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Sat, 16 Jul 2016 10:17:07 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016~rc1-3
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016~rc1-3) experimental; urgency=medium
 .
   * Workaround for #831442: manually prepend /usr/lib/ to search
 path for dh_shlibdeps -pgromacs-mpich.
   * Set SIMD extensions to VMX on ppc64el, already the minimum requirement
 for that architecture.  Disable SIMD on ppc64 due to lower CPU baseline
 requirements and the lack of double-precision support in basic VMX.
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Accepted gromacs 2016~rc1-2 (source) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 15 Jul 2016 17:44:18 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016~rc1-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016~rc1-2) experimental; urgency=medium
 .
   * OpenMPI now supported on all relevant architectures, so gromacs-openmpi
 changed to "Architecture: any" and arch-specific handling removed.
   * Revive part of the test patch from beta2-2 as disable-cpuinfotest.patch,
 as the issue is not fully resolved upstream.
   * For SSE settings, use DEB_HOST_ARCH_CPU instead of DEB_HOST_ARCH.
   * patches/gmxManageSimd.patch: Correctly pass -msse2 to compiler flags.
 <http://redmine.gromacs.org/issues/2008>
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Accepted gromacs 2016~rc1-1 (source all amd64) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 11 Jul 2016 18:28:25 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 2016~rc1-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016~rc1-1) experimental; urgency=medium
 .
   * First upstream release candidate.
 - Drop patches from beta2-2, incorporated or fixed upstream.
   * Switch from building with libxml2 to libtinyxml.
   * rules: Convert deprecated debhelper -s flags to -a.
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Accepted gromacs 2016~beta2-2 (source) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Fri, 17 Jun 2016 06:40:18 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 2016~beta2-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016~beta2-2) experimental; urgency=medium
 .
   * Two patches to address test suits failures:
 - numerically-unstable-gaussian-test.patch: Backport a fix from git
   master branch to address Gaussian test failures on all i386
   platforms.  (http://redmine.gromacs.org/issues/1986)
 - disable-hardware-topology-tests.patch: Two CPU info tests cause hard
   failures that should probably just be warnings, so disable those tests
   for now.  (http://redmine.gromacs.org/issues/1987)
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Accepted gromacs 2016~beta2-1 (source all amd64) into experimental, experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 07 Jun 2016 14:20:10 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs2 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 2016~beta2-1
Distribution: experimental
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs2 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (2016~beta2-1) experimental; urgency=low
 .
   * Beta for major new upstream release.  New date-based versioning system.
 - SONAME bump: package rename, libgromacs1 -> libgromacs2
 - spelling and empty-man7-directory patches incorporated upstream.
 - Refresh other patches.
 - Versioned Depends: on python-sphinx (>= 1.4) for new imgmath
   extension.
   * Update Standards-Version to 3.9.8, no changes required.
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Accepted gromacs 5.1.2-3 (source) into experimental

[Nicholas Breen]

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Format: 1.8
Date: Thu, 21 Apr 2016 17:35:41 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 5.1.2-3
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (5.1.2-3) experimental; urgency=medium
 .
   * Add LD_LIBRARY_PATH overrides to unit tests.
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Accepted gromacs 5.1.2-2 (source) into experimental

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Mon, 18 Apr 2016 21:04:31 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 5.1.2-2
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (5.1.2-2) experimental; urgency=medium
 .
   * Run upstream unit tests.  Supports DEB_BUILD_OPTIONS=nocheck bypass.
   * Use rdfind/symlinks to reduce internal duplication in doxygen output.
   * Only build process changes in this upload - uploading to
 experimental as a safety.
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Accepted grace 1:5.1.25-2 (source) into unstable

[Nicholas Breen]

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Date: Sun, 28 Feb 2016 16:18:39 -0800
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-2
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.25-2) unstable; urgency=medium
 .
   * Remove grace.menu (and grace-menu.xpm) per TC decision #741573.
   * Update Standards-Version to 3.9.7, no changes required.
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Accepted gromacs 5.1.2-1 (source) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 28 Feb 2016 13:31:21 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source
Version: 5.1.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Closes: 815678
Changes:
 gromacs (5.1.2-1) unstable; urgency=medium
 .
   * New upstream release.
   * Add hppa, s390x, x32 to list of architectures for gromacs-openmpi.
 In turn, increase required version of libopenmpi-dev to >= 1.10.2-7.
   * Add new patches/reproducible-builds.patch for... reproducible builds.
 This is preliminary work and may not be complete.
   * doxygen.patch: work around FTBFS with doxygen >= 1.8.11 (no problems
 with previous 1.8.9).  (Closes: #815678)
   * spelling.patch: Additional fixes.
   * Update Standards-Version to 3.9.7, no changes required.
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Accepted gromacs 5.1.1-2 (source all) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 22 Dec 2015 17:18:40 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source all
Version: 5.1.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Closes: 808659
Changes:
 gromacs (5.1.1-2) unstable; urgency=medium
 .
   * Replace compiler calls to "mpic++" with "mpicxx".  MPICH >= 3.2 no
 longer ships mpic++ links.  (Closes: #808659)
   * Remove obsolete build dependency on libgsl0-dev.
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Accepted gromacs 5.1.1-1 (source all amd64) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Mon, 09 Nov 2015 17:24:02 -0800
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.1.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Changes:
 gromacs (5.1.1-1) unstable; urgency=medium
 .
   * New upstream release.
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Accepted xbae 4.60.4-7 (source amd64) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 18 Oct 2015 10:52:03 -0700
Source: xbae
Binary: libxbae-dev libxbae4m
Architecture: source amd64
Version: 4.60.4-7
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 libxbae-dev - Xbae Matrix Widget development package
 libxbae4m  - Xbae Matrix Widget libraries
Closes: 797871
Changes:
 xbae (4.60.4-7) unstable; urgency=medium
 .
   * Apply patch for reproducible builds, courtesy of Chris Lamb.
 (Closes: #797871)
   * Update Standards-Version to 3.9.6, no changes required.
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Accepted gromacs 5.1-1 (source all amd64) into unstable, unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 01 Oct 2015 17:38:08 -0700
Source: gromacs
Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev 
gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.1-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - Dummy package for libgromacs-dev
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
 libgromacs-dev - GROMACS molecular dynamics sim, development kit
 libgromacs1 - GROMACS molecular dynamics sim, shared libraries
Closes: 715934 797744
Changes:
 gromacs (5.1-1) unstable; urgency=low
 .
   * New upstream release.  This release completes the transition to "gmx"
 as the sole binary to replace all the former g_* commands, and the
 compatibility symlinks have been removed.  Standalone mdrun_mpi
 programs in gromacs-mpich and gromacs-openmpi are unaffected.
 - gmx anadock no longer crashes on invalid input.  (Closes: #715934)
   * Some package reshuffling: gromacs-dev becomes libgromacs-dev, and the
 shared library gets split out into libgromacs1.  (Closes: #797744)
 Upload priority set to "low" due to the unusually extensive restructure.
   * Remove gromacs-dev.preinst, only needed for upgrades from well before
 the version in squeeze.
   * Lots more documentation!  PDF manual is built once again, and doxygen
 output for developer use is included.  Several Build-Depends-Indep
 entries added to support this.
 - patches/manpage-hyphenation.patch removed, no longer needed.
 - mdrun_mpi.{mpich,openmpi}.1 updated.
   * debian/control: apply wrap-and-sort.
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Accepted gromacs 5.0.6-1 (source all) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 26 Jul 2015 13:58:11 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all
Version: 5.0.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.6-1) unstable; urgency=medium
 .
   * New upstream release.
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Accepted gromacs 5.0.5-1 (source all) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 16 May 2015 11:30:11 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all
Version: 5.0.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.5-1) unstable; urgency=medium
 .
   * New upstream release.
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Accepted gromacs 5.0.4-2 (source all amd64) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Mon, 27 Apr 2015 10:00:09 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0.4-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.4-2) unstable; urgency=medium
 .
   * Post-Jessie upload to unstable, no other changes.
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Accepted grace 1:5.1.25-1 (source) into unstable

[Nicholas Breen]

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Date: Tue, 17 Feb 2015 09:50:49 -0800
Source: grace
Binary: grace
Architecture: source
Version: 1:5.1.25-1
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 775749
Changes:
 grace (1:5.1.25-1) unstable; urgency=medium
 .
   * New upstream release.
 - No longer clears set comments on load.  (Closes: #775749)
   * copyright: Add 2015 where relevant, disambiguate short license names.
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Accepted grace 1:5.1.24-3 (source amd64) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sun, 04 Jan 2015 09:29:02 -0800
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.24-3
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 774558
Changes:
 grace (1:5.1.24-3) unstable; urgency=medium
 .
   * Switch to "interest-noawait" triggers to avoid a possible configuration
 loop with gsfonts.  (Closes: #774558)
   * Update Standards-Version to 3.9.6, no changes required.
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Accepted gromacs 5.0.4-1 (source all amd64) into experimental

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 21 Dec 2014 12:54:35 -0800
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0.4-1
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.4-1) experimental; urgency=medium
 .
   * New upstream release.  Uploaded to experimental during the freeze.
 Minor patch rebasing only.
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Accepted gromacs 5.0.2-1 (source all i386) into unstable

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Sun, 05 Oct 2014 10:29:34 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all i386
Version: 5.0.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.2-1) unstable; urgency=medium
 .
   * New upstream release.
   * Update Standards-Version to 3.9.6, no changes required.
   * Update rules to build GPU-accelerated packages, with thanks to
 Steffen Möller.
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Accepted grace 1:5.1.24-2 (source i386) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 13 Sep 2014 16:53:32 -0700
Source: grace
Binary: grace
Architecture: source i386
Version: 1:5.1.24-2
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.24-2) unstable; urgency=medium
 .
   * Add Build-Depends on texlive-fonts-recommended.
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Accepted grace 1:5.1.24-1 (source amd64) into unstable

[Nicholas Breen]

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Format: 1.8
Date: Sat, 13 Sep 2014 15:48:16 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.24-1
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.24-1) unstable; urgency=medium
 .
   * New upstream release.
 - Remove patches/cephes-license.diff (incorporated upstream), rebase
   other patches as necessary.
 - Fixes input of non-ASCII text under UTF-8 locales. (LP: #1276783)
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Accepted gromacs 5.0.1-1 (source all amd64) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 06 Sep 2014 11:20:17 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0.1-1) unstable; urgency=medium
 .
   * New upstream release.
   * Rebase patches involving man pages (moved from share/man to doc/man in
 tarball), drop 20_random123_platforms.patch (incorporated upstream),
 and remove the leading numbers from all patch filenames (a leftover from
 dpatch).
   * man/mdrun_mpi.*: Update .TH line.
   * rules: Set CMAKE_RULE_MESSAGES=OFF to work around blhc false positives
 for "W-compiler-flags-hidden".
   * Move debian/upstream to debian/upstream/metadata.
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Accepted gromacs 5.0-3 (source all amd64) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Sun, 24 Aug 2014 20:02:24 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0-3) unstable; urgency=medium
 .
   * Upload to unstable.
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Accepted grace 1:5.1.23-9 (source amd64) into unstable

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 15 Aug 2014 17:33:55 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.23-9
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Closes: 758237
Changes:
 grace (1:5.1.23-9) unstable; urgency=medium
 .
   * copyright: Convert to DEP-5 format and overhaul information.  Include
 e-mail from cephes author regarding its licensing; thanks to Helen
 Faulkner for driving that for the labplot packages many years ago.
 (Closes: #758237)
   * patches/cephes-license.diff: Additionally add cephes/COPYING to the
 unpacked source tree.
   * README.Debian: Update epstopdf information and alioth URL.
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Accepted jigl 2.0.1+20060126-5 (source all)

[Nicholas Breen]

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Date: Sun, 13 Jul 2014 17:04:54 -0700
Source: jigl
Binary: jigl
Architecture: source all
Version: 2.0.1+20060126-5
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 jigl   - Generates a static html photo gallery from one or more directorie
Changes:
 jigl (2.0.1+20060126-5) unstable; urgency=medium
 .
   * Switch Recommends (for /usr/bin/rotate) from csh to tcsh.  Add
 libjpeg-progs, which supplies jpegtran.
   * Update Standards-Version to 3.9.5, no changes needed.
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Accepted gromacs 4.6.6-1 (source all amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Mon, 07 Jul 2014 09:19:44 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 4.6.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (4.6.6-1) unstable; urgency=medium
 .
   * New upstream release.  Final release of the 4.6 series.
   * debian/copyright: Updated.
   * patches/21_hurd.patch: Incorporated upstream, patch removed.
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Accepted gromacs 5.0-2 (source all amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 02 Jul 2014 20:13:01 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0-2
Distribution: experimental
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (5.0-2) experimental; urgency=low
 .
   * Add 20_random123_platforms.patch to disable architecture check from
 external Random123 code.
   * Drop discussion of shared libraries from README.Debian for
 gromacs-{mpich,openmpi}.
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Accepted gromacs 5.0-1 (source all amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 02 Jul 2014 17:35:18 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 5.0-1
Distribution: experimental
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Closes: 715935
Changes:
 gromacs (5.0-1) experimental; urgency=low
 .
   * New upstream release, experimental upload.
 - g_sigeps / gmx sigeps command line handling no longer crashes on
   invalid input (Closes: #715935).
   * Rebase existing patches.  Add new patches:
 - 31_manpage_hyphenation.patch: Some parts of the man page generation
   get the hyphen/dash separation right, some don't.  A temporary fix
   pending significant overhaul of the man page system.
   <http://redmine.gromacs.org/issues/1437>
 - 32_spelling.patch: Correction of minor spelling errors.
   * man/g_{dos,kinetics,luck}.1: Incorporated upstream, removed.
   * man/gmx.1: Rudimentary man page written and added.
   * man/mdrun_mpi.*.1: Updated with text from upstream gmx-mpich.1.
   * rules: Updates for MPI builds and assorted upstream changes.
   * gromacs-data.lintian-overrides, source/lintian-overrides: Removed.
   * Add Build-Depends on external libboost-dev.
   * Switch away from hardening-wrapper in favor of dpkg-buildflags.
   * Update copyright file.
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Accepted grace 1:5.1.23-8 (source amd64)

[Nicholas Breen]

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Hash: SHA256

Format: 1.8
Date: Thu, 26 Jun 2014 20:58:11 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.23-8
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.23-8) unstable; urgency=medium
 .
   * Upload to unstable with libxmhtml-dev transition, no further changes.
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Accepted gromacs 4.6.5-2 (source all amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Mon, 16 Jun 2014 18:48:37 -0700
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 4.6.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description:
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Changes:
 gromacs (4.6.5-2) unstable; urgency=medium
 .
   * Update list of OpenMPI architectures to include mips*, arm64.
   * patches/21_hurd.patch: Cherry-pick upstream commit 2c81d3ab to build
 shared libraries on GNU/Hurd.
   * watch: Extend regex to detect -beta, -pre, _pre, *and* -rc suffixes.
   * Remove chrpath workaround, no longer needed as of mpich 3.0.4-6.
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Accepted grace 1:5.1.23-7 (source amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
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Format: 1.8
Date: Mon, 16 Jun 2014 18:02:18 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.23-7
Distribution: experimental
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 grace  - XY graphing and plotting tool
Changes:
 grace (1:5.1.23-7) experimental; urgency=medium
 .
   * control: Transition to libxmhtml-dev, currently only in experimental.
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Accepted xbae 4.60.4-6 (source i386)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 09 Jun 2014 17:30:55 -0700
Source: xbae
Binary: libxbae-dev libxbae4m
Architecture: source i386
Version: 4.60.4-6
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description:
 libxbae-dev - Xbae Matrix Widget development package
 libxbae4m  - Xbae Matrix Widget libraries
Closes: 736667
Changes:
 xbae (4.60.4-6) unstable; urgency=medium
 .
   * Use dh-autoreconf for support of new architectures.  Patch courtesy of
 Daniel T Chen.  (Closes: #736667)
   * Four tiny new patches fixing compiler warnings and code typos:
 - implicit-declaration.diff for examples/matrix/matrix.c
 - pointer-from-integer.diff for examples/tests/leak2.c
 - fix-row-label-buttons.diff for src/Actions.c , patch picked from
   <http://sourceforge.net/p/xbae/patches/2/>
 - build-failures.diff for doc/images/Makefile.am and configure.in,
   patch adapted in part from #736667 as well
   * Drop libtool-as-needed.diff in favor of dh_autoreconf --as-needed.
   * Update Standards-Version to 3.9.5, no changes required.
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Accepted grace 1:5.1.23-6 (source i386)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 29 Mar 2014 11:20:00 -0700
Source: grace
Binary: grace
Architecture: source i386
Version: 1:5.1.23-6
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description: 
 grace  - XY graphing and plotting tool
Changes: 
 grace (1:5.1.23-6) unstable; urgency=medium
 .
   * control: Also add in Build-Deps for libxt-dev, libxext-dev, libxau-dev,
 libxaw7-dev.  Hooray for unspecified transitive dependencies.
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Accepted grace 1:5.1.23-5 (source amd64)

[Nicholas Breen]

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Format: 1.8
Date: Sat, 29 Mar 2014 10:36:07 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.23-5
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description: 
 grace  - XY graphing and plotting tool
Closes: 742890
Changes: 
 grace (1:5.1.23-5) unstable; urgency=medium
 .
   * control: Reverse order of xmhtml1-dev | libxmhtml-dev Build-Dep.
 (Closes: #742890)
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Accepted grace 1:5.1.23-4 (source amd64)

[Nicholas Breen]

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Format: 1.8
Date: Thu, 27 Mar 2014 20:12:01 -0700
Source: grace
Binary: grace
Architecture: source amd64
Version: 1:5.1.23-4
Distribution: unstable
Urgency: medium
Maintainer: Nicholas Breen 
Changed-By: Nicholas Breen 
Description: 
 grace  - XY graphing and plotting tool
Closes: 638760
Changes: 
 grace (1:5.1.23-4) unstable; urgency=medium
 .
   * control: XmHTML development package will change to libxmhtml-dev soon;
 modify Build-Depends to libxmhtml-dev | xmhtml1-dev in preparation.
   * rules: Switch back to embedded convenience copy of T1lib.
 (Closes: #638760)
 - control: Drop B-D on t1lib-dev.
 - README.source: add some notes about this.
 - patches/t1lib-general.diff: Incorporate all available patches from
   former Debian distribution of T1lib.
 - grace.lintian-overrides: Suppress relevant embedded-library error.
   * control:  Update Standards-Version to 3.9.5, no changes required.
   * grace.lintian-overrides: Drop workaround for lintian #673112.
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Accepted gromacs 4.6.5-1 (source all amd64)

[Nicholas Breen]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 09 Dec 2013 10:40:36 -0800
Source: gromacs
Binary: gromacs gromacs-data gromacs-dev gromacs-mpich gromacs-openmpi
Architecture: source all amd64
Version: 4.6.5-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team 
Changed-By: Nicholas Breen 
Description: 
 gromacs- Molecular dynamics simulator, with building and analysis tools
 gromacs-data - GROMACS molecular dynamics sim, data and documentation
 gromacs-dev - GROMACS molecular dynamics sim, development kit
 gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
 gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization
Closes: 725013
Changes: 
 gromacs (4.6.5-1) unstable; urgency=low
 .
   * New upstream release.
   * rules: Override autodetection of CPU extensions on amd64 and i386;
 force to SSE2 only, and provide new DEB_BUILD_OPTIONS=cpuopt flag to
 re-enable autodetection for local builds.  (Closes: #725013)
   * rules: Fix misplaced COPYING symlink in gromacs-data.
   * source/lintian-overrides: Add overrides for outstanding lintian bugs
 #729096 (newer policy version), #724866 (libmpich-dev not virtual).
   * patches/20_manpages.patch: Fix formatting errors in the NAME line of
 several man pages.
   * gromacs-data.doc-base: Change root to getting_started.html.  The
 shipped HTML documentation is slowly being eliminated in favor of a
 wiki on gromacs.org.
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