Re: (Java-)Help with ne version of igv needed
Hi Olivier, On Sat, Sep 14, 2013 at 08:24:52AM +0200, olivier.sal...@codeless.fr wrote: > >> Are you sure you have a Java (openjdk) compiler installed? > > Hmmm, when building in pbuilder with git-buildpackage all preconditions > > should be fullfilled, shouldn't it? > right! so it is quite strange. In deed it is. > I could not build in pbuilder though due > to an issue with pbuilder itself on my computer. > As it did not change dependencies since previous builds, I though that > this would be fine. > > Since recently, pbuilder fails with an error on dpkg-source (Can't > locate strict.pm: permission denied), though I am running it on root and > updated pbuilder (package and chroot). > Do you have any idea of what could be wrong? I can not confirm this problem. May be asking on debian-mentors might help? Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20130915164445.gc20...@an3as.eu
Re: (Java-)Help with ne version of igv needed
On 09/13/2013 08:57 PM, Andreas Tille wrote: > Hi Olivier, > > On Fri, Sep 13, 2013 at 05:02:14PM +0200, Olivier Sallou wrote: >> hi, >> I just updated the git repo on my computer and tried a build, and it >> works fine, I could build the package. >> However, I had to download the upstream tar with get-orig-source, it is >> not set in pristine-tar branch (bu this is not theissue) > Hmmm, I guess I should just have `git push --tags` to make it visible. > Whatever, you have obviously solved it so that is fine. > >> Are you sure you have a Java (openjdk) compiler installed? > Hmmm, when building in pbuilder with git-buildpackage all preconditions > should be fullfilled, shouldn't it? right! so it is quite strange. I could not build in pbuilder though due to an issue with pbuilder itself on my computer. As it did not change dependencies since previous builds, I though that this would be fine. Since recently, pbuilder fails with an error on dpkg-source (Can't locate strict.pm: permission denied), though I am running it on root and updated pbuilder (package and chroot). Do you have any idea of what could be wrong? Olivier > > Kind regards > > Andreas. > > > -- > gpg key id: 4096R/326D8438 (keyring.debian.org) > Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/52340134.9050...@codeless.fr
Re: (Java-)Help with ne version of igv needed
Hi Olivier, On Fri, Sep 13, 2013 at 05:02:14PM +0200, Olivier Sallou wrote: > hi, > I just updated the git repo on my computer and tried a build, and it > works fine, I could build the package. > However, I had to download the upstream tar with get-orig-source, it is > not set in pristine-tar branch (bu this is not theissue) Hmmm, I guess I should just have `git push --tags` to make it visible. Whatever, you have obviously solved it so that is fine. > Are you sure you have a Java (openjdk) compiler installed? Hmmm, when building in pbuilder with git-buildpackage all preconditions should be fullfilled, shouldn't it? Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20130913185727.ga20...@an3as.eu
Re: (Java-)Help with ne version of igv needed
On 09/13/2013 03:12 PM, Andreas Tille wrote: > Hi, > > I used the chance to fix a minor bug in igv to also upload a new > upstream version. The build did not went as smooth as expected and > due to my Java dyslexia I feel incapable to solve this probably easy > problem: > > compile: > [javac] /tmp/buildd/igv-2.3.14+dfsg/build.xml:165: warning: > 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set > to false for repeatable builds > > BUILD FAILED > /tmp/buildd/igv-2.3.14+dfsg/build.xml:165: Unable to find a javac compiler; > com.sun.tools.javac.Main is not on the classpath. > Perhaps JAVA_HOME does not point to the JDK. > It is currently set to "/usr/lib/jvm/java-7-openjdk-amd64/jre" hi, I just updated the git repo on my computer and tried a build, and it works fine, I could build the package. However, I had to download the upstream tar with get-orig-source, it is not set in pristine-tar branch (bu this is not theissue) Are you sure you have a Java (openjdk) compiler installed? > > Total time: 1 second > dh_auto_build: ant returned exit code 1 > > > Everything (except my unsuccessful trials to set JAVA_HOME in various > ways) is pushed. > > Any hint? Team upload is perfectly fine if it simplifies things for > you. > > Have a nice weekend > > Andreas. > -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/523328f6.6060...@irisa.fr
Re: (Java-)Help with ne version of igv needed
On 09/13/2013 03:12 PM, Andreas Tille wrote: > Hi, > > I used the chance to fix a minor bug in igv to also upload a new > upstream version. The build did not went as smooth as expected and > due to my Java dyslexia I feel incapable to solve this probably easy > problem: > > compile: > [javac] /tmp/buildd/igv-2.3.14+dfsg/build.xml:165: warning: > 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set > to false for repeatable builds > > BUILD FAILED > /tmp/buildd/igv-2.3.14+dfsg/build.xml:165: Unable to find a javac compiler; > com.sun.tools.javac.Main is not on the classpath. Looking for Sun JDK. It looks like an other older issueI faced. I gonna have a look Olivier > Perhaps JAVA_HOME does not point to the JDK. > It is currently set to "/usr/lib/jvm/java-7-openjdk-amd64/jre" > > Total time: 1 second > dh_auto_build: ant returned exit code 1 > > > Everything (except my unsuccessful trials to set JAVA_HOME in various > ways) is pushed. > > Any hint? Team upload is perfectly fine if it simplifies things for > you. > > Have a nice weekend > > Andreas. > -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/5233263b.3090...@irisa.fr
