[med-svn] [Git][med-team/libsis-jhdf5-java][master] Depend on libeclipse-jdt-core-java instead of libecj-java
Emmanuel Bourg pushed to branch master at Debian Med / libsis-jhdf5-java
Commits:
b80398f6 by Emmanuel Bourg at 2023-02-23T13:25:21+01:00
Depend on libeclipse-jdt-core-java instead of libecj-java
- - - - -
3 changed files:
- debian/changelog
- debian/control
- debian/patches/use_debian_packaged_libs.patch
Changes:
=
debian/changelog
=
@@ -1,3 +1,10 @@
+libsis-jhdf5-java (19.04.1+dfsg-3) unstable; urgency=medium
+
+ * Team upload.
+ * Depend on libeclipse-jdt-core-java instead of libecj-java
+
+ -- Emmanuel Bourg Thu, 23 Feb 2023 13:25:11 +0100
+
libsis-jhdf5-java (19.04.1+dfsg-2) unstable; urgency=medium
* Adding a missing directive from removed H5private.h file of hdf5
=
debian/control
=
@@ -13,7 +13,8 @@ Build-Depends: debhelper-compat (= 13),
ant,
libcommons-lang3-java,
libcommons-io-java,
- libecj-java,
+ libeclipse-jdt-core-java,
+ libeclipse-jdt-compiler-apt-java,
libjaxb-java,
libsis-base-java,
libhdf5-dev,
=
debian/patches/use_debian_packaged_libs.patch
=
@@ -5,7 +5,7 @@ Forwarded: not-needed
--- a/.classpath
+++ b/.classpath
-@@ -4,18 +4,18 @@
+@@ -4,18 +4,19 @@
@@ -28,7 +28,8 @@ Forwarded: not-needed
+
+
+
-+
++
++
+
+
+
@@ -38,7 +39,7 @@ Forwarded: not-needed
--- a/build.gradle
+++ b/build.gradle
-@@ -3,8 +3,8 @@ apply from: 'javaproject.gradle'
+@@ -3,8 +3,8 @@
group='sis'
dependencies {
@@ -51,12 +52,13 @@ Forwarded: not-needed
tasks.withType(Test) {
--- a/javaproject.gradle
+++ b/javaproject.gradle
-@@ -180,7 +180,7 @@ test {
+@@ -180,7 +180,8 @@
}
dependencies {
-ecj files('../jhdf5/libs/build/ecj-4.6.1.jar')
-+ecj files('/usr/share/java/ecj.jar')
++ecj files('/usr/share/java/eclipse-jdt-core.jar')
++ecj files('/usr/share/java/eclipse-jdt-compiler-apt.jar')
}
compileJava {
View it on GitLab:
https://salsa.debian.org/med-team/libsis-jhdf5-java/-/commit/b80398f6ba353f9c535b9bba7894debf48f2580a
--
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[med-svn] [Git][med-team/libsis-jhdf5-java] Pushed new tag debian/19.04.1+dfsg-3
Emmanuel Bourg pushed new tag debian/19.04.1+dfsg-3 at Debian Med / libsis-jhdf5-java -- View it on GitLab: https://salsa.debian.org/med-team/libsis-jhdf5-java/-/tree/debian/19.04.1+dfsg-3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/diamond-aligner] Pushed new tag upstream/2.1.3
Michael R. Crusoe pushed new tag upstream/2.1.3 at Debian Med / diamond-aligner -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/tree/upstream/2.1.3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/diamond-aligner] Pushed new tag debian/2.1.3-1
Michael R. Crusoe pushed new tag debian/2.1.3-1 at Debian Med / diamond-aligner -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/tree/debian/2.1.3-1 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/diamond-aligner][master] 8 commits: routine-update: New upstream version
Michael R. Crusoe pushed to branch master at Debian Med / diamond-aligner Commits: b09c2300 by Michael R. Crusoe at 2023-02-20T14:07:02+01:00 routine-update: New upstream version - - - - - 7407ab11 by Michael R. Crusoe at 2023-02-20T14:07:03+01:00 New upstream version 2.1.2 - - - - - d7ea31fa by Michael R. Crusoe at 2023-02-20T14:07:08+01:00 Update upstream source from tag 'upstream/2.1.2' Update to upstream version '2.1.2' with Debian dir a47d5d085872511a935eb7dae447fcdb03eff811 - - - - - b7d263f0 by Michael R. Crusoe at 2023-02-20T14:07:27+01:00 routine-update: Ready to upload to unstable - - - - - 628b5e8a by Michael R. Crusoe at 2023-02-23T17:30:48+01:00 routine-update: New upstream version - - - - - 065126df by Michael R. Crusoe at 2023-02-23T17:30:50+01:00 New upstream version 2.1.3 - - - - - 8c563cfb by Michael R. Crusoe at 2023-02-23T17:30:53+01:00 Update upstream source from tag 'upstream/2.1.3' Update to upstream version '2.1.3' with Debian dir 56ab10cf4d074ba833f128be6a7e3637ce988b91 - - - - - 4f42257f by Michael R. Crusoe at 2023-02-23T18:47:39+01:00 routine-update: Ready to upload to unstable - - - - - 30 changed files: - + .cirrus.yml - .github/workflows/cmake.yml - .travis.yml - CMakeLists.txt - + azure-pipelines.yml - debian/changelog - src/ChangeLog - src/align/align.cpp - src/align/align.h - src/align/culling.cpp - src/align/extend.cpp - src/align/gapped_final.cpp - src/align/gapped_score.cpp - src/align/global_ranking/global_ranking.cpp - src/align/legacy/banded_swipe_pipeline.cpp - + src/align/legacy/pipeline.h - src/align/load_hits.h - src/basic/basic.cpp - src/basic/config.cpp - src/basic/config.h - src/basic/const.h - src/basic/match.h - src/cluster/cascaded/cascaded.cpp - src/cluster/cascaded/cascaded.h - src/cluster/cascaded/helpers.cpp - src/cluster/cascaded/recluster.cpp - src/cluster/cascaded/wrapper.cpp - src/cluster/helpers.cpp - src/cluster/output.cpp - src/cluster/realign.cpp The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c39c9c29d29de2449048284b276e4d425a0c8c21...4f42257f53d6490da5d2ecc2447244be6b649dd6 -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c39c9c29d29de2449048284b276e4d425a0c8c21...4f42257f53d6490da5d2ecc2447244be6b649dd6 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/diamond-aligner][upstream] 2 commits: New upstream version 2.1.2
Michael R. Crusoe pushed to branch upstream at Debian Med / diamond-aligner Commits: 7407ab11 by Michael R. Crusoe at 2023-02-20T14:07:03+01:00 New upstream version 2.1.2 - - - - - 065126df by Michael R. Crusoe at 2023-02-23T17:30:50+01:00 New upstream version 2.1.3 - - - - - 30 changed files: - + .cirrus.yml - .github/workflows/cmake.yml - .travis.yml - CMakeLists.txt - + azure-pipelines.yml - src/ChangeLog - src/align/align.cpp - src/align/align.h - src/align/culling.cpp - src/align/extend.cpp - src/align/gapped_final.cpp - src/align/gapped_score.cpp - src/align/global_ranking/global_ranking.cpp - src/align/legacy/banded_swipe_pipeline.cpp - + src/align/legacy/pipeline.h - src/align/load_hits.h - src/basic/basic.cpp - src/basic/config.cpp - src/basic/config.h - src/basic/const.h - src/basic/match.h - src/cluster/cascaded/cascaded.cpp - src/cluster/cascaded/cascaded.h - src/cluster/cascaded/helpers.cpp - src/cluster/cascaded/recluster.cpp - src/cluster/cascaded/wrapper.cpp - src/cluster/helpers.cpp - src/cluster/output.cpp - src/cluster/realign.cpp - src/cluster/reassign.cpp The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/04189ed45ed7a508d629d106a74328774ecc398d...065126df252d16dc506e92f55f51b80a6dbf0303 -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/04189ed45ed7a508d629d106a74328774ecc398d...065126df252d16dc506e92f55f51b80a6dbf0303 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/diamond-aligner][pristine-tar] 2 commits: pristine-tar data for diamond-aligner_2.1.2.orig.tar.xz
Michael R. Crusoe pushed to branch pristine-tar at Debian Med / diamond-aligner Commits: e53c266c by Michael R. Crusoe at 2023-02-20T14:07:08+01:00 pristine-tar data for diamond-aligner_2.1.2.orig.tar.xz - - - - - adf8457c by Michael R. Crusoe at 2023-02-23T17:30:53+01:00 pristine-tar data for diamond-aligner_2.1.3.orig.tar.xz - - - - - 4 changed files: - + diamond-aligner_2.1.2.orig.tar.xz.delta - + diamond-aligner_2.1.2.orig.tar.xz.id - + diamond-aligner_2.1.3.orig.tar.xz.delta - + diamond-aligner_2.1.3.orig.tar.xz.id Changes: = diamond-aligner_2.1.2.orig.tar.xz.delta = Binary files /dev/null and b/diamond-aligner_2.1.2.orig.tar.xz.delta differ = diamond-aligner_2.1.2.orig.tar.xz.id = @@ -0,0 +1 @@ +e2fa2772fb90a8aa21ca96f622c83ca5f0d6d504 = diamond-aligner_2.1.3.orig.tar.xz.delta = Binary files /dev/null and b/diamond-aligner_2.1.3.orig.tar.xz.delta differ = diamond-aligner_2.1.3.orig.tar.xz.id = @@ -0,0 +1 @@ +92b70f6efee3ec5ee1a87c23f2ff971f0e0608b8 View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/dd5ad44b2a13e23a53cb9f8fbafc2032eaa1cf84...adf8457cf1c08994b5a392addbf9fa9812fde981 -- View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/dd5ad44b2a13e23a53cb9f8fbafc2032eaa1cf84...adf8457cf1c08994b5a392addbf9fa9812fde981 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
[med-svn] [Git][med-team/community/helper-scripts][master] automatic update
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: e392d16d by Andreas Tille at 2023-02-24T01:42:31+00:00 automatic update - - - - - 4 changed files: - debian-med-tests.txt - debian-science-tests.txt - outdated_med-packages.txt - python-team-tests.txt Changes: = debian-med-tests.txt = @@ -1,4 +1,4 @@ -Last-Update: Thu, 23 Feb 2023 13:42:04 + +Last-Update: Fri, 24 Feb 2023 01:42:04 + Source| Vote | Tasks | Tags ---++-+-- = debian-science-tests.txt = @@ -1,4 +1,4 @@ -Last-Update: Thu, 23 Feb 2023 13:42:06 + +Last-Update: Fri, 24 Feb 2023 01:42:04 + Source | Vote | Tasks |Tags -+++ = outdated_med-packages.txt = The diff for this file was not included because it is too large. = python-team-tests.txt = @@ -1,4 +1,4 @@ -Last-Update: Thu, 23 Feb 2023 13:42:07 + +Last-Update: Fri, 24 Feb 2023 01:42:05 + Source | Vote | Tags --++ View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e392d16df1d999ee3451dbdaf90adefe945ca4ac -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e392d16df1d999ee3451dbdaf90adefe945ca4ac You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
