Re: MIA upload
Hello Andreas, > Great. As you might have noticed I did some changes - please check out > the commit logs. I see. > > > This package provides real image processing funcionality and is the > > biggest package I'm currently preparing. i.e. this is the one that > > should probably end up in on of the tasks files. > > I guess candidates would be mia2-bin for imaging and libmia-2.0-dev for > imaging-dev right? Yes. > From my personal taste I would prefer mia2-tools or > even mia-tools (I personally do not see a need to duplicate the version > number in the package name - but perhaps there is some good reason for > it). I just have the feeling that '-bin' is quite rarely used and > '-tools' is somehow common for tools using the library features. I'll change this thirst thing on Monday, there was also no real reason to use the version number, i.e. I will remove it. > Moreover the shotr description of mia-2.0-dev is not optimal. It would > be better to have some short explanation in it rather than refering to > the package featuring the dynamic library and thus forcing the reader to > dig into the description of another package. Okay, I will change this too. > I tried to git-buildpackage mia and got: > > $ git-buildpackage > dh clean --parallel >dh_testdir -O--parallel >dh_auto_clean -O--parallel >dh_clean -O--parallel > gbp:info: Orig tarball 'mia_2.0.7.orig.tar.xz' not found at '../tarballs/' > paranoia check failed on params from delta (-z -9) at /usr/bin/pristine-xz > line 195. > pristine-tar: command failed: pristine-xz --no-verbose --no-debug --no-keep > genxz /tmp/pristine-tar.eIfAuN7sWh/wrapper > /tmp/pristine-tar.tATBi4qGo1/mia_2.0.7.orig.tar.xz.tmp > pristine-tar: failed to generate tarball > gbp:error: Couldn't checkout "mia_2.0.7.orig.tar.xz": /usr/bin/pristine-tar > returned 255 Somehow this is haunting us :/. I just set up a completely new and clean Debian-unstable VM and then ... git-buildpackage dh clean --parallel dh_testdir -O--parallel dh_auto_clean -O--parallel dh_clean -O--parallel gbp:info: mia_2.0.7.orig.tar.xz does not exist, creating from 'upstream/2.0.7' dpkg-buildpackage -rfakeroot -D -us -uc -i -I dpkg-buildpackage: Quellpaket mia dpkg-buildpackage: Quellversion 2.0.7-1 dpkg-buildpackage: Quellen geändert durch Gert Wollny \ dpkg-source -i -I --before-build mia dpkg-buildpackage: Host-Architektur amd64 ... and it creates mia_2.0.7.orig.tar.xz in the parent directory. I noted that the "gbp:info" message is different, and I seem to remember that I also saw the "../tarballs" part before my vacations. In other words, it could be we have another version conflict like with pristine-tar before. I used git-buildpackage version 0.6.0~git20121124. Best Gert -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/1355621728.20521.17.camel@middleearth
Re: MIA upload
Hi Gert, On Fri, Dec 14, 2012 at 04:58:09PM +0100, Gert Wollny wrote: > Hello, > > I've uploaded the MIA package to git.debian.org/git/debian-med/mia.git Great. As you might have noticed I did some changes - please check out the commit logs. > This package provides real image processing funcionality and is the > biggest package I'm currently preparing. i.e. this is the one that > should probably end up in on of the tasks files. I guess candidates would be mia2-bin for imaging and libmia-2.0-dev for imaging-dev right? From my personal taste I would prefer mia2-tools or even mia-tools (I personally do not see a need to duplicate the version number in the package name - but perhaps there is some good reason for it). I just have the feeling that '-bin' is quite rarely used and '-tools' is somehow common for tools using the library features. Moreover the shotr description of mia-2.0-dev is not optimal. It would be better to have some short explanation in it rather than refering to the package featuring the dynamic library and thus forcing the reader to dig into the description of another package. > To compile you need the latest Debian unstable, because it requires > libvistaio-dev, which was just uploaded, and libnlopt-dev (>= 2.3) > that was also only uploaded two days ago (main reason for this > dependency is that it fixes #695659). Its default to use latest unstable for building packages anyway. > Currently, the package has two lintian-overrides: > > * package-name-doesnt-match-soname > > After some consideration I decided that it really doesn't make much > sense to split the librraies into different packages: MIA uses > plug-ins and command line program - and lots of them, Splitting the > libraries would mean sorting out which plug-in /command line program > requires which library in the *.install files. To make this without > specifying each file separately would require rethinking the whole > module naming scheme, and this is something I wouldn't want to do > right now. That's OK. > * hardening-no-fortify-functions > > Initially this error actually made me fix the compilation flags, but > there are still a lot warnings left. > > Most of them are memset, memcpy, and memmove, and according to > http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=673112 > they should probably ignored. Yes. > Since I integrated the changes needed to satisfy lintian, I created > a new upstream version. Should I update the ITP bug? There is no real need to do so. The sense of the ITP bug is to inform other developers that you are working on this. This is not changed by the fact that a new version is out. I tried to git-buildpackage mia and got: $ git-buildpackage dh clean --parallel dh_testdir -O--parallel dh_auto_clean -O--parallel dh_clean -O--parallel gbp:info: Orig tarball 'mia_2.0.7.orig.tar.xz' not found at '../tarballs/' paranoia check failed on params from delta (-z -9) at /usr/bin/pristine-xz line 195. pristine-tar: command failed: pristine-xz --no-verbose --no-debug --no-keep genxz /tmp/pristine-tar.eIfAuN7sWh/wrapper /tmp/pristine-tar.tATBi4qGo1/mia_2.0.7.orig.tar.xz.tmp pristine-tar: failed to generate tarball gbp:error: Couldn't checkout "mia_2.0.7.orig.tar.xz": /usr/bin/pristine-tar returned 255 $ git branch * master pristine-tar upstream Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20121215155331.gb11...@an3as.eu
Re: please upgrade libbio-graphics-perl
Le 12/15/12 9:37 AM, Charles Plessy a écrit : > Le Sat, Dec 15, 2012 at 09:15:59AM +0100, olivier.sal...@codeless.fr a écrit : >> could you please upgrade libbio-graphics-perl? New GBrowse needs at >> least v2.31. >> >> If you do not have time, please tell me and I 'll try to update it myself. > Hi Olivier, > > thank you for the offer. I caught cold and have a bit of difficulty to focus, > so I would be grateful if you would updated it. May I ask you to import > version 2.30 in the Git repository before version 2.31, and to either send the > build logs or commit them to the "meta" branch ? > > Bon week-end, package has been updated to version 2.31, with logs in meta. I will update to 2.32 later on. Olivier -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/50cc4e64.5000...@codeless.fr
Re: please upgrade libbio-graphics-perl
Le Sat, Dec 15, 2012 at 09:39:54AM +0100, olivier.sal...@codeless.fr a écrit : > Le 12/15/12 9:37 AM, Charles Plessy a écrit : > > Le Sat, Dec 15, 2012 at 09:15:59AM +0100, olivier.sal...@codeless.fr a > > écrit : > >> could you please upgrade libbio-graphics-perl? New GBrowse needs at > >> least v2.31. > >> > >> If you do not have time, please tell me and I 'll try to update it myself. > > Hi Olivier, > > > > thank you for the offer. I caught cold and have a bit of difficulty to > > focus, > > so I would be grateful if you would updated it. May I ask you to import > > version 2.30 in the Git repository before version 2.31, > Version 2.32 is available now, I need to upgrade with each intermediate > version? Maybe it is mostly cosmetic, but if you do not mind, I would appreciate :) Cheers, -- Charles -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20121215090159.gg12...@falafel.plessy.net
Re: please upgrade libbio-graphics-perl
Le 12/15/12 9:37 AM, Charles Plessy a écrit : > Le Sat, Dec 15, 2012 at 09:15:59AM +0100, olivier.sal...@codeless.fr a écrit : >> could you please upgrade libbio-graphics-perl? New GBrowse needs at >> least v2.31. >> >> If you do not have time, please tell me and I 'll try to update it myself. > Hi Olivier, > > thank you for the offer. I caught cold and have a bit of difficulty to focus, > so I would be grateful if you would updated it. May I ask you to import > version 2.30 in the Git repository before version 2.31, Version 2.32 is available now, I need to upgrade with each intermediate version? > and to either send the > build logs or commit them to the "meta" branch ? sure > > Bon week-end, > -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/50cc375a.2070...@codeless.fr
Re: please upgrade libbio-graphics-perl
Le Sat, Dec 15, 2012 at 09:15:59AM +0100, olivier.sal...@codeless.fr a écrit : > > could you please upgrade libbio-graphics-perl? New GBrowse needs at > least v2.31. > > If you do not have time, please tell me and I 'll try to update it myself. Hi Olivier, thank you for the offer. I caught cold and have a bit of difficulty to focus, so I would be grateful if you would updated it. May I ask you to import version 2.30 in the Git repository before version 2.31, and to either send the build logs or commit them to the "meta" branch ? Bon week-end, -- Charles Plessy Illkirch-Graffenstaden, France -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20121215083758.ge12...@falafel.plessy.net
please upgrade libbio-graphics-perl
Hi Charles, could you please upgrade libbio-graphics-perl? New GBrowse needs at least v2.31. If you do not have time, please tell me and I 'll try to update it myself. Thanks Olivier -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/50cc31bf.1040...@codeless.fr
