[med-svn] [Git][med-team/community/helper-scripts][master] automatic update
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: f78fc2d7 by Andreas Tille at 2021-03-29T01:42:23+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: = debian-med-tests.txt = @@ -1,4 +1,4 @@ -Last-Update: Sun, 28 Mar 2021 13:42:03 + +Last-Update: Mon, 29 Mar 2021 01:42:03 + Source| Vote | Tasks | Tags ---++-+-- = outdated_med-packages.txt = The diff for this file was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f78fc2d73706a7d5538816bf223ccb46a2a30a1d -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f78fc2d73706a7d5538816bf223ccb46a2a30a1d You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/python-pangolearn][master] d/u/metadata - registry
Steffen Möller pushed to branch master at Debian Med / python-pangolearn Commits: 3bc14609 by Steffen Möller at 2021-03-28T14:25:11+00:00 d/u/metadata - registry - - - - - 1 changed file: - + debian/upstream/metadata Changes: = debian/upstream/metadata = @@ -0,0 +1,9 @@ +Registry: + - Name: guix + Entry: NA + Checked: 2021-03-28 + - Name: conda:bioconda + Entry: pangolearn + - Name: bio.tools + Entry: NA + Checked: 2021-03-28 View it on GitLab: https://salsa.debian.org/med-team/python-pangolearn/-/commit/3bc146098bf3575d931b135524ca7ca57f8f3660 -- View it on GitLab: https://salsa.debian.org/med-team/python-pangolearn/-/commit/3bc146098bf3575d931b135524ca7ca57f8f3660 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/python-pangolearn][master] Update control - found mafft mentioned in a description
Steffen Möller pushed to branch master at Debian Med / python-pangolearn
Commits:
f1af633d by Steffen Möller at 2021-03-28T14:19:22+00:00
Update control - found mafft mentioned in a description
- - - - -
1 changed file:
- debian/control
Changes:
=
debian/control
=
@@ -17,6 +17,7 @@ Package: python3-pangolearn
Architecture: all
Section: python
Depends: ${python3:Depends}, ${misc:Depends}
+Suggests: mafft
Description: store of the trained model for pangolin to access
Pangolin runs a multinomial logistic regression model trained against
lineage assignments based on GISAID data.
View it on GitLab:
https://salsa.debian.org/med-team/python-pangolearn/-/commit/f1af633d7ff1f1c5b135cc5ce3bf1b25cd174f2b
--
View it on GitLab:
https://salsa.debian.org/med-team/python-pangolearn/-/commit/f1af633d7ff1f1c5b135cc5ce3bf1b25cd174f2b
You're receiving this email because of your account on salsa.debian.org.
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[med-svn] [Git][med-team/community/helper-scripts][master] automatic update
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
de5d4a7e by Andreas Tille at 2021-03-28T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=
debian-med-tests.txt
=
@@ -1,55 +1,56 @@
-Last-Update: Sun, 28 Mar 2021 01:42:03 +
+Last-Update: Sun, 28 Mar 2021 13:42:03 +
Source| Vote | Tasks
| Tags
---++-+--
- dcmtk |205 | {imaging,covid-19}
|
+ dcmtk |207 | {imaging,covid-19}
|
orthanc | 97 | {covid-19,practice,imaging}
|
orthanc-wsi | 49 |
{his,oncology,covid-19,imaging,practice,laboratory} |
- gdcm | 36 | {imaging-dev}
|
- amide | 34 | {imaging}
|
- dicom3tools | 32 | {imaging}
|
- dicomscope| 29 | {imaging}
|
- openslide | 29 | {imaging}
|
- gdcm | 20 | {imaging,covid-19}
|
- htsjdk| 20 | {bio-dev}
|
- odin | 19 | {imaging,imaging-dev}
|
- nifticlib | 18 | {imaging}
|
+ gdcm | 38 | {imaging-dev}
|
+ amide | 35 | {imaging}
|
+ dicom3tools | 31 | {imaging}
|
+ dicomscope| 28 | {imaging}
|
+ openslide | 28 | {imaging}
|
+ htsjdk| 21 | {bio-dev}
|
+ odin | 20 | {imaging,imaging-dev}
|
+ gdcm | 18 | {imaging,covid-19}
|
dcm2niix | 17 | {imaging}
|
- gnumed-server | 17 | {covid-19,practice}
|
+ nifticlib | 17 | {imaging}
|
dicomnifti| 16 | {imaging}
|
- invesalius| 16 | {imaging}
|
+ gnumed-server | 16 | {covid-19,practice}
|
gdcm | 15 | {imaging-dev}
|
+ invesalius| 15 | {imaging}
|
minc-tools| 14 | {imaging}
|
pixelmed | 14 | {imaging}
|
vtk-dicom | 14 | {imaging}
|
insighttoolkit4 | 12 | {imaging-dev}
|
- adun.app | 11 | {bio}
|
- nifti2dicom | 11 | {imaging}
|
- plastimatch | 11 | {imaging}
|
+ adun.app | 10 | {bio}
|
mia | 10 | {imaging}
|
ngs-sdk | 10 | {bio-dev}
|
nifti2dicom | 10 | {imaging}
|
orthanc-webviewer | 10 | {imaging}
|
+ plastimatch | 10 | {imaging}
|
+ nifti2dicom |
[med-svn] [Git][med-team/snpeff][master] Updating d/watch for Github new release/tag page
Pierre Gruet pushed to branch master at Debian Med / snpeff Commits: eefb6404 by Pierre Gruet at 2021-03-28T14:20:39+02:00 Updating d/watch for Github new release/tag page - - - - - 1 changed file: - debian/watch Changes: = debian/watch = @@ -1,4 +1,4 @@ version=4 opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg[0-9]*//g,repack,compression=xz" \ - https://github.com/pcingola/SnpEff/releases .*/archive/v(\d.+)\.(?:tar(?:\.gz|\.bz2)?|tgz) + https://github.com/pcingola/SnpEff/releases (?:.*?/)?v?(\d[\da-z.]*)\.(?:tar(?:\.gz|\.bz2)?|tgz) View it on GitLab: https://salsa.debian.org/med-team/snpeff/-/commit/eefb6404c41129e420097e9210b839556a9a093d -- View it on GitLab: https://salsa.debian.org/med-team/snpeff/-/commit/eefb6404c41129e420097e9210b839556a9a093d You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
