Michael R. Crusoe pushed to branch master at Debian Med / q2-emperor
Commits:
2f5ec64b by Michael R. Crusoe at 2024-06-25T03:34:49+02:00
New upstream version 2024.5.0
- - - - -
cf368eba by Michael R. Crusoe at 2024-06-25T03:34:49+02:00
routine-update: New upstream version
- - - - -
9e8194eb by Michael R. Crusoe at 2024-06-25T03:34:50+02:00
Update upstream source from tag 'upstream/2024.5.0'
Update to upstream version '2024.5.0'
with Debian dir 0ec1e55fb68c65f0e256ef0c18ff0d26740fd35a
- - - - -
a89da1e2 by Michael R. Crusoe at 2024-06-25T03:35:07+02:00
routine-update: Regenerate debian/control from debian/control.in
- - - - -
61bc5ff7 by Michael R. Crusoe at 2024-06-25T03:38:20+02:00
d/patches/configparser.patch: copy from qiime packaging
- - - - -
52ba609f by Michael R. Crusoe at 2024-06-25T03:38:20+02:00
routine-update: Ready to upload to unstable
- - - - -
5 changed files:
- debian/changelog
- debian/control
- + debian/patches/configparser.patch
- debian/patches/series
- q2_emperor/_version.py
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+q2-emperor (2024.5.0-1) unstable; urgency=medium
+
+ * Team upload.
+ * New upstream version
+ * Regenerate debian/control from debian/control.in (routine-update)
+ * d/patches/configparser.patch: copy from qiime packaging
+
+ -- Michael R. Crusoe <cru...@debian.org> Tue, 25 Jun 2024 03:35:08 +0200
+
q2-emperor (2024.2.0-2) unstable; urgency=medium
* Team upload.
=====================================
debian/control
=====================================
@@ -12,9 +12,9 @@ Build-Depends: debhelper-compat (= 13),
python3-pytest <!nocheck>,
python3-pytest-cov <!nocheck>,
python3-emperor <!nocheck>,
- qiime (>= 2024.2) <!nocheck>,
- q2templates (>= 2024.2) <!nocheck>,
- q2-types (>= 2024.2) <!nocheck>
+ qiime (>= 2024.5) <!nocheck>,
+ q2templates (>= 2024.5) <!nocheck>,
+ q2-types (>= 2024.5) <!nocheck>
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/q2-emperor
Vcs-Git: https://salsa.debian.org/med-team/q2-emperor.git
@@ -29,9 +29,9 @@ Depends: ${shlibs:Depends},
python3-pandas,
python3-emperor,
python3-distutils,
- q2templates (>= 2024.2),
- q2-types (>= 2024.2),
- qiime (>= 2024.2)
+ q2templates (>= 2024.5),
+ q2-types (>= 2024.5),
+ qiime (>= 2024.5)
Description: QIIME2 plugin for display of ordination plots
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
=====================================
debian/patches/configparser.patch
=====================================
@@ -0,0 +1,35 @@
+From: Athos Ribeiro <athos.ribe...@canonical.com>
+Date: Mon, 3 Jun 2024 11:31:54 -0300
+Subject: [PATCH] Use ConfigParser instead of SafeConfigParser
+
+The configparser's SafeConfigParser has been renamed to ConfigParser in
+Python 3.2 [1]. It was finally removed in Python 3.12 [2].
+
+[1] https://docs.python.org/dev/whatsnew/3.2.html#configparser
+[2] https://docs.python.org/3/whatsnew/3.12.html#configparser
+
+Last-Update: 2024-06-03
+Forwarded: not-needed, see
https://github.com/qiime2/q2-sample-classifier/pull/229
+---
+ versioneer.py | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/versioneer.py b/versioneer.py
+index a5e7a20..886455f 100644
+--- a/versioneer.py
++++ b/versioneer.py
+@@ -340,9 +340,9 @@ def get_config_from_root(root):
+ # configparser.NoOptionError (if it lacks "VCS="). See the docstring at
+ # the top of versioneer.py for instructions on writing your setup.cfg .
+ setup_cfg = os.path.join(root, "setup.cfg")
+- parser = configparser.SafeConfigParser()
++ parser = configparser.ConfigParser()
+ with open(setup_cfg, "r") as f:
+- parser.readfp(f)
++ parser.read_file(f)
+ VCS = parser.get("versioneer", "VCS") # mandatory
+
+ def get(parser, name):
+--
+2.43.0
+
=====================================
debian/patches/series
=====================================
@@ -1 +1,2 @@
+configparser.patch
skip-test-needing-internet.patch
=====================================
q2_emperor/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
- git_refnames = " (tag: 2024.2.0, Release-2024.2)"
- git_full = "8c5ab8122280eaafcb8b313deebcb81551b96119"
- git_date = "2024-02-16 21:57:08 +0000"
+ git_refnames = " (tag: 2024.5.0, Release-2024.5)"
+ git_full = "1b293301d45f3df156f88e00d66f2b2cef5554f6"
+ git_date = "2024-05-29 04:15:14 +0000"
keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
return keywords
View it on GitLab:
https://salsa.debian.org/med-team/q2-emperor/-/compare/68292be658d5499111c784f43f531ab4af2c651f...52ba609f61b09a4b7436918a93f5aab85f5e53a1
--
This project does not include diff previews in email notifications.
View it on GitLab:
https://salsa.debian.org/med-team/q2-emperor/-/compare/68292be658d5499111c784f43f531ab4af2c651f...52ba609f61b09a4b7436918a93f5aab85f5e53a1
You're receiving this email because of your account on salsa.debian.org.
_______________________________________________
debian-med-commit mailing list
debian-med-com...@alioth-lists.debian.net
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
