Re: Is there a wiki I can keep notes for applications I install/package?
On Tue, Apr 26, 2011 at 01:52:02PM +0300, George Marselis wrote: > trf is a requirement for RepeatMasker > http://www.repeatmasker.org/RMDownload.html I thought i would put it > there as a place-holder and then email the gentlemen if they are > willing to release the source or give permission to distribute it in > the non-free section. was my logic flawed? No. The logic to contact the author of non-free software to change the license is perfectly fine. It was done several times successfully and you will find example e-mails as CC to this list in the archive (in March this year are several). Saying this I would like to recommend explicitely to CC the mailing list if you contact the author. I was just asking because your intend was not clear from the content of the task file. Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20110426120429.gh13...@an3as.eu
Re: Is there a wiki I can keep notes for applications I install/package?
> I fixed some mistakes - you might like to read my commit logs. just svn updated, will read them after work. >> SNAP, repeatmasker, trf, augustus, mugsy, apollo, chado, eHive, ECHO, >> ANNOVAR, CMap, GBrowse_syn, JBrowse, Trupal > > I wonder why you added trf if > > License: binary only (non-free) > > Seems to be non-distributable anyway - so why should it be added to the > list? > trf is a requirement for RepeatMasker http://www.repeatmasker.org/RMDownload.html I thought i would put it there as a place-holder and then email the gentlemen if they are willing to release the source or give permission to distribute it in the non-free section. was my logic flawed? > Kind regards > > Andreas. > > -- > http://fam-tille.de > all the best man, thank you for the comments! -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/banlktinmdxfrp2qpm8hzivcu3jqr5xe...@mail.gmail.com
Re: Is there a wiki I can keep notes for applications I install/package?
On Sat, Apr 23, 2011 at 11:22:03PM +0300, George Marselis wrote: > I just edited the bio and bio-ngs files, and posted them up. please > check to see if i made any mistakes. I fixed some mistakes - you might like to read my commit logs. > SNAP, repeatmasker, trf, augustus, mugsy, apollo, chado, eHive, ECHO, > ANNOVAR, CMap, GBrowse_syn, JBrowse, Trupal I wonder why you added trf if License: binary only (non-free) Seems to be non-distributable anyway - so why should it be added to the list? Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20110425205738.gb21...@an3as.eu
Re: Is there a wiki I can keep notes for applications I install/package?
hm I think I owe you guys an explanation: When I log in for the first time in any computer system, the very first thing I do, is drop my ssh key in to the authorized_keys file. So, I was surprised, when I tried to log into alioth and was greeted by the Password: prompt. and it just dawned on me that svn.debian.org == alioth.debian.org . So, I apologize for looking, again, like a complete dummy. I just edited the bio and bio-ngs files, and posted them up. please check to see if i made any mistakes. added: SNAP, repeatmasker, trf, augustus, mugsy, apollo, chado, eHive, ECHO, ANNOVAR, CMap, GBrowse_syn, JBrowse, Trupal Thank you very much. On Fri, Apr 22, 2011 at 1:18 AM, Andreas Tille wrote: > So this > > https://alioth.debian.org/users/project2501a-guest/ > > seems to be a different George Marselis which controls the e-mail > address geo...@marsel.is and is a member of Debian Med project since > 03.09.2010 15:49. If I were you I would talk to this person. :-) > > Hope this helps > > Andreas. > > On Thu, Apr 21, 2011 at 11:47:13PM +0300, George Marselis wrote: >> i tried what he suggested: debcheckout -a debian-med >> >> it connects me to svn.debian.org , but then i get asked for a username >> and password. which i definably do not have. >> >> On Thu, Apr 21, 2011 at 8:32 PM, Andreas Tille wrote: >> > On Thu, Apr 21, 2011 at 07:29:13PM +0300, George Marselis wrote: >> >> hey man, >> >> >> >> charles has not come back to me. did i say something stupid, or is he >> >> just supper busy? How do i get access to svn.debian.org, in order to >> >> modify the task list? >> > >> > Charles said any member of Debian Med has access - and you are a member. >> > Just try it. If not I will add you to the Blends team directly. >> > >> > If you can not commit, please foreward the according error message. >> > >> > Thanks for your interest >> > >> > Andreas. >> > >> > -- >> > http://fam-tille.de >> > >> > > -- > http://fam-tille.de > -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/banlktikoqhjy8ea62binjw28e9o2drn...@mail.gmail.com
Re: Is there a wiki I can keep notes for applications I install/package?
On Wed, Apr 20, 2011 at 03:58:42PM +0300, George Marselis wrote: > Missed that part! but hey, it means i might actually get out of work > today before 9pm! Uhmmm, no. You have promissed to update the tasks file for about 5 new programs. Just do this now after somebody else did your work. :-) ... and always watch http://debian-med.alioth.debian.org/tasks/bio closely whether your work is just done, right. :-) Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20110420130405.gc4...@an3as.eu
Re: Is there a wiki I can keep notes for applications I install/package?
Missed that part! but hey, it means i might actually get out of work today before 9pm! Go debian! great job guys! On Wed, Apr 20, 2011 at 3:48 PM, Andreas Tille wrote: > Hi George, > > regarding GMOD: I hope you just realised that one part "The GMOD > Generic Genome Browser" gbrowse is now packaged and available in > Debian unstable. > > Kind regards > > Andreas. > > On Tue, Apr 19, 2011 at 01:45:48PM +0300, George Marselis wrote: >> Hey guys, >> >> I am working on GMOD ( http://gmod.org/wiki/Main_Page ). As you can >> see for yourselves, that page was not created with a technical guy in >> mind. I need to make a summary of that page. I was wondering where I >> should put it. Is the Debian Wiki an acceptable solution? >> >> Thank you, >> >> George Marselis >> >> >> -- >> To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org >> with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org >> Archive: >> http://lists.debian.org/banlktinojmnswsacfzr9bvndkaof1rh...@mail.gmail.com >> >> > > -- > http://fam-tille.de > > > -- > To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org > with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org > Archive: http://lists.debian.org/20110420124838.gb4...@an3as.eu > > -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/banlktim9ntccrsqyrjmrpww36y7m6zw...@mail.gmail.com
Re: Is there a wiki I can keep notes for applications I install/package?
Hi George, regarding GMOD: I hope you just realised that one part "The GMOD Generic Genome Browser" gbrowse is now packaged and available in Debian unstable. Kind regards Andreas. On Tue, Apr 19, 2011 at 01:45:48PM +0300, George Marselis wrote: > Hey guys, > > I am working on GMOD ( http://gmod.org/wiki/Main_Page ). As you can > see for yourselves, that page was not created with a technical guy in > mind. I need to make a summary of that page. I was wondering where I > should put it. Is the Debian Wiki an acceptable solution? > > Thank you, > > George Marselis > > > -- > To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org > with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org > Archive: > http://lists.debian.org/banlktinojmnswsacfzr9bvndkaof1rh...@mail.gmail.com > > -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20110420124838.gb4...@an3as.eu
Re: Is there a wiki I can keep notes for applications I install/package?
On 04/19/2011 01:26 PM, Andreas Tille wrote: > On Tue, Apr 19, 2011 at 01:45:48PM +0300, George Marselis wrote: >> Hey guys, >> >> I am working on GMOD ( http://gmod.org/wiki/Main_Page ). As you can >> see for yourselves, that page was not created with a technical guy in >> mind. I need to make a summary of that page. I was wondering where I >> should put it. Is the Debian Wiki an acceptable solution? > If you want to do documentation of your Debian *packaging* effort > I'd suggest > > http://wiki.debian.org/DebianMed/GMOD > > (or something like this). However, I do not remember that we really > used the Wiki for such stuff. I do. Less for packaging than for a first success story with a package. See for instance euca2ools. Steffen -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/4dada00e@gmx.de
Re: Is there a wiki I can keep notes for applications I install/package?
On Tue, Apr 19, 2011 at 01:45:48PM +0300, George Marselis wrote: > Hey guys, > > I am working on GMOD ( http://gmod.org/wiki/Main_Page ). As you can > see for yourselves, that page was not created with a technical guy in > mind. I need to make a summary of that page. I was wondering where I > should put it. Is the Debian Wiki an acceptable solution? If you want to do documentation of your Debian *packaging* effort I'd suggest http://wiki.debian.org/DebianMed/GMOD (or something like this). However, I do not remember that we really used the Wiki for such stuff. Committing your code in SVN or Git was usually sufficient. If you want to add some generally visible remarks for non-packagers you can add a "Remark" field in the tasks file. Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20110419112626.ga10...@an3as.eu
Is there a wiki I can keep notes for applications I install/package?
Hey guys, I am working on GMOD ( http://gmod.org/wiki/Main_Page ). As you can see for yourselves, that page was not created with a technical guy in mind. I need to make a summary of that page. I was wondering where I should put it. Is the Debian Wiki an acceptable solution? Thank you, George Marselis -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/banlktinojmnswsacfzr9bvndkaof1rh...@mail.gmail.com
