[med-svn] r13629 - trunk/packages/metastudent-data/trunk/debian

2013-05-18 Thread Laszlo Kajan
Author: lkajan
Date: 2013-05-18 07:18:09 + (Sat, 18 May 2013)
New Revision: 13629

Modified:
   trunk/packages/metastudent-data/trunk/debian/changelog
   trunk/packages/metastudent-data/trunk/debian/control
Log:
Added missing build dependency rsync (Closes: #708715)

Modified: trunk/packages/metastudent-data/trunk/debian/changelog
===
--- trunk/packages/metastudent-data/trunk/debian/changelog  2013-05-17 
21:39:30 UTC (rev 13628)
+++ trunk/packages/metastudent-data/trunk/debian/changelog  2013-05-18 
07:18:09 UTC (rev 13629)
@@ -1,7 +1,6 @@
-metastudent-data (1.0.1-1.1) UNRELEASED; urgency=low
+metastudent-data (1.0.1-2) unstable; urgency=low
 
-  * Non-maintainer upload.
-  * NOT RELEASED YET
+  * Added missing build dependency rsync (Closes: #708715)
 
  -- Laszlo Kajan lka...@rostlab.org  Wed, 08 May 2013 17:42:14 +0200
 

Modified: trunk/packages/metastudent-data/trunk/debian/control
===
--- trunk/packages/metastudent-data/trunk/debian/control2013-05-17 
21:39:30 UTC (rev 13628)
+++ trunk/packages/metastudent-data/trunk/debian/control2013-05-18 
07:18:09 UTC (rev 13629)
@@ -3,7 +3,7 @@
 Priority: optional
 Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
 Uploaders: Tobias Hamp ha...@rostlab.org, Laszlo Kajan lka...@debian.org
-Build-Depends-Indep: blast2, debhelper (=8~)
+Build-Depends-Indep: blast2, debhelper (=8~), rsync
 Standards-Version: 3.9.4
 Homepage: https://rostlab.org/owiki/index.php/Metastudent
 Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/metastudent-data/trunk/


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[med-svn] r13630 - trunk/packages/metastudent-data/trunk/debian

2013-05-18 Thread Laszlo Kajan
Author: lkajan
Date: 2013-05-18 08:09:12 + (Sat, 18 May 2013)
New Revision: 13630

Modified:
   trunk/packages/metastudent-data/trunk/debian/control
Log:
gave my rostlab email

Modified: trunk/packages/metastudent-data/trunk/debian/control
===
--- trunk/packages/metastudent-data/trunk/debian/control2013-05-18 
07:18:09 UTC (rev 13629)
+++ trunk/packages/metastudent-data/trunk/debian/control2013-05-18 
08:09:12 UTC (rev 13630)
@@ -2,7 +2,7 @@
 Section: science
 Priority: optional
 Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
-Uploaders: Tobias Hamp ha...@rostlab.org, Laszlo Kajan lka...@debian.org
+Uploaders: Tobias Hamp ha...@rostlab.org, Laszlo Kajan lka...@rostlab.org
 Build-Depends-Indep: blast2, debhelper (=8~), rsync
 Standards-Version: 3.9.4
 Homepage: https://rostlab.org/owiki/index.php/Metastudent


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[med-svn] r13631 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 08:50:27 + (Sat, 18 May 2013)
New Revision: 13631

Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
   trunk/packages/R/r-cran-evd/trunk/debian/compat
   trunk/packages/R/r-cran-evd/trunk/debian/control
Log:
New upstream version; usual updates


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:09:12 UTC 
(rev 13630)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:50:27 UTC 
(rev 13631)
@@ -1,3 +1,14 @@
+r-cran-evd (2.3-0-1) UNRELEASED; urgency=low
+
+  * New upstream version
+  * debian/control:
+ - Standards-Version: 3.9.4 (no changes needed)
+ - DM-Upload-Allowed removed
+ - debhelper 9 (also debian/compat)
+ - normalised format
+
+ -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
+
 r-cran-evd (2.2-4-2) unstable; urgency=low
 
   * debian/{control,rules}: Depends: ${R:Depends}

Modified: trunk/packages/R/r-cran-evd/trunk/debian/compat
===
--- trunk/packages/R/r-cran-evd/trunk/debian/compat 2013-05-18 08:09:12 UTC 
(rev 13630)
+++ trunk/packages/R/r-cran-evd/trunk/debian/compat 2013-05-18 08:50:27 UTC 
(rev 13631)
@@ -1 +1 @@
-8
+9

Modified: trunk/packages/R/r-cran-evd/trunk/debian/control
===
--- trunk/packages/R/r-cran-evd/trunk/debian/control2013-05-18 08:09:12 UTC 
(rev 13630)
+++ trunk/packages/R/r-cran-evd/trunk/debian/control2013-05-18 08:50:27 UTC 
(rev 13631)
@@ -1,18 +1,22 @@
 Source: r-cran-evd
+Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
+Uploaders: Steffen Moeller moel...@debian.org,
+   Andreas Tille ti...@debian.org
 Section: gnu-r
 Priority: optional
-Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
-Uploaders: Steffen Moeller moel...@debian.org,
- Andreas Tille ti...@debian.org
-Build-Depends: debhelper (= 8), r-base-dev (= 2.10.0~1), cdbs
-Standards-Version: 3.9.2
-Homepage: http://cran.r-project.org/web/packages/evd
+Build-Depends: debhelper (= 9),
+   r-base-dev (= 2.10.0~1),
+   cdbs
+Standards-Version: 3.9.4
 Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-evd/trunk/
 Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-evd/trunk/
+Homepage: http://cran.r-project.org/web/packages/evd
 
 Package: r-cran-evd
 Architecture: any
-Depends: ${R:Depends}, ${misc:Depends}, ${shlibs:Depends}
+Depends: ${R:Depends},
+ ${misc:Depends},
+ ${shlibs:Depends}
 Description: GNU R Functions for extreme value distributions
  Extends simulation, distribution, quantile and density functions to
  univariate and multivariate parametric extreme value distributions, and


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[med-svn] r13632 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 08:51:09 + (Sat, 18 May 2013)
New Revision: 13632

Added:
   trunk/packages/R/r-cran-evd/trunk/debian/README.test
Removed:
   trunk/packages/R/r-cran-evd/trunk/debian/README.Debian
Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
Log:
mv README.Debian README.test


Deleted: trunk/packages/R/r-cran-evd/trunk/debian/README.Debian
===
--- trunk/packages/R/r-cran-evd/trunk/debian/README.Debian  2013-05-18 
08:50:27 UTC (rev 13631)
+++ trunk/packages/R/r-cran-evd/trunk/debian/README.Debian  2013-05-18 
08:51:09 UTC (rev 13632)
@@ -1,7 +0,0 @@
-Notes on how this package can be tested.
-
-
-This package can be tested by loading it into R with the command
-‘library(evd)’ in order to confirm its integrity.
-
- -- Andreas Tille ti...@debian.org  Tue, 18 Oct 2011 19:46:07 +0200

Copied: trunk/packages/R/r-cran-evd/trunk/debian/README.test (from rev 13552, 
trunk/packages/R/r-cran-evd/trunk/debian/README.Debian)
===
--- trunk/packages/R/r-cran-evd/trunk/debian/README.test
(rev 0)
+++ trunk/packages/R/r-cran-evd/trunk/debian/README.test2013-05-18 
08:51:09 UTC (rev 13632)
@@ -0,0 +1,7 @@
+Notes on how this package can be tested.
+
+
+This package can be tested by loading it into R with the command
+‘library(evd)’ in order to confirm its integrity.
+
+ -- Andreas Tille ti...@debian.org  Tue, 18 Oct 2011 19:46:07 +0200

Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:50:27 UTC 
(rev 13631)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:51:09 UTC 
(rev 13632)
@@ -6,6 +6,7 @@
  - DM-Upload-Allowed removed
  - debhelper 9 (also debian/compat)
  - normalised format
+  * mv README.Debian README.test
 
  -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
 


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[med-svn] r13633 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 08:57:07 + (Sat, 18 May 2013)
New Revision: 13633

Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
   trunk/packages/R/r-cran-evd/trunk/debian/copyright
Log:
DEP5


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:51:09 UTC 
(rev 13632)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:57:07 UTC 
(rev 13633)
@@ -7,6 +7,7 @@
  - debhelper 9 (also debian/compat)
  - normalised format
   * mv README.Debian README.test
+  * debian/copyright: DEP5
 
  -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
 

Modified: trunk/packages/R/r-cran-evd/trunk/debian/copyright
===
--- trunk/packages/R/r-cran-evd/trunk/debian/copyright  2013-05-18 08:51:09 UTC 
(rev 13632)
+++ trunk/packages/R/r-cran-evd/trunk/debian/copyright  2013-05-18 08:57:07 UTC 
(rev 13633)
@@ -1,22 +1,31 @@
-This is the Debian package of the GNU R package known as evd.  The
-upstream author is Alec Stephenson alec_stephen...@hotmail.com
-with a contribution by Chris Ferro.
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: evd
+Upstream-Contact: Alec Stephenson alec_stephen...@hotmail.com
+Source: http://cran.r-project.org/web/packages/evd/
 
-This package was created by Steffen Moeller moel...@debian.org,
-indirectly based on Dirk Eddelbuettel's packaging of r-cran-car.
+Files: *
+Copyright: 2002-2012 Alec Stephenson alec_stephen...@hotmail.com, Chris Ferro
+License: GPL-3+
 
-The sources were downloaded from 
-   http://cran.us.r-project.org/src/contrib/
+Files: debian/*
+Copyright: 2010 Steffen Moeller moel...@debian.org
+   2011-2013 Andreas Tille ti...@debian.org
+License: GPL-3+
 
-The package was renamed from its upstream name 'evd' to 'r-cran-evd'
-to fit the pattern of CRAN (and non-CRAN) packages for R.
+License: GPL-3+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program.  If not, see http://www.gnu.org/licenses/.
+ .
+ On Debian systems, the complete text of the GNU Public
+ License can be found in `/usr/share/common-licenses/GPL'.
 
-This package is maintained and its copyright owned by (C) 2008 Alec
-Stephenson.  It has been placed under the GNU General Public License
-version 2 or later.
-
-On Debian systems, the GPL version 2 is included in the file
-/usr/share/common-licenses/GPL-2.
-
-The upstream DESCRIPTION file for this package is available in
-/usr/lib/R/site-library/evd/ .


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[med-svn] r13634 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 09:01:00 + (Sat, 18 May 2013)
New Revision: 13634

Added:
   trunk/packages/R/r-cran-evd/trunk/debian/upstream
Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
Log:
Add citation information


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 08:57:07 UTC 
(rev 13633)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:01:00 UTC 
(rev 13634)
@@ -8,6 +8,7 @@
  - normalised format
   * mv README.Debian README.test
   * debian/copyright: DEP5
+  * debian/upstream: Add citation information
 
  -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
 

Added: trunk/packages/R/r-cran-evd/trunk/debian/upstream
===
--- trunk/packages/R/r-cran-evd/trunk/debian/upstream   
(rev 0)
+++ trunk/packages/R/r-cran-evd/trunk/debian/upstream   2013-05-18 09:01:00 UTC 
(rev 13634)
@@ -0,0 +1,9 @@
+Reference:
+  Author: Alec G. Stephenson
+  Title: evd: Extreme Value Distributions
+  Journal: R News
+  Year: 2002
+  Volume: 2
+  Number: 2
+  Pages: 31-32
+  URL: http://CRAN.R-project.org/doc/Rnews/


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[med-svn] r13635 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 09:02:20 + (Sat, 18 May 2013)
New Revision: 13635

Added:
   trunk/packages/R/r-cran-evd/trunk/debian/docs
Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
Log:
Make sure README.tests will be really installed


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:01:00 UTC 
(rev 13634)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:02:20 UTC 
(rev 13635)
@@ -6,7 +6,7 @@
  - DM-Upload-Allowed removed
  - debhelper 9 (also debian/compat)
  - normalised format
-  * mv README.Debian README.test
+  * mv README.Debian README.test; install via debian/docs
   * debian/copyright: DEP5
   * debian/upstream: Add citation information
 

Added: trunk/packages/R/r-cran-evd/trunk/debian/docs
===
--- trunk/packages/R/r-cran-evd/trunk/debian/docs   
(rev 0)
+++ trunk/packages/R/r-cran-evd/trunk/debian/docs   2013-05-18 09:02:20 UTC 
(rev 13635)
@@ -0,0 +1 @@
+debian/README.test


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[med-svn] r13636 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 09:04:14 + (Sat, 18 May 2013)
New Revision: 13636

Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
   trunk/packages/R/r-cran-evd/trunk/debian/control
   trunk/packages/R/r-cran-evd/trunk/debian/rules
Log:
Remove unneeded code to obtain R:Depends variable as well as remove versioned 
Dependency


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:02:20 UTC 
(rev 13635)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:04:14 UTC 
(rev 13636)
@@ -6,9 +6,11 @@
  - DM-Upload-Allowed removed
  - debhelper 9 (also debian/compat)
  - normalised format
+ - remove versioned Build-Depends from r-base-dev
   * mv README.Debian README.test; install via debian/docs
   * debian/copyright: DEP5
   * debian/upstream: Add citation information
+  * debian/rules: Remove unneeded code to obtain R:Depends variable
 
  -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
 

Modified: trunk/packages/R/r-cran-evd/trunk/debian/control
===
--- trunk/packages/R/r-cran-evd/trunk/debian/control2013-05-18 09:02:20 UTC 
(rev 13635)
+++ trunk/packages/R/r-cran-evd/trunk/debian/control2013-05-18 09:04:14 UTC 
(rev 13636)
@@ -5,7 +5,7 @@
 Section: gnu-r
 Priority: optional
 Build-Depends: debhelper (= 9),
-   r-base-dev (= 2.10.0~1),
+   r-base-dev,
cdbs
 Standards-Version: 3.9.4
 Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-evd/trunk/

Modified: trunk/packages/R/r-cran-evd/trunk/debian/rules
===
--- trunk/packages/R/r-cran-evd/trunk/debian/rules  2013-05-18 09:02:20 UTC 
(rev 13635)
+++ trunk/packages/R/r-cran-evd/trunk/debian/rules  2013-05-18 09:04:14 UTC 
(rev 13636)
@@ -4,7 +4,3 @@
 # Copyright 2011 by Andreas Tille ti...@debian.org, GPL
 
 include /usr/share/R/debian/r-cran.mk
-
-install/$(package)::
-   # Require a number equal or superior than the R version the package was 
built with.
-   echo R:Depends=r-base-core (= $(shell R --version | head -n1 | perl 
-ne 'print / +([0-9]\.[0-9]+\.[0-9])/')~)  debian/$(package).substvars


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[med-svn] r13637 - trunk/packages/R/r-cran-evd/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 09:19:05 + (Sat, 18 May 2013)
New Revision: 13637

Modified:
   trunk/packages/R/r-cran-evd/trunk/debian/changelog
   trunk/packages/R/r-cran-evd/trunk/debian/rules
Log:
Remove executable flag from docs and upload to unstable


Modified: trunk/packages/R/r-cran-evd/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:04:14 UTC 
(rev 13636)
+++ trunk/packages/R/r-cran-evd/trunk/debian/changelog  2013-05-18 09:19:05 UTC 
(rev 13637)
@@ -1,4 +1,4 @@
-r-cran-evd (2.3-0-1) UNRELEASED; urgency=low
+r-cran-evd (2.3-0-1) unstable; urgency=low
 
   * New upstream version
   * debian/control:
@@ -10,7 +10,9 @@
   * mv README.Debian README.test; install via debian/docs
   * debian/copyright: DEP5
   * debian/upstream: Add citation information
-  * debian/rules: Remove unneeded code to obtain R:Depends variable
+  * debian/rules:
+ - Remove unneeded code to obtain R:Depends variable
+ - Remove executable flag from docs
 
  -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 10:51:08 +0200
 

Modified: trunk/packages/R/r-cran-evd/trunk/debian/rules
===
--- trunk/packages/R/r-cran-evd/trunk/debian/rules  2013-05-18 09:04:14 UTC 
(rev 13636)
+++ trunk/packages/R/r-cran-evd/trunk/debian/rules  2013-05-18 09:19:05 UTC 
(rev 13637)
@@ -4,3 +4,9 @@
 # Copyright 2011 by Andreas Tille ti...@debian.org, GPL
 
 include /usr/share/R/debian/r-cran.mk
+
+install/$(package)::
+   chmod 644 debian/$(package)/usr/lib/R/site-library/$(cranName)/doc/*
+   chmod 644 debian/$(package)/usr/lib/R/site-library/$(cranName)/README
+   chmod 644 debian/$(package)/usr/lib/R/site-library/$(cranName)/CITATION
+   chmod 644 debian/$(package)/usr/lib/R/site-library/$(cranName)/CHANGES


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[med-svn] r13638 - trunk/packages/R/r-cran-evd/tags

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 09:20:14 + (Sat, 18 May 2013)
New Revision: 13638

Added:
   trunk/packages/R/r-cran-evd/tags/2.3-0-1/
Log:
Tagged 2.3-0-1



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[med-svn] r13639 - trunk/packages/mgltools/mgltools-external-get-orig-source

2013-05-18 Thread Thorsten Alteholz
Author: alteholz
Date: 2013-05-18 09:48:37 + (Sat, 18 May 2013)
New Revision: 13639

Added:
   trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version.ok
Modified:
   trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version
Log:
new release

Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version
===
--- trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version
2013-05-18 09:20:14 UTC (rev 13638)
+++ trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version
2013-05-18 09:48:37 UTC (rev 13639)
@@ -1 +0,0 @@
-~rc3

Added: trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version.ok
===
--- trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version.ok 
(rev 0)
+++ trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version.ok 
2013-05-18 09:48:37 UTC (rev 13639)
@@ -0,0 +1 @@
+~rc3


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[med-svn] r13640 - trunk/packages/R/r-cran-labeling/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 11:20:53 + (Sat, 18 May 2013)
New Revision: 13640

Modified:
   trunk/packages/R/r-cran-labeling/trunk/debian/changelog
   trunk/packages/R/r-cran-labeling/trunk/debian/control
Log:
Naming the source package r-cran-labeling rather than labeling would have been 
actually a good idea *before* the upload - but finally the package is out and 
the status of SVN should not be differnet from the released package.  Currently 
I do not see to go down the road of uploading to new and asking for removal of 
the old package just to do the name cosmetics.


Modified: trunk/packages/R/r-cran-labeling/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-labeling/trunk/debian/changelog 2013-05-18 
09:48:37 UTC (rev 13639)
+++ trunk/packages/R/r-cran-labeling/trunk/debian/changelog 2013-05-18 
11:20:53 UTC (rev 13640)
@@ -1,4 +1,4 @@
-r-cran-labeling (0.1-1) unstable; urgency=low
+labeling (0.1-1) unstable; urgency=low
 
   * Initial release (Closes: #700858)
 

Modified: trunk/packages/R/r-cran-labeling/trunk/debian/control
===
--- trunk/packages/R/r-cran-labeling/trunk/debian/control   2013-05-18 
09:48:37 UTC (rev 13639)
+++ trunk/packages/R/r-cran-labeling/trunk/debian/control   2013-05-18 
11:20:53 UTC (rev 13640)
@@ -1,10 +1,10 @@
-Source: r-cran-labeling
+Source: labeling
 Section: gnu-r
 Priority: optional
 Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
 Uploaders: Ivo Maintz i...@maintz.de
 Build-Depends: debhelper (= 9.0.0),
- r-base-dev (= 3.0.0),
+ r-base-dev (= 2.14.2~20120222),
  cdbs
 Standards-Version: 3.9.4
 Homepage: http://cran.r-project.org/web/packages/labeling/


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[med-svn] r13641 - trunk/packages/mgltools/mgltools-external-get-orig-source

2013-05-18 Thread Thorsten Alteholz
Author: alteholz
Date: 2013-05-18 11:52:25 + (Sat, 18 May 2013)
New Revision: 13641

Modified:
   trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source
Log:
we sometimes have a real release

Modified: 
trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source
===
--- trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source   
2013-05-18 11:20:53 UTC (rev 13640)
+++ trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source   
2013-05-18 11:52:25 UTC (rev 13641)
@@ -55,8 +55,14 @@
 if [ -f $MGLTOOLSCVS/build-for-date ]; then
   DATE=`cat $MGLTOOLSCVS/build-for-date`
 fi
-origFilename=${DEBPACKAGE}_${version}${rcversion}~cvs.${DATE}.orig.tar.gz
-origDirname=${DEBPACKAGE}-${version}${rcversion}~cvs.${DATE}
+if [ -z ${rcversion} ]; then
+  echo I: no rc but real release
+  origFilename=${DEBPACKAGE}_${version}${rcversion}.orig.tar.gz
+  origDirname=${DEBPACKAGE}-${version}${rcversion}
+else
+  origFilename=${DEBPACKAGE}_${version}${rcversion}~cvs.${DATE}.orig.tar.gz
+  origDirname=${DEBPACKAGE}-${version}${rcversion}~cvs.${DATE}
+fi
 
 echo I: Filename of origFile: $origFilename
 


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[med-svn] r13642 - trunk/packages/R/r-cran-labeling/trunk/debian

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 12:10:52 + (Sat, 18 May 2013)
New Revision: 13642

Modified:
   trunk/packages/R/r-cran-labeling/trunk/debian/changelog
   trunk/packages/R/r-cran-labeling/trunk/debian/control
Log:
Rebuild against r-base-dev 3.0 plus some cosmetic changes


Modified: trunk/packages/R/r-cran-labeling/trunk/debian/changelog
===
--- trunk/packages/R/r-cran-labeling/trunk/debian/changelog 2013-05-18 
11:52:25 UTC (rev 13641)
+++ trunk/packages/R/r-cran-labeling/trunk/debian/changelog 2013-05-18 
12:10:52 UTC (rev 13642)
@@ -1,3 +1,13 @@
+labeling (0.1-2) unstable; urgency=low
+
+  * Rebuild against r-base-dev 3.0
+  * debian/control:
+ - Added myself to Uploaders
+ - normalised format
+ - remove version from Build-Depends r-base-dev
+
+ -- Andreas Tille ti...@debian.org  Sat, 18 May 2013 13:53:54 +0200
+
 labeling (0.1-1) unstable; urgency=low
 
   * Initial release (Closes: #700858)

Modified: trunk/packages/R/r-cran-labeling/trunk/debian/control
===
--- trunk/packages/R/r-cran-labeling/trunk/debian/control   2013-05-18 
11:52:25 UTC (rev 13641)
+++ trunk/packages/R/r-cran-labeling/trunk/debian/control   2013-05-18 
12:10:52 UTC (rev 13642)
@@ -2,18 +2,20 @@
 Section: gnu-r
 Priority: optional
 Maintainer: Debian Med Packaging Team 
debian-med-packag...@lists.alioth.debian.org
-Uploaders: Ivo Maintz i...@maintz.de
-Build-Depends: debhelper (= 9.0.0),
- r-base-dev (= 2.14.2~20120222),
- cdbs
+Uploaders: Ivo Maintz i...@maintz.de,
+   Andreas Tille ti...@debian.org
+Build-Depends: debhelper (= 9.0),
+   r-base-dev,
+   cdbs
 Standards-Version: 3.9.4
-Homepage: http://cran.r-project.org/web/packages/labeling/
 Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-labeling/trunk/
 Vcs-Svn: 
svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-labeling/trunk/
+Homepage: http://cran.r-project.org/web/packages/labeling/
 
 Package: r-cran-labeling
 Architecture: all
-Depends: ${R:Depends}, ${misc:Depends}
+Depends: ${R:Depends},
+ ${misc:Depends}
 Description: GNU R Axis Labeling optimization
  This system extends Wilkinsons optimization-based labeling approach to create
  a more robust, full-featured axis labeler.


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[med-svn] r13643 - in trunk/packages/R/r-cran-labeling: . tags

2013-05-18 Thread Andreas Tille
Author: tille
Date: 2013-05-18 12:11:35 + (Sat, 18 May 2013)
New Revision: 13643

Added:
   trunk/packages/R/r-cran-labeling/tags/
   trunk/packages/R/r-cran-labeling/tags/0.1-1/
   trunk/packages/R/r-cran-labeling/tags/0.1-2/
Log:
Commit tags



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[med-svn] [SCM] r-bioc-cummerbund tag, debian/1.2.0-2, created. upstream/1.2.0-35-gc320cf7

2013-05-18 Thread Andreas Tille
The tag, debian/1.2.0-2 has been created
at  c320cf703c4719da31812d85d3223b82a6f6990b (commit)

- Shortlog 
commit c320cf703c4719da31812d85d3223b82a6f6990b
Author: Andreas Tille ti...@debian.org
Date:   Sat May 18 14:32:02 2013 +0200

Upload to unstable after verifying that predepends are properly built
---

-- 
Packaging for R/Bioconductor/cummeRbund in Debian

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[med-svn] r13644 - in trunk/packages/mgltools: autodocktools/trunk/debian bhtree/trunk/debian cadd/trunk/debian cmolkit/trunk/debian dejavu/trunk/debian geomutils/trunk/debian gle/trunk/debian mglutil

2013-05-18 Thread Thorsten Alteholz
Author: alteholz
Date: 2013-05-18 14:48:35 + (Sat, 18 May 2013)
New Revision: 13644

Added:
   
trunk/packages/mgltools/visionlibraries/trunk/debian/mgltools-visionlibraries.lintian-overrides
Modified:
   trunk/packages/mgltools/autodocktools/trunk/debian/changelog
   trunk/packages/mgltools/bhtree/trunk/debian/changelog
   trunk/packages/mgltools/bhtree/trunk/debian/control
   trunk/packages/mgltools/cadd/trunk/debian/changelog
   trunk/packages/mgltools/cadd/trunk/debian/control
   trunk/packages/mgltools/cmolkit/trunk/debian/changelog
   trunk/packages/mgltools/cmolkit/trunk/debian/control
   trunk/packages/mgltools/cmolkit/trunk/debian/copyright
   trunk/packages/mgltools/cmolkit/trunk/debian/rules
   trunk/packages/mgltools/dejavu/trunk/debian/changelog
   trunk/packages/mgltools/dejavu/trunk/debian/control
   trunk/packages/mgltools/geomutils/trunk/debian/changelog
   trunk/packages/mgltools/gle/trunk/debian/changelog
   trunk/packages/mgltools/mglutil/trunk/debian/changelog
   trunk/packages/mgltools/mglutil/trunk/debian/control
   trunk/packages/mgltools/molkit/trunk/debian/changelog
   trunk/packages/mgltools/molkit/trunk/debian/control
   trunk/packages/mgltools/molkit/trunk/debian/copyright
   trunk/packages/mgltools/mslib/trunk/debian/changelog
   trunk/packages/mgltools/networkeditor/trunk/debian/changelog
   trunk/packages/mgltools/networkeditor/trunk/debian/control
   trunk/packages/mgltools/opengltk/trunk/debian/changelog
   trunk/packages/mgltools/packging_helpers/svn_buildpackage_all
   trunk/packages/mgltools/pmv/trunk/debian/changelog
   trunk/packages/mgltools/pyautodock/trunk/debian/changelog
   trunk/packages/mgltools/pyautodock/trunk/debian/control
   trunk/packages/mgltools/pybabel/trunk/debian/changelog
   trunk/packages/mgltools/pybabel/trunk/debian/control
   trunk/packages/mgltools/pyglf/trunk/debian/changelog
   trunk/packages/mgltools/qslimlib/trunk/debian/changelog
   trunk/packages/mgltools/qslimlib/trunk/debian/control
   trunk/packages/mgltools/qslimlib/trunk/debian/copyright
   trunk/packages/mgltools/qslimlib/trunk/debian/rules
   trunk/packages/mgltools/scenario2/trunk/debian/changelog
   trunk/packages/mgltools/scenario2/trunk/debian/control
   trunk/packages/mgltools/sff/trunk/debian/changelog
   trunk/packages/mgltools/support/trunk/debian/changelog
   trunk/packages/mgltools/symserv/trunk/debian/changelog
   trunk/packages/mgltools/symserv/trunk/debian/control
   trunk/packages/mgltools/utpackages/trunk/debian/changelog
   trunk/packages/mgltools/viewerframework/trunk/debian/changelog
   trunk/packages/mgltools/viewerframework/trunk/debian/control
   trunk/packages/mgltools/vision/trunk/debian/changelog
   trunk/packages/mgltools/visionlibraries/trunk/debian/changelog
   trunk/packages/mgltools/volume/trunk/debian/changelog
   trunk/packages/mgltools/volume/trunk/debian/control
   trunk/packages/mgltools/webservices/trunk/debian/changelog
   trunk/packages/mgltools/webservices/trunk/debian/control
Log:
first part of mgltools update

Modified: trunk/packages/mgltools/autodocktools/trunk/debian/changelog
===
--- trunk/packages/mgltools/autodocktools/trunk/debian/changelog
2013-05-18 12:11:35 UTC (rev 13643)
+++ trunk/packages/mgltools/autodocktools/trunk/debian/changelog
2013-05-18 14:48:35 UTC (rev 13644)
@@ -1,3 +1,10 @@
+autodocktools (1.5.6-1) unstable; urgency=low
+
+  * New upstream version.
+  * debian/control: bump standard to 3.9.4 (no changes)
+
+ -- Thorsten Alteholz deb...@alteholz.de  Sat, 16 May 2013 12:00:00 +0200
+
 autodocktools (1.5.6~rc3~cvs.20120206-2) UNRELEASED; urgency=low
 
   * debian/upstream: Enhanced citation information

Modified: trunk/packages/mgltools/bhtree/trunk/debian/changelog
===
--- trunk/packages/mgltools/bhtree/trunk/debian/changelog   2013-05-18 
12:11:35 UTC (rev 13643)
+++ trunk/packages/mgltools/bhtree/trunk/debian/changelog   2013-05-18 
14:48:35 UTC (rev 13644)
@@ -1,3 +1,9 @@
+mgltools-bhtree (1.5.6-1) unstable; urgency=low
+
+  * New upstream version.
+
+ -- Thorsten Alteholz deb...@alteholz.de  Sat, 16 May 2013 12:00:00 +0200
+
 mgltools-bhtree (1.5.6~rc3~cvs.20120601-1) unstable; urgency=low
 
   * New upstream version.

Modified: trunk/packages/mgltools/bhtree/trunk/debian/control
===
--- trunk/packages/mgltools/bhtree/trunk/debian/control 2013-05-18 12:11:35 UTC 
(rev 13643)
+++ trunk/packages/mgltools/bhtree/trunk/debian/control 2013-05-18 14:48:35 UTC 
(rev 13644)
@@ -9,7 +9,7 @@
  Andreas Tille ti...@debian.org,
  Thorsten Alteholz deb...@alteholz.de
 Build-Depends: debhelper (= 8), python-all-dev (= 2.6), python-numpy, swig 
(= 1.3.20)
-Standards-Version: 3.9.3
+Standards-Version: 3.9.4
 XS-Python-Version: = 2.5
 Vcs-Browser: