[med-svn] r13717 - trunk/packages/melting/trunk/debian
Author: alteholz Date: 2013-05-27 19:58:56 + (Mon, 27 May 2013) New Revision: 13717 Modified: trunk/packages/melting/trunk/debian/changelog trunk/packages/melting/trunk/debian/control trunk/packages/melting/trunk/debian/rules trunk/packages/melting/trunk/debian/watch Log: first step to new upstream version Modified: trunk/packages/melting/trunk/debian/changelog === --- trunk/packages/melting/trunk/debian/changelog 2013-05-27 17:41:01 UTC (rev 13716) +++ trunk/packages/melting/trunk/debian/changelog 2013-05-27 19:58:56 UTC (rev 13717) @@ -1,3 +1,11 @@ +melting (5.1.0-1) UNRELEASED; urgency=low + + * new upstream version + * debian/watch: new syntax + * debian/control: bump standard to 3.9.4 (no changes) + + -- Thorsten Alteholz Sun, 26 May 2013 18:00:00 +0200 + melting (4.3c-2) unstable; urgency=low [ Charles Plessy ] Modified: trunk/packages/melting/trunk/debian/control === --- trunk/packages/melting/trunk/debian/control 2013-05-27 17:41:01 UTC (rev 13716) +++ trunk/packages/melting/trunk/debian/control 2013-05-27 19:58:56 UTC (rev 13717) @@ -4,9 +4,10 @@ Maintainer: Debian Med Packaging Team DM-Upload-Allowed: yes Uploaders: Charles Plessy , - Andreas Tille + Andreas Tille , + Thorsten Alteholz Build-Depends: debhelper (>= 9) -Standards-Version: 3.9.3 +Standards-Version: 3.9.4 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/melting/trunk/ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/melting/trunk/ Homepage: http://www.ebi.ac.uk/compneur-srv/melting/ Modified: trunk/packages/melting/trunk/debian/rules === --- trunk/packages/melting/trunk/debian/rules 2013-05-27 17:41:01 UTC (rev 13716) +++ trunk/packages/melting/trunk/debian/rules 2013-05-27 19:58:56 UTC (rev 13717) @@ -19,3 +19,8 @@ install -D BIN/tkmelting.pl $(CURDIR)/debian/melting-gui/usr/bin/tkmelting install -m 644 -D BIN/melting.hlp $(CURDIR)/debian/melting-gui/usr/share/melting/melting.hlp install -m 644 -D melting-gui.desktop $(CURDIR)/debian/melting-gui/usr/share/applications/melting-gui.desktop + +get-orig-source: + mkdir -p ../tarballs + uscan --verbose --force-download --destdir=../tarballs + Modified: trunk/packages/melting/trunk/debian/watch === --- trunk/packages/melting/trunk/debian/watch 2013-05-27 17:41:01 UTC (rev 13716) +++ trunk/packages/melting/trunk/debian/watch 2013-05-27 19:58:56 UTC (rev 13717) @@ -1,2 +1,3 @@ version=3 -http://sf.net/melting/melting(.*?)_(.*?)\.tar\.gz +opts="uversionmangle=s/_/\./" \ + http://sf.net/melting/MELTING([\d._]*)\.tar\.gz ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] r13716 - trunk/packages/plastimatch/trunk/debian
Author: gregsharp-guest Date: 2013-05-27 17:41:01 + (Mon, 27 May 2013) New Revision: 13716 Modified: trunk/packages/plastimatch/trunk/debian/get-orig-source Log: Fix plastimatch get-orig-source to account for change in behavior of uscan Modified: trunk/packages/plastimatch/trunk/debian/get-orig-source === --- trunk/packages/plastimatch/trunk/debian/get-orig-source 2013-05-27 17:28:23 UTC (rev 13715) +++ trunk/packages/plastimatch/trunk/debian/get-orig-source 2013-05-27 17:41:01 UTC (rev 13716) @@ -3,7 +3,7 @@ # This lets us use a different (local) tarball during debugging. # Just put file name on the command line. if test -z "$1"; then -download_name=`uscan --verbose --force-download | grep Source | head -n 2 | tail -n 1 | sed -e 's/.*\///'`; +download_name=`uscan --verbose --force-download | grep Source | head -n 2 | tail -n 1 | sed -e 's/.*\///' | sed -e 's/\ .*$//'`; echo Downloaded $download_name else download_name=$1 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] r13715 - trunk/packages/plastimatch/trunk/debian
Author: gregsharp-guest Date: 2013-05-27 17:28:23 + (Mon, 27 May 2013) New Revision: 13715 Modified: trunk/packages/plastimatch/trunk/debian/changelog trunk/packages/plastimatch/trunk/debian/control trunk/packages/plastimatch/trunk/debian/copyright trunk/packages/plastimatch/trunk/debian/get-orig-source trunk/packages/plastimatch/trunk/debian/rules Log: Update plastimatch for new upstream version Modified: trunk/packages/plastimatch/trunk/debian/changelog === --- trunk/packages/plastimatch/trunk/debian/changelog 2013-05-27 12:46:07 UTC (rev 13714) +++ trunk/packages/plastimatch/trunk/debian/changelog 2013-05-27 17:28:23 UTC (rev 13715) @@ -1,10 +1,21 @@ -plastimatch (1.5.11+dfsg1-1) UNRELEASED; urgency=low +plastimatch (1.5.13+dfsg0-1) unstable; urgency=low + [ Andreas Tille ] * debian/copyright: Add Files-Excluded to document what was removed from original source - -- Andreas Tille Wed, 29 Aug 2012 11:08:32 +0200 + [ Gregory C. Sharp ] + * new upstream release + * debian/control: change to unversion libtiff-dev (Closes: #682809) + * debian/control: gfortran is no longer required as dependency, +bump libinsighttoolkit3-dev version number + * debian/copyright: add license information for nkidecompress, +specfun library + * debian/get-orig-source: update to match new upstream + * debian/rules: update to match new upstream + -- Gregory C. Sharp Thu, 24 Jan 2013 00:22:38 -0500 + plastimatch (1.5.11+dfsg0-1) unstable; urgency=low * new upstream release (Closes: #674373) Modified: trunk/packages/plastimatch/trunk/debian/control === --- trunk/packages/plastimatch/trunk/debian/control 2013-05-27 12:46:07 UTC (rev 13714) +++ trunk/packages/plastimatch/trunk/debian/control 2013-05-27 17:28:23 UTC (rev 13715) @@ -5,13 +5,12 @@ DM-Upload-Allowed: yes Uploaders: Gregory C. Sharp , Dominique Belhachemi Build-Depends: debhelper (>= 9), cmake, - gfortran, libdcmtk2-dev (>= 3.6.0-10), libfftw3-dev, libgdcm2-dev, - libinsighttoolkit3-dev (>= 3.20.0-15), + libinsighttoolkit3-dev (>= 3.20.1), libpng-dev, - libtiff4-dev, + libtiff-dev, uuid-dev, zlib1g-dev Standards-Version: 3.9.3 Modified: trunk/packages/plastimatch/trunk/debian/copyright === --- trunk/packages/plastimatch/trunk/debian/copyright 2013-05-27 12:46:07 UTC (rev 13714) +++ trunk/packages/plastimatch/trunk/debian/copyright 2013-05-27 17:28:23 UTC (rev 13715) @@ -23,13 +23,10 @@ src/reg-2-3 src/slicer src/plastimatch/test/opencl_test.* -libs/dlib-17.34 libs/getopt libs/libf2c libs/msinttypes -libs/specfun libs/sqlite-3.6.21 -libs/win32 Files: * Copyright: (c) 2004-2011 Massachusetts General Hospital @@ -373,3 +370,34 @@ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +Files: libs/specfun +Copyright: 1994-2008 Shanjie Zhang, Jianming Jin +License: BSD-3-Clause + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions + are met: +(1) Redistributions of source code must retain the above copyright +notice, this list of conditions and the following disclaimer. +(2) Redistributions in binary form must reproduce the above copyright +notice, this list of conditions and the following disclaimer in the +documentation and/or other materials provided with the distribution. +(3) Neither the name of Georgetown University nor the +names of its contributors may be used to endorse or promote products +derived from this software without specific prior written permission. + . + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND + ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED + WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE + DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR + ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES + (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; + LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON + ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT + (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS + SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +Files: libs/nkidecompress +Copyright: Marcel van Herk and Lambert Zijp +License: public-domain + This work is available for public use. Modified: trunk/packages/plastimatch/t
[med-svn] r13714 - in trunk/packages/vxl/trunk/debian: . patches
Author: malat
Date: 2013-05-27 12:46:07 + (Mon, 27 May 2013)
New Revision: 13714
Removed:
trunk/packages/vxl/trunk/debian/README.Debian
Modified:
trunk/packages/vxl/trunk/debian/README.source
trunk/packages/vxl/trunk/debian/changelog
trunk/packages/vxl/trunk/debian/control
trunk/packages/vxl/trunk/debian/patches/opencl_unix.patch
trunk/packages/vxl/trunk/debian/patches/series
trunk/packages/vxl/trunk/debian/rules
Log:
New upload for VXL
Deleted: trunk/packages/vxl/trunk/debian/README.Debian
===
--- trunk/packages/vxl/trunk/debian/README.Debian 2013-05-27 12:35:59 UTC
(rev 13713)
+++ trunk/packages/vxl/trunk/debian/README.Debian 2013-05-27 12:46:07 UTC
(rev 13714)
@@ -1,5 +0,0 @@
-When building vxl from source, if you have opencl installed on your system
-the build system actually automatically detects those libs and will try to
build
-them
-
- -- Mathieu Malaterre Wed, 11 Apr 2012 10:21:29 +0200
Modified: trunk/packages/vxl/trunk/debian/README.source
===
--- trunk/packages/vxl/trunk/debian/README.source 2013-05-27 12:35:59 UTC
(rev 13713)
+++ trunk/packages/vxl/trunk/debian/README.source 2013-05-27 12:46:07 UTC
(rev 13714)
@@ -9,19 +9,6 @@
---
-Furthermore the package makes use of OpenCL. Since OpenCL is only available in
contrib
-the opencl related library are not installed. However when reduilding the
package, opencl
-is properly detected by cmake:
-
-# apt-get install nvidia-cuda-dev
-$ cd vxl
-$ dpkg-buildpackage -rfakeroot
-...
--- Found Open Cl? YES
-...
-
-
Tests have been deactivated for now, they fails on amd64 with:
The following tests FAILED:
Modified: trunk/packages/vxl/trunk/debian/changelog
===
--- trunk/packages/vxl/trunk/debian/changelog 2013-05-27 12:35:59 UTC (rev
13713)
+++ trunk/packages/vxl/trunk/debian/changelog 2013-05-27 12:46:07 UTC (rev
13714)
@@ -1,3 +1,11 @@
+vxl (1.17.0-4) unstable; urgency=low
+
+ * Fix builds on arm* by removing duplicate symbols
+ * Re-activate testing. Closes: #671601
+ * Build OpenCL modules. Closes: #697784
+
+ -- Mathieu Malaterre Mon, 27 May 2013 14:11:24 +0200
+
vxl (1.17.0-3) unstable; urgency=low
* Import old patch and avoid name clash. Closes: #708666, #708668
Modified: trunk/packages/vxl/trunk/debian/control
===
--- trunk/packages/vxl/trunk/debian/control 2013-05-27 12:35:59 UTC (rev
13713)
+++ trunk/packages/vxl/trunk/debian/control 2013-05-27 12:46:07 UTC (rev
13714)
@@ -9,7 +9,7 @@
libdcmtk2-dev, libpng-dev, libjpeg-dev, zlib1g-dev, libexpat-dev, python-dev
(>= 2.6.6-3~),
libgeotiff-dev, libcoin60-dev, libdc1394-22-dev [!kfreebsd-i386
!kfreebsd-amd64 !hurd-i386],
libqt4-dev, libxerces-c-dev, libglu-dev, libqt4-opengl-dev, libshp-dev,
opencl-headers, libavifile-0.7-dev,
- libmpeg2-4-dev, libswscale-dev, libavformat-dev, libavcodec-dev, libbz2-dev,
freeglut3-dev
+ libmpeg2-4-dev, libswscale-dev, libavformat-dev, libavcodec-dev, libbz2-dev,
freeglut3-dev, ocl-icd-opencl-dev
Standards-Version: 3.9.4
X-Python-Version: 2.7
Vcs-Browser:
http://anonscm.debian.org/viewvc/debian-med/trunk/packages/vxl/trunk/
Modified: trunk/packages/vxl/trunk/debian/patches/opencl_unix.patch
===
--- trunk/packages/vxl/trunk/debian/patches/opencl_unix.patch 2013-05-27
12:35:59 UTC (rev 13713)
+++ trunk/packages/vxl/trunk/debian/patches/opencl_unix.patch 2013-05-27
12:46:07 UTC (rev 13714)
@@ -3,38 +3,16 @@
Last-Update: 2011-07-24
Bug: http://sourceforge.net/apps/trac/vxl/ticket/64
-Index: vxl-1.14.0/contrib/brl/bmods/find_open_cl.cmake
+Index: vxl-1.17.0/config/cmake/Modules/NewCMake/FindOpenCL.cmake
===
vxl-1.14.0.orig/contrib/brl/bmods/find_open_cl.cmake 2009-12-04
17:54:32.0 +0100
-+++ vxl-1.14.0/contrib/brl/bmods/find_open_cl.cmake2011-04-13
18:30:36.0 +0200
-@@ -33,6 +33,15 @@
- SET(OPENCL_LIBRARIES ${OPENCL_LIBRARY})
- ENDIF(OPENCL_LIBRARY)
- ENDIF(OPENCL_INCLUDE_PATH)
-+ELSEIF(UNIX)
-+ FIND_PATH(OPENCL_INCLUDE_PATH CL/cl.h "Include for OpenCL on OSX")
-+ IF(OPENCL_INCLUDE_PATH)
-+FIND_LIBRARY(OPENCL_LIBRARY cuda "OpenCL lib for OSX")
-+IF(OPENCL_LIBRARY)
-+ SET(OPENCL_FOUND "YES")
-+ SET(OPENCL_LIBRARIES ${OPENCL_LIBRARY})
-+ENDIF(OPENCL_LIBRARY)
-+ ENDIF(OPENCL_INCLUDE_PATH)
- ENDIF (APPLE)
+--- vxl-1.17.0.orig/config/cmake/Modules/NewCMake/FindOpenCL.cmake
2010-11-01 03:33:00.0 +
vxl-1.17.0/config/cmake/Modules/NewCMake/FindOpenCL.cmake 2013-05-27
12:33:00.491853556 +
+@@ -71,7 +71,7 @@
- MESSAGE(STATUS "Found Open Cl? ${OPENCL_FOUND}")
-Index: vxl-1.14.0/cont
[med-svn] r13713 - in trunk/packages/igraph/tags: . 0.6.5-2/debian
Author: malat Date: 2013-05-27 12:35:59 + (Mon, 27 May 2013) New Revision: 13713 Added: trunk/packages/igraph/tags/0.6.5-2/ Modified: trunk/packages/igraph/tags/0.6.5-2/debian/changelog Log: [svn-buildpackage] Tagging igraph 0.6.5-2 Modified: trunk/packages/igraph/tags/0.6.5-2/debian/changelog === --- trunk/packages/igraph/trunk/debian/changelog2013-05-26 16:51:09 UTC (rev 13712) +++ trunk/packages/igraph/tags/0.6.5-2/debian/changelog 2013-05-27 12:35:59 UTC (rev 13713) @@ -1,3 +1,9 @@ +igraph (0.6.5-2) unstable; urgency=low + + * Upload to sid + + -- Mathieu Malaterre Mon, 27 May 2013 14:01:54 +0200 + igraph (0.6.5-1) experimental; urgency=low * New upstream ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [SCM] miaviewit branch, master, updated. upstream/1.0.0-8-g8cc10e4
The following commit has been merged in the master branch: commit 8cc10e490a59ff34c5659c65454e53d21a738fa9 Author: Gert Wollny Date: Mon May 27 10:52:22 2013 +0200 remove dependency on libpangox-1.0-dev because it's only there because of #709554 diff --git a/debian/control b/debian/control index 15976ed..1846681 100644 --- a/debian/control +++ b/debian/control @@ -2,7 +2,7 @@ Source: miaviewit Section: science Priority: optional Maintainer: Gert Wollny -Build-Depends: debhelper (>= 9.0.0), autotools-dev, libmia-2.0-dev (>= 2.0.8), libgle3-dev, libgtkglextmm-x11-1.2-dev, libgtkmm-2.4-dev, libvistaio-dev, libpangox-1.0-dev [powerpc] +Build-Depends: debhelper (>= 9.0.0), autotools-dev, libmia-2.0-dev (>= 2.0.8), libgle3-dev, libgtkglextmm-x11-1.2-dev, libgtkmm-2.4-dev, libvistaio-dev Standards-Version: 3.9.4 Homepage: http://mia.sourceforge.net Vcs-Git:git://git.debian.org/debian-med/miaviewit.git -- Packaging of miaviewit in Debian ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
