[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
386199c6 by Andreas Tille at 2020-12-11T01:46:04+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=
debian-med-tests.txt
=
@@ -1,4 +1,4 @@
-Last-Update: Thu, 10 Dec 2020 13:42:04 +
+Last-Update: Fri, 11 Dec 2020 01:42:04 +
 
  Source| Vote   | Tasks
   | Tags   
  
 
---++-+--


=
outdated_med-packages.txt
=
The diff for this file was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/386199c63a568be3846735faed6edcc16d7e95fb

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[med-svn] [Git][med-team/q2-fragment-insertion][master] Added helper script, added runtim deps

2020-12-10 Thread Steffen Möller


Steffen Möller pushed to branch master at Debian Med / q2-fragment-insertion


Commits:
8281fea2 by Steffen Möller at 2020-12-11T01:36:33+01:00
Added helper script, added runtim deps

- - - - -


3 changed files:

- debian/control
- + debian/q2-fragment-insertion.dirs
- + debian/q2-fragment-insertion.install


Changes:

=
debian/control
=
@@ -23,6 +23,10 @@ Depends: ${shlibs:Depends},
  ${misc:Depends},
  ${python3:Depends},
  qiime (>= 2020.11.0)
+Recommends: sepp,
+python3-ijson,
+default-jdk,
+q2-types (>= 2020.11.1)
 Description: QIIME 2 plugin for fragment insertion
  QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
  package with a focus on data and analysis transparency. QIIME 2 enables


=
debian/q2-fragment-insertion.dirs
=
@@ -0,0 +1 @@
+usr/share/q2-fragment-insertion


=
debian/q2-fragment-insertion.install
=
@@ -0,0 +1 @@
+bin/*  usr/share/q2-fragment-insertion/



View it on GitLab: 
https://salsa.debian.org/med-team/q2-fragment-insertion/-/commit/8281fea22d641e7ba78611dc9f19d4dc079bcc36

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[med-svn] [Git][med-team/kmc][master] remove -m64 build option

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch master at Debian Med / kmc


Commits:
7f6dd3e1 by Étienne Mollier at 2020-12-11T00:08:52+01:00
remove -m64 build option

It has been put back by error.  Although alone, this does not fix
portability issues, it is one less problem to deal with.

- - - - -


3 changed files:

- debian/changelog
- debian/patches/0005-Add-static-library-target-to-makefile.patch
- debian/patches/makefile.patch


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+kmc (3.1.1+dfsg-2) UNRELEASED; urgency=medium
+
+  * Remove non-portable -m64 flag put back by error.
+
+ -- Étienne Mollier   Fri, 11 Dec 2020 00:07:16 
+0100
+
 kmc (3.1.1+dfsg-1) unstable; urgency=medium
 
   * Added myself to Uploaders.


=
debian/patches/0005-Add-static-library-target-to-makefile.patch
=
@@ -15,11 +15,11 @@ From: Kevin Murray 
  KMC_MAIN_DIR = kmer_counter
 @@ -9,6 +9,7 @@
  
- KMC_TOOLS_CXXFLAGS := $(CXXFLAGS) -Wall -O3 -m64
+ KMC_TOOLS_CXXFLAGS := $(CXXFLAGS) -Wall -O3
  KMC_TOOLS_LDFLAGS  := $(LDFLAGS) -lm -O3 -lpthread -std=c++14 -lz -lbz2
 +KMC_LIB_OBJS = $(sort $(wildcard $(KMC_API_DIR)/*.o))
  
- CXXFLAGS += -Wall -O3 -m64
+ CXXFLAGS += -Wall -O3
  LDFLAGS  += -lm -O3 -lpthread -std=c++11 -lz -lbz2
 @@ -97,6 +98,10 @@
-I `python3 -c "import 
sysconfig;print(sysconfig.get_paths()['include'])"` \


=
debian/patches/makefile.patch
=
@@ -14,12 +14,12 @@ From: Debian Med Packaging Team 

 -CC= g++
 -CFLAGS= -Wall -O3 -m64 -static -Wl,--whole-archive -lpthread 
-Wl,--no-whole-archive -std=c++11
 -CLINK = -lm -static -O3 -Wl,--whole-archive -lpthread -Wl,--no-whole-archive 
-std=c++11
-+KMC_TOOLS_CXXFLAGS := $(CXXFLAGS) -Wall -O3 -m64
++KMC_TOOLS_CXXFLAGS := $(CXXFLAGS) -Wall -O3
 +KMC_TOOLS_LDFLAGS  := $(LDFLAGS) -lm -O3 -lpthread -std=c++14 -lz -lbz2
  
 -KMC_TOOLS_CFLAGS  = -Wall -O3 -m64 -static -Wl,--whole-archive -lpthread 
-Wl,--no-whole-archive -std=c++14
 -KMC_TOOLS_CLINK   = -lm -static -O3 -Wl,--whole-archive -lpthread 
-Wl,--no-whole-archive -std=c++14
-+CXXFLAGS += -Wall -O3 -m64
++CXXFLAGS += -Wall -O3
 +LDFLAGS  += -lm -O3 -lpthread -std=c++11 -lz -lbz2
  
  KMC_OBJS = \
@@ -65,7 +65,7 @@ From: Debian Med Packaging Team 

  
  $(PY_KMC_API_DIR)/%.o: $(KMC_API_DIR)/%.cpp
 -  $(CC) -c -fPIC -Wall -O3 -m64 -std=c++11 $^ -o $@
-+  $(CXX) $(CPPFLAGS) $(CXXFLAGS) -c -fPIC -Wall -O3 -m64 -std=c++11 $^ -o 
$@
++  $(CXX) $(CPPFLAGS) $(CXXFLAGS) -c -fPIC -Wall -O3 -std=c++11 $^ -o $@
  
  py_kmc_api: $(PY_KMC_API_OBJS) $(PY_KMC_API_OBJS)
-mkdir -p $(KMC_BIN_DIR)



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[med-svn] [Git][med-team/cwltool] Pushed new tag upstream/3.0.20201203173111

2020-12-10 Thread Andreas Tille


Andreas Tille pushed new tag upstream/3.0.20201203173111 at Debian Med / cwltool

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[med-svn] [Git][med-team/cwltool] Pushed new tag debian/3.0.20200807132242-3

2020-12-10 Thread Andreas Tille


Andreas Tille pushed new tag debian/3.0.20200807132242-3 at Debian Med / cwltool

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[med-svn] [Git][med-team/cwltool][upstream] New upstream version 3.0.20201203173111

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch upstream at Debian Med / cwltool


Commits:
f639d58e by Andreas Tille at 2020-12-10T22:09:30+01:00
New upstream version 3.0.20201203173111
- - - - -


30 changed files:

- MANIFEST.in
- Makefile
- PKG-INFO
- README.rst
- cwltool.egg-info/PKG-INFO
- cwltool.egg-info/SOURCES.txt
- cwltool.egg-info/requires.txt
- cwltool.py
- cwltool/argparser.py
- cwltool/builder.py
- cwltool/command_line_tool.py
- cwltool/context.py
- cwltool/cwlrdf.py
- cwltool/cwlviewer.py
- cwltool/docker.py
- cwltool/executors.py
- cwltool/expression.py
- cwltool/job.py
- cwltool/load_tool.py
- cwltool/main.py
- cwltool/mpi.py
- cwltool/pack.py
- cwltool/pathmapper.py
- cwltool/process.py
- cwltool/procgenerator.py
- cwltool/provenance.py
- cwltool/provenance_profile.py
- + cwltool/py.typed
- cwltool/singularity.py
- cwltool/software_requirements.py


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/cwltool/-/commit/f639d58e54f69f7ca6ebfe9f6ef4922c51c6ded0

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[med-svn] [Git][med-team/cwltool][master] 4 commits: Abbreviated option names are no longer allowed in pytest 6

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / cwltool


Commits:
61bf7f44 by Andreas Tille at 2020-12-10T22:08:01+01:00
Abbreviated option names are no longer allowed in pytest 6

- - - - -
3a42d022 by Andreas Tille at 2020-12-10T22:09:11+01:00
Abbreviated option names are no longer allowed in pytest 6 (in Debian packaging)

- - - - -
ca989c27 by Andreas Tille at 2020-12-10T22:18:53+01:00
Standards-Version: 4.5.1

- - - - -
81c96a9a by Andreas Tille at 2020-12-10T22:24:03+01:00
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- + debian/patches/pytest6.patch
- debian/patches/series
- debian/rules
- debian/tests/run-tests


Changes:

=
debian/changelog
=
@@ -1,3 +1,12 @@
+cwltool (3.0.20200807132242-3) unstable; urgency=medium
+
+  * Team upload.
+  * Abbreviated option names are no longer allowed in pytest 6
+Closes: #977067
+  * Standards-Version: 4.5.1
+
+ -- Andreas Tille   Thu, 10 Dec 2020 22:19:00 +0100
+
 cwltool (3.0.20200807132242-2) unstable; urgency=medium
 
   * Team upload.


=
debian/control
=
@@ -30,7 +30,7 @@ Build-Depends: debhelper-compat (= 13),
python3-pydot,
nodejs,
help2man
-Standards-Version: 4.5.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/cwltool
 Vcs-Git: https://salsa.debian.org/med-team/cwltool.git
 Homepage: https://www.commonwl.org


=
debian/patches/pytest6.patch
=
@@ -0,0 +1,38 @@
+Description: Abbreviated option names are no longer allowed in pytest 6
+Bug-Debian: https://bugs.debian.org/977067
+Author: Andreas Tille 
+Last-Update Thu, 10 Dec 2020 22:06:24 +0100
+
+--- a/PKG-INFO
 b/PKG-INFO
+@@ -609,7 +609,7 @@ Description: ===
+ .. code:: bash
+ 
+   pip install -rtest-requirements.txt
+-  py.test --ignore cwltool/schemas/ --pyarg cwltool
++  py.test --ignore cwltool/schemas/ --pyargs cwltool
+ 
+ To run various tests in all supported Python environments we use `tox 
`_. To 
run the test suite in all supported Python environments
+ first downloading the complete code repository (see the ``git clone`` 
instructions above) and then run
+--- a/README.rst
 b/README.rst
+@@ -600,7 +600,7 @@ To run the basic tests after installing
+ .. code:: bash
+ 
+   pip install -rtest-requirements.txt
+-  py.test --ignore cwltool/schemas/ --pyarg cwltool
++  py.test --ignore cwltool/schemas/ --pyargs cwltool
+ 
+ To run various tests in all supported Python environments we use `tox 
`_. To 
run the test suite in all supported Python environments
+ first downloading the complete code repository (see the ``git clone`` 
instructions above) and then run
+--- a/cwltool.egg-info/PKG-INFO
 b/cwltool.egg-info/PKG-INFO
+@@ -609,7 +609,7 @@ Description: ===
+ .. code:: bash
+ 
+   pip install -rtest-requirements.txt
+-  py.test --ignore cwltool/schemas/ --pyarg cwltool
++  py.test --ignore cwltool/schemas/ --pyargs cwltool
+ 
+ To run various tests in all supported Python environments we use `tox 
`_. To 
run the test suite in all supported Python environments
+ first downloading the complete code repository (see the ``git clone`` 
instructions above) and then run


=
debian/patches/series
=
@@ -4,3 +4,4 @@ disable_prov
 python3
 pytest
 accept_newer_ruamel
+pytest6.patch


=
debian/rules
=
@@ -35,5 +35,5 @@ ifeq (,$(filter nocheck,$(DEB_BUILD_PROFILES)))
PYBUILD_TEST_ARGS="cd {dir}; export PATH={destdir}/usr/bin:$$PATH ; \
cd {build_dir}; export PYTHONPATH=$$(pwd); {interpreter} -m pytest \
-k 'not test_http_path_mapping and not test_pack and not 
test_get_subgraph and not TestUdocker and not test_use_metadata and not 
test_load_graph_fragment_from_packed' \
-   -n auto --dist=loadfile --ignore cwltool/schemas/ -s --pyarg 
cwltool" dh_auto_test
+   -n auto --dist=loadfile --ignore cwltool/schemas/ -s --pyargs 
cwltool" dh_auto_test
 endif


=
debian/tests/run-tests
=
@@ -15,4 +15,4 @@ SKIPS=
 #  SKIPS="-k 'not test_use_metadata'"
 # fi
 py.test-3 --numprocesses=auto --dist=loadfile --ignore=cwltool/schemas -s \
-   -k 'not TestUdocker and not test_use_metadata' --pyarg cwltool
+   -k 'not

[med-svn] [Git][med-team/cwltool][pristine-tar] pristine-tar data for cwltool_3.0.20201203173111.orig.tar.gz

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch pristine-tar at Debian Med / cwltool


Commits:
8d60b672 by Andreas Tille at 2020-12-10T22:09:36+01:00
pristine-tar data for cwltool_3.0.20201203173111.orig.tar.gz

- - - - -


2 changed files:

- + cwltool_3.0.20201203173111.orig.tar.gz.delta
- + cwltool_3.0.20201203173111.orig.tar.gz.id


Changes:

=
cwltool_3.0.20201203173111.orig.tar.gz.delta
=
Binary files /dev/null and b/cwltool_3.0.20201203173111.orig.tar.gz.delta differ


=
cwltool_3.0.20201203173111.orig.tar.gz.id
=
@@ -0,0 +1 @@
+74c319820be27bd50cf34584fad6380ff67ed0f3



View it on GitLab: 
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[med-svn] [Git][med-team/kmc][master] Added myself to Uploaders

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch master at Debian Med / kmc


Commits:
850afb8a by Étienne Mollier at 2020-12-10T22:22:57+01:00
Added myself to Uploaders

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=
debian/changelog
=
@@ -1,6 +1,6 @@
 kmc (3.1.1+dfsg-1) unstable; urgency=medium
 
-  * Team upload.
+  * Added myself to Uploaders.
   * New upstream version (Closes: #954270)
   * Remove changes related to asmlib, not used upstream anymore.
   * Refresh use-shared-libs patch.


=
debian/control
=
@@ -3,7 +3,8 @@ Maintainer: Debian Med Packaging Team 
,
Jorge Soares ,
Sascha Steinbiss ,
-   Kevin Murray 
+   Kevin Murray ,
+   Étienne Mollier 
 Section: science
 Priority: optional
 Build-Depends: debhelper-compat (= 13),



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[med-svn] [Git][med-team/kmc] Pushed new tag debian/3.1.1+dfsg-1

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed new tag debian/3.1.1+dfsg-1 at Debian Med / kmc

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[med-svn] [Git][med-team/kmc] Deleted tag debian/3.1.1+dfsg-1

2020-12-10 Thread Étienne Mollier


Étienne Mollier deleted tag debian/3.1.1+dfsg-1 at Debian Med / kmc

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[med-svn] [Git][med-team/kmc][master] New upstream version closes: #954270

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch master at Debian Med / kmc


Commits:
8e0202a8 by Étienne Mollier at 2020-12-10T22:04:28+01:00
New upstream version closes: #954270

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,7 +1,7 @@
 kmc (3.1.1+dfsg-1) unstable; urgency=medium
 
   * Team upload.
-  * New upstream version
+  * New upstream version (Closes: #954270)
   * Remove changes related to asmlib, not used upstream anymore.
   * Refresh use-shared-libs patch.
   * Fold patches to makefile into makefile.patch.



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[med-svn] [Git][med-team/kmc] Pushed new tag debian/3.1.1+dfsg-1

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed new tag debian/3.1.1+dfsg-1 at Debian Med / kmc

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[med-svn] [Git][med-team/kmc] Deleted tag debian/3.1.1+dfsg-1

2020-12-10 Thread Étienne Mollier


Étienne Mollier deleted tag debian/3.1.1+dfsg-1 at Debian Med / kmc

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[med-svn] [Git][med-team/kmc] Pushed new tag upstream/3.1.1+dfsg

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed new tag upstream/3.1.1+dfsg at Debian Med / kmc

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[med-svn] [Git][med-team/kmc] Pushed new tag debian/3.1.1+dfsg-1

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed new tag debian/3.1.1+dfsg-1 at Debian Med / kmc

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[med-svn] [Git][med-team/kmc][master] 18 commits: routine-update: New upstream version

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch master at Debian Med / kmc


Commits:
32303009 by Étienne Mollier at 2020-12-10T19:04:20+01:00
routine-update: New upstream version

- - - - -
04f09c95 by Étienne Mollier at 2020-12-10T19:04:42+01:00
New upstream version 3.1.1+dfsg
- - - - -
3ee5a72c by Étienne Mollier at 2020-12-10T19:04:43+01:00
Update upstream source from tag 'upstream/3.1.1+dfsg'

Update to upstream version '3.1.1+dfsg'
with Debian dir bd0edbf230bd4e87026951567e49316a789b5d64
- - - - -
ae95d101 by Étienne Mollier at 2020-12-10T19:19:59+01:00
begin removal of refs to asmlib

- - - - -
106ef89a by Étienne Mollier at 2020-12-10T19:24:47+01:00
Refresh use-shared-libs patch

- - - - -
8d8c99db by Étienne Mollier at 2020-12-10T19:47:32+01:00
Fold patches to makefile into makefile.patch

- - - - -
bdbfaf39 by Étienne Mollier at 2020-12-10T19:55:48+01:00
Refresh 0005-Add-static-library-target-to-makefile.patch

- - - - -
5e15a770 by Étienne Mollier at 2020-12-10T20:03:21+01:00
Deleted spelling patch

- - - - -
5a8c5c32 by Étienne Mollier at 2020-12-10T20:04:49+01:00
Refresh patch newish_gcc_build_fix.patch

- - - - -
f8352853 by Étienne Mollier at 2020-12-10T20:06:40+01:00
Removed patch cap-default-thread-count.patch

- - - - -
ba198fad by Étienne Mollier at 2020-12-10T20:09:02+01:00
Activated highly threaded test in autopkgtest

- - - - -
515584f7 by Étienne Mollier at 2020-12-10T20:28:30+01:00
remove extra linker options

- - - - -
46c1e49e by Étienne Mollier at 2020-12-10T20:31:28+01:00
Disable the newer python3 bindings

- - - - -
cb6788f7 by Étienne Mollier at 2020-12-10T21:32:20+01:00
general build flags cleanup

- - - - -
760fe6ea by Étienne Mollier at 2020-12-10T21:34:07+01:00
increase autopkgtest stress to 512 threads

- - - - -
8ed6d1f3 by Étienne Mollier at 2020-12-10T21:37:19+01:00
Wrote new spelling.patch

- - - - -
35f92f1d by Étienne Mollier at 2020-12-10T21:44:00+01:00
add dep3 header to disable-python-bindings.patch

- - - - -
9a41059a by Étienne Mollier at 2020-12-10T22:01:55+01:00
routine-update: Ready to upload to unstable

- - - - -


30 changed files:

- .gitignore
- README.md
- + debian/TODO
- debian/changelog
- debian/patches/0005-Add-static-library-target-to-makefile.patch
- − debian/patches/0007-Use-standard-compiler-environment-variables.patch
- − debian/patches/cap-default-thread-count.patch
- − debian/patches/disable-asmlib
- + debian/patches/disable-python-bindings.patch
- − debian/patches/hardening
- + debian/patches/makefile.patch
- debian/patches/newish_gcc_build_fix.patch
- debian/patches/series
- − debian/patches/spelling
- + debian/patches/spelling.patch
- debian/patches/use-shared-libs
- debian/tests/build-lib
- + doc/kmc_tools/complex.tex
- + doc/kmc_tools/filter_operation.tex
- + doc/kmc_tools/intro.tex
- + doc/kmc_tools/kmc_tools.tex
- + doc/kmc_tools/simple.tex
- + doc/kmc_tools/transform.tex
- + doc/kmc_tools/usage.tex
- kmc_api/kmc_file.cpp
- kmc_api/kmc_file.h
- kmc_api/kmer_api.cpp
- kmc_api/kmer_api.h
- kmc_api/kmer_defs.h
- kmc_api/mmer.cpp


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/kmc/-/compare/34231fb9309ff6967bc1e93a34a0fe6f0d5334b4...9a41059a7180c91896ffc463b4a0256c5defd434

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[med-svn] [Git][med-team/kmc][upstream] New upstream version 3.1.1+dfsg

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch upstream at Debian Med / kmc


Commits:
04f09c95 by Étienne Mollier at 2020-12-10T19:04:42+01:00
New upstream version 3.1.1+dfsg
- - - - -


30 changed files:

- .gitignore
- README.md
- + doc/kmc_tools/complex.tex
- + doc/kmc_tools/filter_operation.tex
- + doc/kmc_tools/intro.tex
- + doc/kmc_tools/kmc_tools.tex
- + doc/kmc_tools/simple.tex
- + doc/kmc_tools/transform.tex
- + doc/kmc_tools/usage.tex
- kmc_api/kmc_file.cpp
- kmc_api/kmc_file.h
- kmc_api/kmer_api.cpp
- kmc_api/kmer_api.h
- kmc_api/kmer_defs.h
- kmc_api/mmer.cpp
- kmc_api/mmer.h
- kmc_api/stdafx.h
- kmc_dump/kmc_dump.cpp
- kmc_dump/kmc_dump.vcxproj
- kmc_dump/nc_utils.cpp
- kmc_dump/nc_utils.h
- kmc_dump_sample/kmc_dump_sample.cpp
- kmc_dump_sample/kmc_dump_sample.vcxproj
- kmc_tools/bundle.h
- + kmc_tools/check_kmer.h
- kmc_tools/config.h
- kmc_tools/defs.h
- + kmc_tools/develop.h
- kmc_tools/dump_writer.h
- kmc_tools/expression_node.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/kmc/-/commit/04f09c95b8d166c58f4bd7804ce911e4bdb4e097

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[med-svn] [Git][med-team/kmc][pristine-tar] pristine-tar data for kmc_3.1.1+dfsg.orig.tar.xz

2020-12-10 Thread Étienne Mollier


Étienne Mollier pushed to branch pristine-tar at Debian Med / kmc


Commits:
d8dbeae2 by Étienne Mollier at 2020-12-10T19:04:43+01:00
pristine-tar data for kmc_3.1.1+dfsg.orig.tar.xz

- - - - -


2 changed files:

- + kmc_3.1.1+dfsg.orig.tar.xz.delta
- + kmc_3.1.1+dfsg.orig.tar.xz.id


Changes:

=
kmc_3.1.1+dfsg.orig.tar.xz.delta
=
Binary files /dev/null and b/kmc_3.1.1+dfsg.orig.tar.xz.delta differ


=
kmc_3.1.1+dfsg.orig.tar.xz.id
=
@@ -0,0 +1 @@
+cbc453844106f05b2b4ca2a5e9a9852ed9e4fb3d



View it on GitLab: 
https://salsa.debian.org/med-team/kmc/-/commit/d8dbeae2cbfd11d095b3ff71b06c3586852aa415

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[med-svn] [Git][med-team/orthanc-webviewer] Pushed new tag upstream/2.7

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed new tag upstream/2.7 at Debian Med / orthanc-webviewer

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[med-svn] [Git][med-team/orthanc-webviewer][upstream] New upstream version 2.7

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed to branch upstream at Debian Med / orthanc-webviewer


Commits:
b30de78e by jodogne-guest at 2020-12-10T18:04:45+01:00
New upstream version 2.7
- - - - -


24 changed files:

- .hg_archival.txt
- + .hgignore
- CMakeLists.txt
- NEWS
- Plugin/Cache/CacheIndex.h
- Plugin/Cache/CacheManager.cpp
- Plugin/Cache/CacheManager.h
- Plugin/Cache/CacheScheduler.cpp
- Plugin/Cache/CacheScheduler.h
- Plugin/DecodedImageAdapter.cpp
- Plugin/DecodedImageAdapter.h
- Plugin/Plugin.cpp
- Plugin/SeriesInformationAdapter.cpp
- Plugin/SeriesInformationAdapter.h
- Plugin/ViewerPrefetchPolicy.h
- Plugin/ViewerToolbox.cpp
- Plugin/ViewerToolbox.h
- + Resources/Orthanc/CMake/AutoGeneratedCode.cmake
- + Resources/Orthanc/CMake/Compiler.cmake
- Resources/Orthanc/DownloadOrthancFramework.cmake → 
Resources/Orthanc/CMake/DownloadOrthancFramework.cmake
- + Resources/Orthanc/CMake/DownloadPackage.cmake
- + Resources/Orthanc/CMake/EmbedResources.py
- + Resources/Orthanc/CMake/GoogleTestConfiguration.cmake
- + Resources/Orthanc/Plugins/ExportedSymbolsPlugins.list


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/orthanc-webviewer/-/commit/b30de78ee9081fdd6d24890b71e1a30977f72d67

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[med-svn] [Git][med-team/orthanc-webviewer] Pushed new tag debian/2.7-1

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed new tag debian/2.7-1 at Debian Med / orthanc-webviewer

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[med-svn] [Git][med-team/orthanc-webviewer][pristine-tar] pristine-tar data for orthanc-webviewer_2.7.orig.tar.xz

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed to branch pristine-tar at Debian Med / 
orthanc-webviewer


Commits:
7e82a114 by jodogne-guest at 2020-12-10T18:04:45+01:00
pristine-tar data for orthanc-webviewer_2.7.orig.tar.xz

- - - - -


2 changed files:

- + orthanc-webviewer_2.7.orig.tar.xz.delta
- + orthanc-webviewer_2.7.orig.tar.xz.id


Changes:

=
orthanc-webviewer_2.7.orig.tar.xz.delta
=
Binary files /dev/null and b/orthanc-webviewer_2.7.orig.tar.xz.delta differ


=
orthanc-webviewer_2.7.orig.tar.xz.id
=
@@ -0,0 +1 @@
+3d136f8e75ce38d6a4ae302763781eb15169d817



View it on GitLab: 
https://salsa.debian.org/med-team/orthanc-webviewer/-/commit/7e82a1148b65ded58a6a7083edf66f1ce170367f

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[med-svn] [Git][med-team/orthanc-webviewer][master] 5 commits: New upstream version 2.7

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed to branch master at Debian Med / orthanc-webviewer


Commits:
b30de78e by jodogne-guest at 2020-12-10T18:04:45+01:00
New upstream version 2.7
- - - - -
1f329da6 by jodogne-guest at 2020-12-10T18:04:45+01:00
Update upstream source from tag 'upstream/2.7'

Update to upstream version '2.7'
with Debian dir 6a5e5b1af7438862a6b9280714fe5898aa7cdd93
- - - - -
f1ea8af1 by jodogne-guest at 2020-12-10T18:06:50+01:00
new upstream version 2.7

- - - - -
cfe61483 by jodogne-guest at 2020-12-10T18:15:27+01:00
Dynamic linking against "liborthancframework*"

- - - - -
ac067ead by jodogne-guest at 2020-12-10T18:29:11+01:00
Upload to unstable

- - - - -


24 changed files:

- .hg_archival.txt
- + .hgignore
- CMakeLists.txt
- NEWS
- Plugin/Cache/CacheIndex.h
- Plugin/Cache/CacheManager.cpp
- Plugin/Cache/CacheManager.h
- Plugin/Cache/CacheScheduler.cpp
- Plugin/Cache/CacheScheduler.h
- Plugin/DecodedImageAdapter.cpp
- Plugin/DecodedImageAdapter.h
- Plugin/Plugin.cpp
- Plugin/SeriesInformationAdapter.cpp
- Plugin/SeriesInformationAdapter.h
- Plugin/ViewerPrefetchPolicy.h
- Plugin/ViewerToolbox.cpp
- Plugin/ViewerToolbox.h
- + Resources/Orthanc/CMake/AutoGeneratedCode.cmake
- + Resources/Orthanc/CMake/Compiler.cmake
- Resources/Orthanc/DownloadOrthancFramework.cmake → 
Resources/Orthanc/CMake/DownloadOrthancFramework.cmake
- + Resources/Orthanc/CMake/DownloadPackage.cmake
- + Resources/Orthanc/CMake/EmbedResources.py
- + Resources/Orthanc/CMake/GoogleTestConfiguration.cmake
- + Resources/Orthanc/Plugins/ExportedSymbolsPlugins.list


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/orthanc-webviewer/-/compare/b5e8d2ec2b8e991565b73310a387fb17f89d7e0a...ac067ead54dd93de950f5392e994f94a37b9cb59

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[med-svn] [Git][med-team/bolt-lmm] Pushed new branch simde

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed new branch simde at Debian Med / bolt-lmm

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[med-svn] [Git][med-team/libfastahack][master] 3 commits: make .symbols file more resilient in handling of template symbols

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / libfastahack


Commits:
75ad5b13 by Andreas Tille at 2020-12-10T12:30:39+01:00
make .symbols file more resilient in handling of template symbols

- - - - -
543adaeb by Andreas Tille at 2020-12-10T12:31:24+01:00
routine-update: Standards-Version: 4.5.1

- - - - -
c2233eb2 by Andreas Tille at 2020-12-10T12:32:54+01:00
routine-update: Ready to upload to unstable

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/libfastahack0.symbols


Changes:

=
debian/changelog
=
@@ -1,3 +1,12 @@
+libfastahack (1.0.0+dfsg-7) unstable; urgency=medium
+
+  * make .symbols file more resilient in handling of template symbols
+(Thanks for the patch to Steve Langasek)
+Closes: #976999
+  * Standards-Version: 4.5.1 (routine-update)
+
+ -- Andreas Tille   Thu, 10 Dec 2020 12:31:30 +0100
+
 libfastahack (1.0.0+dfsg-6) unstable; urgency=medium
 
   * Standards-Version: 4.5.0 (routine-update)


=
debian/control
=
@@ -7,7 +7,7 @@ Build-Depends: debhelper-compat (= 13),
d-shlibs,
libdisorder-dev,
help2man
-Standards-Version: 4.5.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/libfastahack
 Vcs-Git: https://salsa.debian.org/med-team/libfastahack.git
 Homepage: https://github.com/ekg/fastahack


=
debian/libfastahack0.symbols
=
@@ -32,11 +32,14 @@ libfastahack.so.0 libfastahack0 #MINVER#
  _ZN15FastaIndexEntryD1Ev@Base 0.0+git20160702.bbc645f
  _ZN15FastaIndexEntryD2Ev@Base 0.0+git20160702.bbc645f
  _ZNKSt5ctypeIcE8do_widenEc@Base 0.0+git20160702.bbc645f
+ 
(optional)_ZNSt12_Destroy_auxILb0EE9__destroyIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEvT_S9_@Base
 1.0.0+dfsg
+ 
(optional)_ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE15FastaIndexEntryED1Ev@Base
 1.0.0+dfsg
+ 
(optional)_ZNSt4pairINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE15FastaIndexEntryED2Ev@Base
 1.0.0+dfsg
  
_ZNSt6vectorI15FastaIndexEntrySaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_@Base
 0.0+git20160702.bbc645f
  
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base
 0.0+git20160702.bbc645f
  
(optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_@Base
 0.0+git20160702.bbc645f
- 
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC1ERKS7_@Base
 1.0.0+dfsg
- 
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC2ERKS7_@Base
 1.0.0+dfsg
+ 
(optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC1ERKS7_@Base
 1.0.0+dfsg
+ 
(optional)_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EEC2ERKS7_@Base
 1.0.0+dfsg
  
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev@Base
 0.0+git20160702.bbc645f
  
_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev@Base
 0.0+git20160702.bbc645f
  
_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_15FastaIndexEntryESt10_Select1stIS9_ESt4lessIS5_ESaIS9_EE17_M_emplace_uniqueIJS6_IS5_S8_S6_ISt17_Rb_tree_iteratorIS9_EbEDpOT_@Base
 0.0+git20160702.bbc645f
@@ -48,7 +51,7 @@ libfastahack.so.0 libfastahack0 #MINVER#
  
_ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_NS0_5__ops15_Iter_comp_iterIPFbS2_S2_vT_SD_SD_T0_@Base
 1.0.0+dfsg
  
_ZSt16__insertion_sortIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_NS0_5__ops15_Iter_comp_iterIPFbS2_S2_vT_SD_T0_@Base
 0.0+git20160702.bbc645f
  
_ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_lNS0_5__ops15_Iter_comp_iterIPFbS2_S2_vT_SD_T0_T1_@Base
 0.0+git20160702.bbc645f
- 
_ZSt22__move_median_to_firstIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_NS0_5__ops15_Iter_comp_iterIPFbS2_S2_vT_SD_SD_SD_T0_@Base
 1.0.0+dfsg
+ 
(optional)_ZSt22__move_median_to_firstIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_NS0_5__ops15_Iter_comp_iterIPFbS2_S2_vT_SD_SD_SD_T0_@Base
 1.0.0+dfsg
  
_ZSt25__unguarded_linear_insertIN9__gnu_cxx17__normal_iteratorIP15FastaIndexEntrySt6vectorIS2_SaIS2_NS0_5__ops14_Val_comp_iterIPFbS2_S2_vT_T0_@Base
 0.0+git20160702.bbc645f
  _ZlsRSoR10FastaIndex@Base 0.0+git20160702.bbc645f
  _ZlsRSoRK15FastaIndexEntry@Base 0.0+git20160702.bbc645f



View it on GitLab: 
https://salsa.debian.org/med-team/libfastahack/-/compare/8d5553d9f2c7419e2ae7389cd4b36ee26300f34d...c2233eb267a687e8d7a858046103fb

[med-svn] [Git][med-team/libfastahack] Pushed new tag debian/1.0.0+dfsg-7

2020-12-10 Thread Andreas Tille


Andreas Tille pushed new tag debian/1.0.0+dfsg-7 at Debian Med / libfastahack

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[med-svn] [Git][med-team/imagej] Pushed new tag debian/1.53g-1

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed new tag debian/1.53g-1 at Debian Med / imagej

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[med-svn] [Git][med-team/imagej][pristine-tar] pristine-tar data for imagej_1.53g.orig.tar.xz

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed to branch pristine-tar at Debian Med / imagej


Commits:
f80f3f73 by Nilesh Patra at 2020-12-10T16:49:52+05:30
pristine-tar data for imagej_1.53g.orig.tar.xz

- - - - -


2 changed files:

- + imagej_1.53g.orig.tar.xz.delta
- + imagej_1.53g.orig.tar.xz.id


Changes:

=
imagej_1.53g.orig.tar.xz.delta
=
Binary files /dev/null and b/imagej_1.53g.orig.tar.xz.delta differ


=
imagej_1.53g.orig.tar.xz.id
=
@@ -0,0 +1 @@
+1bb2526a374d0eac649c6c39a3521abaf16d



View it on GitLab: 
https://salsa.debian.org/med-team/imagej/-/commit/f80f3f7360baee32d9f417aa64517c23afd79bcf

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[med-svn] [Git][med-team/imagej][upstream] New upstream version 1.53g

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed to branch upstream at Debian Med / imagej


Commits:
78ec56ed by Nilesh Patra at 2020-12-10T16:49:48+05:30
New upstream version 1.53g
- - - - -


30 changed files:

- IJ_Props.txt
- ij/CompositeImage.java
- ij/Executer.java
- ij/IJ.java
- ij/ImageJ.java
- ij/ImagePlus.java
- ij/ImageStack.java
- ij/Menus.java
- ij/gui/GenericDialog.java
- + ij/gui/HistogramPlot.java
- ij/gui/HistogramWindow.java
- ij/gui/ImageCanvas.java
- ij/gui/ImageWindow.java
- ij/gui/NewImage.java
- ij/gui/RoiProperties.java
- ij/gui/Toolbar.java
- ij/io/DirectoryChooser.java
- ij/io/Opener.java
- ij/io/RoiDecoder.java
- ij/macro/FunctionFinder.java
- ij/macro/Functions.java
- ij/plugin/Duplicator.java
- ij/plugin/Histogram.java
- ij/plugin/HyperStackReducer.java
- ij/plugin/ImageCalculator.java
- ij/plugin/LutLoader.java
- ij/plugin/NewPlugin.java
- ij/plugin/OverlayCommands.java
- ij/plugin/Scaler.java
- ij/plugin/SimpleCommands.java


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/imagej/-/commit/78ec56ed1e9c99c7f27db933836b06a2dbaf6b87

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[med-svn] [Git][med-team/imagej] Pushed new tag upstream/1.53g

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed new tag upstream/1.53g at Debian Med / imagej

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[med-svn] [Git][med-team/imagej][master] 5 commits: routine-update: New upstream version

2020-12-10 Thread Nilesh Patra


Nilesh Patra pushed to branch master at Debian Med / imagej


Commits:
8e998b10 by Nilesh Patra at 2020-12-10T16:49:47+05:30
routine-update: New upstream version

- - - - -
78ec56ed by Nilesh Patra at 2020-12-10T16:49:48+05:30
New upstream version 1.53g
- - - - -
bd014128 by Nilesh Patra at 2020-12-10T16:49:53+05:30
Update upstream source from tag 'upstream/1.53g'

Update to upstream version '1.53g'
with Debian dir ef6768f87d612baadfb7749dc8cd9a360d470cee
- - - - -
65a6b091 by Nilesh Patra at 2020-12-10T16:49:53+05:30
routine-update: Standards-Version: 4.5.1

- - - - -
04da3af0 by Nilesh Patra at 2020-12-10T16:50:11+05:30
routine-update: Ready to upload to unstable

- - - - -


30 changed files:

- IJ_Props.txt
- debian/changelog
- debian/control
- ij/CompositeImage.java
- ij/Executer.java
- ij/IJ.java
- ij/ImageJ.java
- ij/ImagePlus.java
- ij/ImageStack.java
- ij/Menus.java
- ij/gui/GenericDialog.java
- + ij/gui/HistogramPlot.java
- ij/gui/HistogramWindow.java
- ij/gui/ImageCanvas.java
- ij/gui/ImageWindow.java
- ij/gui/NewImage.java
- ij/gui/RoiProperties.java
- ij/gui/Toolbar.java
- ij/io/DirectoryChooser.java
- ij/io/Opener.java
- ij/io/RoiDecoder.java
- ij/macro/FunctionFinder.java
- ij/macro/Functions.java
- ij/plugin/Duplicator.java
- ij/plugin/Histogram.java
- ij/plugin/HyperStackReducer.java
- ij/plugin/ImageCalculator.java
- ij/plugin/LutLoader.java
- ij/plugin/NewPlugin.java
- ij/plugin/OverlayCommands.java


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/imagej/-/compare/80202231cefae603f4eda48012f57eb38df21099...04da3af0bd1bae24dcd5be968516c30d501d40be

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[med-svn] [Git][med-team/orthanc-gdcm] Pushed new tag debian/1.1-3

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed new tag debian/1.1-3 at Debian Med / orthanc-gdcm

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[med-svn] [Git][med-team/orthanc-gdcm][master] 3 commits: building 1.1-3

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed to branch master at Debian Med / orthanc-gdcm


Commits:
344780fe by jodogne-guest at 2020-12-10T09:54:29+01:00
building 1.1-3

- - - - -
56eb8b67 by jodogne-guest at 2020-12-10T10:06:58+01:00
Upload to unstable

- - - - -
76e659fe by jodogne-guest at 2020-12-10T10:12:14+01:00
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/logging
- + debian/patches/series


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+orthanc-gdcm (1.1-4) unstable; urgency=medium
+
+  * Fix missing include because of upgraded liborthancframework-dev
+
+ -- Sebastien Jodogne   Thu, 10 Dec 2020 09:52:48 +0100
+
 orthanc-gdcm (1.1-2) unstable; urgency=medium
 
   * Source upload


=
debian/control
=
@@ -10,7 +10,7 @@ Build-Depends: cmake,
orthanc-dev (>= 1.7.0),
unzip,
uuid-dev
-Standards-Version: 4.5.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/orthanc-gdcm
 Vcs-Git: https://salsa.debian.org/med-team/orthanc-gdcm.git
 Homepage: https://www.orthanc-server.com/


=
debian/patches/logging
=
@@ -0,0 +1,17 @@
+Description: Add missing includes because of the new version of 
liborthancframework-dev
+Author: Sebastien Jodogne 
+Forwarded: yes
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+Index: OrthancGdcm-1.1/Plugin/Plugin.cpp
+===
+--- OrthancGdcm-1.1.orig/Plugin/Plugin.cpp
 OrthancGdcm-1.1/Plugin/Plugin.cpp
+@@ -23,6 +23,7 @@
+ 
+ #include 
+ #include 
++#include 
+ #include 
+ #include 
+ 


=
debian/patches/series
=
@@ -0,0 +1 @@
+logging



View it on GitLab: 
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[med-svn] [Git][med-team/orthanc-gdcm] Pushed new tag debian/1.1-4

2020-12-10 Thread Sebastien Jodogne


Sebastien Jodogne pushed new tag debian/1.1-4 at Debian Med / orthanc-gdcm

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[med-svn] [Git][med-team/bwa] Pushed new branch debian/experimental

2020-12-10 Thread Michael R. Crusoe


Michael R. Crusoe pushed new branch debian/experimental at Debian Med / bwa

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[med-svn] [Git][med-team/bwa] Pushed new tag debian/0.7.17-6_0exp0simde

2020-12-10 Thread Michael R. Crusoe


Michael R. Crusoe pushed new tag debian/0.7.17-6_0exp0simde at Debian Med / bwa

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[med-svn] [Git][med-team/bowtie2] Pushed new branch debian/experimental

2020-12-10 Thread Michael R. Crusoe


Michael R. Crusoe pushed new branch debian/experimental at Debian Med / bowtie2

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[med-svn] [Git][med-team/bowtie2] Pushed new tag debian/2.4.2-2_0exp0simde

2020-12-10 Thread Michael R. Crusoe


Michael R. Crusoe pushed new tag debian/2.4.2-2_0exp0simde at Debian Med / 
bowtie2

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[med-svn] [Git][med-team/libcereal] Pushed new tag upstream/1.3.0+dfsg

2020-12-10 Thread Andreas Tille


Andreas Tille pushed new tag upstream/1.3.0+dfsg at Debian Med / libcereal

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[med-svn] [Git][med-team/libcereal][upstream] New upstream version 1.3.0+dfsg

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch upstream at Debian Med / libcereal


Commits:
7ca3dc94 by Andreas Tille at 2020-12-10T08:39:58+01:00
New upstream version 1.3.0+dfsg
- - - - -


17 changed files:

- − include/cereal/external/rapidjson/allocators.h
- − include/cereal/external/rapidjson/cursorstreamwrapper.h
- − include/cereal/external/rapidjson/document.h
- − include/cereal/external/rapidjson/encodedstream.h
- − include/cereal/external/rapidjson/encodings.h
- − include/cereal/external/rapidjson/error/en.h
- − include/cereal/external/rapidjson/error/error.h
- − include/cereal/external/rapidjson/filereadstream.h
- − include/cereal/external/rapidjson/filewritestream.h
- − include/cereal/external/rapidjson/fwd.h
- − include/cereal/external/rapidjson/internal/biginteger.h
- − include/cereal/external/rapidjson/internal/diyfp.h
- − include/cereal/external/rapidjson/internal/dtoa.h
- − include/cereal/external/rapidjson/internal/ieee754.h
- − include/cereal/external/rapidjson/internal/itoa.h
- − include/cereal/external/rapidjson/internal/meta.h
- − include/cereal/external/rapidjson/internal/pow10.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/libcereal/-/commit/7ca3dc9405f7df30ad1a1058aac576ade9593698

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[med-svn] [Git][med-team/libcereal][master] 5 commits: Remove code copy of rapidjson and use Debian packaged code instead

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / libcereal


Commits:
5323266f by Andreas Tille at 2020-12-10T08:39:41+01:00
Remove code copy of rapidjson and use Debian packaged code instead

- - - - -
7ca3dc94 by Andreas Tille at 2020-12-10T08:39:58+01:00
New upstream version 1.3.0+dfsg
- - - - -
a0d5c52c by Andreas Tille at 2020-12-10T08:39:59+01:00
Update upstream source from tag 'upstream/1.3.0+dfsg'

Update to upstream version '1.3.0+dfsg'
with Debian dir 5eab7f41385b9ca4f539382122b2c21f47ad8ec6
- - - - -
e418b043 by Andreas Tille at 2020-12-10T08:47:13+01:00
Include Debian packaged rapidjson

- - - - -
25c8f586 by Andreas Tille at 2020-12-10T09:23:13+01:00
Enable real usage of Debian packaged rapidjson

- - - - -


23 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/patches/series
- + debian/patches/use_debian_packaged_rapidjson.patch
- debian/watch
- − include/cereal/external/rapidjson/allocators.h
- − include/cereal/external/rapidjson/cursorstreamwrapper.h
- − include/cereal/external/rapidjson/document.h
- − include/cereal/external/rapidjson/encodedstream.h
- − include/cereal/external/rapidjson/encodings.h
- − include/cereal/external/rapidjson/error/en.h
- − include/cereal/external/rapidjson/error/error.h
- − include/cereal/external/rapidjson/filereadstream.h
- − include/cereal/external/rapidjson/filewritestream.h
- − include/cereal/external/rapidjson/fwd.h
- − include/cereal/external/rapidjson/internal/biginteger.h
- − include/cereal/external/rapidjson/internal/diyfp.h
- − include/cereal/external/rapidjson/internal/dtoa.h
- − include/cereal/external/rapidjson/internal/ieee754.h
- − include/cereal/external/rapidjson/internal/itoa.h
- − include/cereal/external/rapidjson/internal/meta.h
- − include/cereal/external/rapidjson/internal/pow10.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/libcereal/-/compare/61d38e3fe047fc564ad63aba420bf7aed9cb1747...25c8f5862b283352754d62b407e58942d7b578dc

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[med-svn] [Git][med-team/libcereal][pristine-tar] pristine-tar data for libcereal_1.3.0+dfsg.orig.tar.xz

2020-12-10 Thread Andreas Tille


Andreas Tille pushed to branch pristine-tar at Debian Med / libcereal


Commits:
3da5047c by Andreas Tille at 2020-12-10T08:39:59+01:00
pristine-tar data for libcereal_1.3.0+dfsg.orig.tar.xz

- - - - -


2 changed files:

- + libcereal_1.3.0+dfsg.orig.tar.xz.delta
- + libcereal_1.3.0+dfsg.orig.tar.xz.id


Changes:

=
libcereal_1.3.0+dfsg.orig.tar.xz.delta
=
Binary files /dev/null and b/libcereal_1.3.0+dfsg.orig.tar.xz.delta differ


=
libcereal_1.3.0+dfsg.orig.tar.xz.id
=
@@ -0,0 +1 @@
+49dbcf4274c05b06622abb2c6e5b012b34ee2d62



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https://salsa.debian.org/med-team/libcereal/-/commit/3da5047c27a66e072f5699f31a6803c5269de67d

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