[med-svn] [SCM] beeswarm annotated tag, upstream/0.0.7, created. upstream/0.0.7
The annotated tag, upstream/0.0.7 has been created at 11d9819a6421fbb491915357ff37d801a67192af (tag) tagging 2a71ecb46b86654590dee592456ade08f5328ee6 (commit) tagged by Charles Plessy on Mon Apr 11 15:35:05 2011 +0900 - Shortlog Upstream version 0.0.7 Charles Plessy (1): Imported Upstream version 0.0.7 --- -- The bee swarm plot, an alternative to stripchart. ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] [SCM] beeswarm branch, master, created. a1a0410ed4622ef89dc9e7834242cc3151ec00fb
The branch, master has been created at a1a0410ed4622ef89dc9e7834242cc3151ec00fb (commit) - Shortlog commit a1a0410ed4622ef89dc9e7834242cc3151ec00fb Author: Charles Plessy ple...@debian.org Date: Mon Apr 11 15:56:53 2011 +0900 Draft package based on similar packaged CRAN libraries. commit 2a71ecb46b86654590dee592456ade08f5328ee6 Author: Charles Plessy ple...@debian.org Date: Mon Apr 11 15:35:05 2011 +0900 Imported Upstream version 0.0.7 --- -- The bee swarm plot, an alternative to stripchart. ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] [SCM] fastx-toolkit branch, master, updated. upstream/0.0.13-4-g660b8d4
The following commit has been merged in the master branch: commit 0d225fc6ee22765db7db834c60d142df78501fbd Author: Charles Plessy ple...@debian.org Date: Mon Apr 11 17:46:01 2011 +0900 Copyright check in progress. diff --git a/debian/copyright b/debian/copyright index 9bbf8b8..18dd153 100644 --- a/debian/copyright +++ b/debian/copyright @@ -1,8 +1,6 @@ -Format: DEP5 +Format: http://dep.debian.net/deps/dep5/ Source: http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit-0.0.13.tar.bz2 -Copyright: 2008–2009, Assaf Gordon gor...@cshl.edu -License: AGPL-3 - FASTX-Toolkit LICENSE +Comment: FASTX-Toolkit LICENSE = . FASTX-Toolkit is distributed under the Affero GPL (AGPL) version 3 or later. @@ -14,38 +12,62 @@ License: AGPL-3 Galaxy itself (which is a more permissive, MIT style license). See the GALAXY-LICENSE file. +Files: * +Copyright: 2008–2009, Assaf Gordon gor...@cshl.edu +License: AGPL-3+ + +Files: galaxy/* + +Files: tools/fastx_toolkit/fastx_barcode_splitter_galaxy_wrapper.sh +License: AGPL-3+ + +Files: m4/ax_c_long_long.m4 +Comment: See http://www.nongnu.org/autoconf-archive/ax_c_long_long.html. +Copyright: © 2008 Caolan McNamara cao...@skynet.ie +License: GAP-nowarranty + +Files: m4/ax_cxx_header_stdcxx_tr1.m4 +Copyright: © 2008 Benjamin Kosnik b...@redhat.com +License: GAP-nowarranty + +License: GAP-nowarranty + Copying and distribution of this file, with or without modification, are + permitted in any medium without royalty provided the copyright notice + and this notice are preserved. This file is offered as-is, without any + warranty. + License: AGPL-3 GNU AFFERO GENERAL PUBLIC LICENSE Version 3, 19 November 2007 - + . Copyright (C) 2007 Free Software Foundation, Inc. http://fsf.org/ Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed. - + . Preamble - + . The GNU Affero General Public License is a free, copyleft license for software and other kinds of works, specifically designed to ensure cooperation with the community in the case of network server software. - + . The licenses for most software and other practical works are designed to take away your freedom to share and change the works. By contrast, our General Public Licenses are intended to guarantee your freedom to share and change all versions of a program--to make sure it remains free software for all its users. - + . When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to make sure that you have the freedom to distribute copies of free software (and charge for them if you wish), that you receive source code or can get it if you want it, that you can change the software or use pieces of it in new free programs, and that you know you can do these things. - + . Developers that use our General Public Licenses protect your rights with two steps: (1) assert copyright on the software, and (2) offer you this License which gives you legal permission to copy, distribute and/or modify the software. - + . A secondary benefit of defending all users' freedom is that improvements made in alternate versions of the program, if they receive widespread use, become available for other developers to @@ -55,7 +77,7 @@ License: AGPL-3 The GNU General Public License permits making a modified version and letting the public access it on a server without ever releasing its source code to the public. - + . The GNU Affero General Public License is designed specifically to ensure that, in such cases, the modified source code becomes available to the community. It requires the operator of a network server to @@ -63,48 +85,48 @@ License: AGPL-3 users of that server. Therefore, public use of a modified version, on a publicly accessible server, gives the public access to the source code of the modified version. - + . An older license, called the Affero General Public License and published by Affero, was designed to accomplish similar goals. This is a different license, not a version of the Affero GPL, but Affero has released a new version of the Affero GPL which permits relicensing under this license. - + . The precise terms and conditions for copying, distribution and modification follow. - + . TERMS AND CONDITIONS - + . 0. Definitions. - + . This License refers to version 3 of the GNU Affero General Public License. - + . Copyright also means copyright-like laws that apply to other kinds of works, such as semiconductor masks. - + . The Program refers to any copyrightable work licensed under this License. Each licensee is addressed as you. Licensees and recipients may be individuals or organizations. - + . To modify a work means to copy from or adapt all
[med-svn] [SCM] fastx-toolkit branch, master, updated. upstream/0.0.13-4-g660b8d4
The following commit has been merged in the master branch:
commit 660b8d4de4f2fa851ab3c3783da1b3f6de76db5f
Author: Charles Plessy ple...@debian.org
Date: Mon Apr 11 17:46:35 2011 +0900
Polished the long description.
diff --git a/debian/control b/debian/control
index e5387ee..247d911 100644
--- a/debian/control
+++ b/debian/control
@@ -2,6 +2,7 @@ Source: fastx-toolkit
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team
debian-med-packag...@lists.alioth.debian.org
+DM-Upload-Allowed: yes
Uploaders: Charles Plessy ple...@debian.org
Build-Depends: cdbs, debhelper (= 8), autotools-dev
Standards-Version: 3.9.1
@@ -12,14 +13,13 @@ Homepage: http://hannonlab.cshl.edu/fastx_toolkit/
Package: fastx-toolkit
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: FASTQ/A short-reads pre-processing tools
- The FASTX-Toolkit is a collection of command line tools for Short-Reads
- FASTA/FASTQ files preprocessing. Next-Generation sequencing machines usually
- produce FASTA or FASTQ files, containing multiple short-reads sequences
- (possibly with quality information). The main processing of such FASTA/FASTQ
- files is mapping (aka aligning) the sequences to reference genomes or other
- databases using specialized programs. Example of such mapping programs are:
- Blat, SHRiMP, LastZ, MAQ and many many others. However, It is sometimes more
- productive to preprocess the FASTA/FASTQ files before mapping the sequences to
- the genome - manipulating the sequences to produce better mapping results. The
- FASTX-Toolkit tools perform some of these preprocessing tasks.
+Description: FASTQ/A short nucleotide reads pre-processing tools
+ The FASTX-Toolkit is a collection of command line tools for preprocessing
+ short nucleotide reads in FASTA and FASTQ formats, usually produced by
+ Next-Generation sequencing machines. The main processing of such FASTA/FASTQ
+ files is mapping (aligning) the sequences to reference genomes or other
+ databases using specialized programs like BWA, Bowtie and many many others.
+ However, it is sometimes more productive to preprocess the FASTA/FASTQ files
+ before mapping the sequences to the genome—manipulating the sequences to
+ produce better mapping results. The FASTX-Toolkit tools perform some of these
+ preprocessing tasks.
--
FASTQ/A short-reads pre-processing tools
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[med-svn] r6520 - trunk/packages/gnumed-server/trunk/debian
Author: tille Date: 2011-04-11 11:09:16 + (Mon, 11 Apr 2011) New Revision: 6520 Modified: trunk/packages/gnumed-server/trunk/debian/changelog Log: New upstream version Modified: trunk/packages/gnumed-server/trunk/debian/changelog === --- trunk/packages/gnumed-server/trunk/debian/changelog 2011-04-10 21:05:35 UTC (rev 6519) +++ trunk/packages/gnumed-server/trunk/debian/changelog 2011-04-11 11:09:16 UTC (rev 6520) @@ -1,3 +1,9 @@ +gnumed-server (15.2-1) unstable; urgency=low + + * New upstream version + + -- Andreas Tille ti...@debian.org Mon, 11 Apr 2011 13:00:07 +0200 + gnumed-server (15.1-1) unstable; urgency=low * New upstream version ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] r6521 - trunk/packages/gnumed-server/tags
Author: tille Date: 2011-04-11 11:14:06 + (Mon, 11 Apr 2011) New Revision: 6521 Added: trunk/packages/gnumed-server/tags/15.2-1/ Removed: trunk/packages/gnumed-server/tags/14.4-1/ trunk/packages/gnumed-server/tags/14.6-1/ trunk/packages/gnumed-server/tags/14.7-1/ Log: Tagged 15.2-1 (and removed some historical tags, but leaving version in stable ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] r6522 - trunk/packages/gnumed-client/trunk/debian
Author: tille Date: 2011-04-11 11:57:59 + (Mon, 11 Apr 2011) New Revision: 6522 Modified: trunk/packages/gnumed-client/trunk/debian/changelog trunk/packages/gnumed-client/trunk/debian/control Log: New upstream version, bumped standards version Modified: trunk/packages/gnumed-client/trunk/debian/changelog === --- trunk/packages/gnumed-client/trunk/debian/changelog 2011-04-11 11:14:06 UTC (rev 6521) +++ trunk/packages/gnumed-client/trunk/debian/changelog 2011-04-11 11:57:59 UTC (rev 6522) @@ -1,7 +1,9 @@ -gnumed-client (0.9.1-2) UNRELEASED; urgency=low +gnumed-client (0.9.2-1) unstable; urgency=low + * New upstream version * debian/conf/gnumed-client.conf: enable default name for plugins + * Standards-Version: 3.9.2 (no changes needed) -- Andreas Tille ti...@debian.org Sat, 09 Apr 2011 19:29:49 +0200 Modified: trunk/packages/gnumed-client/trunk/debian/control === --- trunk/packages/gnumed-client/trunk/debian/control 2011-04-11 11:14:06 UTC (rev 6521) +++ trunk/packages/gnumed-client/trunk/debian/control 2011-04-11 11:57:59 UTC (rev 6522) @@ -5,7 +5,7 @@ DM-Upload-Allowed: yes Uploaders: Andreas Tille ti...@debian.org Build-Depends: debhelper (= 8), quilt (= 0.47), po-debconf, python (= 2.6) -Standards-Version: 3.9.1 +Standards-Version: 3.9.2 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/gnumed-client/trunk/?rev=0sc=0 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/gnumed-client/trunk/ Homepage: http://www.gnumed.de ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] r6523 - trunk/packages/gnumed-client/tags
Author: tille Date: 2011-04-11 11:59:20 + (Mon, 11 Apr 2011) New Revision: 6523 Added: trunk/packages/gnumed-client/tags/0.9.2-1/ Removed: trunk/packages/gnumed-client/tags/0.8.6-1/ trunk/packages/gnumed-client/tags/0.8.6-2/ trunk/packages/gnumed-client/tags/0.8.7-1/ Log: Tagged 0.9.2-1 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] r6524 - in trunk/packages/cdbfasta/trunk/debian: . patches
Author: tbooth-guest
Date: 2011-04-11 13:33:27 + (Mon, 11 Apr 2011)
New Revision: 6524
Removed:
trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages
Modified:
trunk/packages/cdbfasta/trunk/debian/changelog
trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
trunk/packages/cdbfasta/trunk/debian/rules
Log:
Fixed manpage generation with help from Charles.
Still need to look into the Zlib Lintian report.
Deleted: trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages
===
--- trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages 2011-04-11
11:59:20 UTC (rev 6523)
+++ trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages 2011-04-11
13:33:27 UTC (rev 6524)
@@ -1,2 +0,0 @@
-cdbfasta.1
-cdbyank.1
Modified: trunk/packages/cdbfasta/trunk/debian/changelog
===
--- trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-11 11:59:20 UTC
(rev 6523)
+++ trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-11 13:33:27 UTC
(rev 6524)
@@ -1,3 +1,9 @@
+cdbfasta (0.981-20100722-1ubuntu3) lucid; urgency=low
+
+ * Moved manpage generation to debian/rules as per advice from Charles Plessy
+
+ -- Tim Booth tbo...@ceh.ac.uk Mon, 11 Apr 2011 10:13:37 +0100
+
cdbfasta (0.981-20100722-1ubuntu2) lucid; urgency=low
* Continued work on package - added basic manapages
Modified:
trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
===
--- trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
2011-04-11 11:59:20 UTC (rev 6523)
+++ trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
2011-04-11 13:33:27 UTC (rev 6524)
@@ -5,11 +5,11 @@
.PHONY : all
-all:cdbfasta cdbyank
-+all:cdbfasta cdbyank manpages
++all:cdbfasta cdbyank
debug: all
nommap: all
cdbfasta: ./cdbfasta.o ./gcdbz.o $(LIBS) ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o
-@@ -74,12 +74,17 @@
+@@ -74,12 +74,14 @@
.PHONY : tidy
tidy::
@@ -26,6 +26,3 @@
+install : all
+ install -m 755 cdbfasta cdbyank $(DESTDIR)/usr/bin
-+manpages : cdbfasta.1 cdbyank.1
-+%.1 : %
-+ help2man --no-discard-stderr --version-option=-v $ | sed 's/^Invalid
argument:.*//' $@
Modified: trunk/packages/cdbfasta/trunk/debian/rules
===
--- trunk/packages/cdbfasta/trunk/debian/rules 2011-04-11 11:59:20 UTC (rev
6523)
+++ trunk/packages/cdbfasta/trunk/debian/rules 2011-04-11 13:33:27 UTC (rev
6524)
@@ -11,3 +11,14 @@
%:
dh $@
+
+override_dh_installman:
+ help2man --no-info --no-discard-stderr --version-option=-v cdbfasta |\
+ sed 's/^Invalid argument:.*//' |\
+ sed 's/manual page for cdbfasta version .*/Creates an index file
for records from a multi-fasta file./' \
+cdbfasta.1
+ help2man --no-info --no-discard-stderr --version-option=-v cdbyank |\
+ sed 's/^Invalid argument:.*//' |\
+ sed 's/manual page for cdbyank version .*/Query an index file
created with cdbfasta./' \
+cdbyank.1
+ dh_installman cdbfasta.1 cdbyank.1
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[med-svn] r6525 - in trunk/packages/cdbfasta/trunk/debian: . patches
Author: tbooth-guest Date: 2011-04-11 13:46:56 + (Mon, 11 Apr 2011) New Revision: 6525 Modified: trunk/packages/cdbfasta/trunk/debian/changelog trunk/packages/cdbfasta/trunk/debian/patches/series Log: Quick and dirty but harmless fix for Lintian false positive by tweaking error message. Modified: trunk/packages/cdbfasta/trunk/debian/changelog === --- trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-11 13:33:27 UTC (rev 6524) +++ trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-11 13:46:56 UTC (rev 6525) @@ -1,8 +1,10 @@ cdbfasta (0.981-20100722-1ubuntu3) lucid; urgency=low * Moved manpage generation to debian/rules as per advice from Charles Plessy + * Quick and dirty workaround for Lintian false positive (error message +was being seen as evidence of statically linked ZLib). - -- Tim Booth tbo...@ceh.ac.uk Mon, 11 Apr 2011 10:13:37 +0100 + -- Tim Booth tbo...@ceh.ac.uk Mon, 11 Apr 2011 14:43:39 +0100 cdbfasta (0.981-20100722-1ubuntu2) lucid; urgency=low Modified: trunk/packages/cdbfasta/trunk/debian/patches/series === --- trunk/packages/cdbfasta/trunk/debian/patches/series 2011-04-11 13:33:27 UTC (rev 6524) +++ trunk/packages/cdbfasta/trunk/debian/patches/series 2011-04-11 13:46:56 UTC (rev 6525) @@ -1 +1,2 @@ add-install-target-to-makefile +workaround-lintian-false-positive ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
[med-svn] r6526 - trunk/packages/mriconvert/trunk/debian
Author: smr
Date: 2011-04-12 04:08:30 + (Tue, 12 Apr 2011)
New Revision: 6526
Modified:
trunk/packages/mriconvert/trunk/debian/changelog
trunk/packages/mriconvert/trunk/debian/get-orig-source
Log:
Updates for 2.0.203.
Modified: trunk/packages/mriconvert/trunk/debian/changelog
===
--- trunk/packages/mriconvert/trunk/debian/changelog2011-04-11 13:46:56 UTC
(rev 6525)
+++ trunk/packages/mriconvert/trunk/debian/changelog2011-04-12 04:08:30 UTC
(rev 6526)
@@ -1,11 +1,15 @@
-mriconvert (2.0-3) unstable; urgency=low
+mriconvert (2.0.203-1) unstable; urgency=low
+ [ Mathieu Malaterre ]
* Adding man page for mcverter (help2man)
* Adding watch file
* Adding a get-orig-source file
- -- Mathieu Malaterre mathieu.malate...@gmail.com Tue, 08 Mar 2011 11:00:57
+0100
+ [ Steve M. Robbins ]
+ * New upstream. Update get-orig-source script.
+ -- Steve M. Robbins s...@debian.org Mon, 11 Apr 2011 22:38:03 -0500
+
mriconvert (2.0-2) unstable; urgency=low
* copyright: Replace with correct copyright license statements.
Modified: trunk/packages/mriconvert/trunk/debian/get-orig-source
===
--- trunk/packages/mriconvert/trunk/debian/get-orig-source 2011-04-11
13:46:56 UTC (rev 6525)
+++ trunk/packages/mriconvert/trunk/debian/get-orig-source 2011-04-12
04:08:30 UTC (rev 6526)
@@ -1,18 +1,15 @@
#!/bin/sh
-VERSION=2.0
+VERSION=2.0.203
+OUTDIR=mriconvert-${VERSION}
wget -c http://lcni.uoregon.edu/~jolinda/MRIConvert/mriconvert_sources.zip
-mkdir mriconvert-$VERSION
-unzip mriconvert_sources.zip -d mriconvert-$VERSION
+mkdir $OUTDIR
+unzip mriconvert_sources.zip -d $OUTDIR
-# remove CDF V2 Document, No summary info
-#rm mriconvert-$VERSION/MRIConvert.suo
+( cd $OUTDIR
+rm -f Makefile CMakeCache.txt
+)
-# ELF 32-bit LSB executable, Intel 80386, version 1 (SYSV), dynamically linked
-# (uses shared libs), for GNU/Linux 2.4.1, not stripped
-rm mriconvert-$VERSION/Mcverter
-rm mriconvert-$VERSION/MRIConvert
-
-GZIP=--best --no-name tar cfz mriconvert_$VERSION.orig.tar.gz
mriconvert-$VERSION
-rm -rf mriconvert-$VERSION
+GZIP=--best --no-name tar cfz mriconvert_$VERSION.orig.tar.gz $OUTDIR
+rm -rf $OUTDIR
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[med-svn] r6527 - in trunk/packages/mriconvert/tags: . 2.0.203-1/debian
Author: smr
Date: 2011-04-12 04:33:56 + (Tue, 12 Apr 2011)
New Revision: 6527
Added:
trunk/packages/mriconvert/tags/2.0.203-1/
trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog
trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
Removed:
trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog
trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
Log:
[svn-buildpackage] Tagging mriconvert 2.0.203-1
Deleted: trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog
===
--- trunk/packages/mriconvert/trunk/debian/changelog2011-04-11 13:46:56 UTC
(rev 6525)
+++ trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog 2011-04-12
04:33:56 UTC (rev 6527)
@@ -1,19 +0,0 @@
-mriconvert (2.0-3) unstable; urgency=low
-
- * Adding man page for mcverter (help2man)
- * Adding watch file
- * Adding a get-orig-source file
-
- -- Mathieu Malaterre mathieu.malate...@gmail.com Tue, 08 Mar 2011 11:00:57
+0100
-
-mriconvert (2.0-2) unstable; urgency=low
-
- * copyright: Replace with correct copyright license statements.
-
- -- Steve M. Robbins s...@debian.org Sun, 31 Oct 2010 22:20:49 -0500
-
-mriconvert (2.0-1) unstable; urgency=low
-
- * Initial upload. Closes: #599880.
-
- -- Steve M. Robbins s...@debian.org Tue, 12 Oct 2010 23:40:00 -0500
Copied: trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog (from rev
6526, trunk/packages/mriconvert/trunk/debian/changelog)
===
--- trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog
(rev 0)
+++ trunk/packages/mriconvert/tags/2.0.203-1/debian/changelog 2011-04-12
04:33:56 UTC (rev 6527)
@@ -0,0 +1,23 @@
+mriconvert (2.0.203-1) unstable; urgency=low
+
+ [ Mathieu Malaterre ]
+ * Adding man page for mcverter (help2man)
+ * Adding watch file
+ * Adding a get-orig-source file
+
+ [ Steve M. Robbins ]
+ * New upstream. Update get-orig-source script.
+
+ -- Steve M. Robbins s...@debian.org Mon, 11 Apr 2011 22:38:03 -0500
+
+mriconvert (2.0-2) unstable; urgency=low
+
+ * copyright: Replace with correct copyright license statements.
+
+ -- Steve M. Robbins s...@debian.org Sun, 31 Oct 2010 22:20:49 -0500
+
+mriconvert (2.0-1) unstable; urgency=low
+
+ * Initial upload. Closes: #599880.
+
+ -- Steve M. Robbins s...@debian.org Tue, 12 Oct 2010 23:40:00 -0500
Deleted: trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
===
--- trunk/packages/mriconvert/trunk/debian/get-orig-source 2011-04-11
13:46:56 UTC (rev 6525)
+++ trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
2011-04-12 04:33:56 UTC (rev 6527)
@@ -1,18 +0,0 @@
-#!/bin/sh
-
-VERSION=2.0
-
-wget -c http://lcni.uoregon.edu/~jolinda/MRIConvert/mriconvert_sources.zip
-mkdir mriconvert-$VERSION
-unzip mriconvert_sources.zip -d mriconvert-$VERSION
-
-# remove CDF V2 Document, No summary info
-#rm mriconvert-$VERSION/MRIConvert.suo
-
-# ELF 32-bit LSB executable, Intel 80386, version 1 (SYSV), dynamically linked
-# (uses shared libs), for GNU/Linux 2.4.1, not stripped
-rm mriconvert-$VERSION/Mcverter
-rm mriconvert-$VERSION/MRIConvert
-
-GZIP=--best --no-name tar cfz mriconvert_$VERSION.orig.tar.gz
mriconvert-$VERSION
-rm -rf mriconvert-$VERSION
Copied: trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source (from
rev 6526, trunk/packages/mriconvert/trunk/debian/get-orig-source)
===
--- trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
(rev 0)
+++ trunk/packages/mriconvert/tags/2.0.203-1/debian/get-orig-source
2011-04-12 04:33:56 UTC (rev 6527)
@@ -0,0 +1,15 @@
+#!/bin/sh
+
+VERSION=2.0.203
+OUTDIR=mriconvert-${VERSION}
+
+wget -c http://lcni.uoregon.edu/~jolinda/MRIConvert/mriconvert_sources.zip
+mkdir $OUTDIR
+unzip mriconvert_sources.zip -d $OUTDIR
+
+( cd $OUTDIR
+rm -f Makefile CMakeCache.txt
+)
+
+GZIP=--best --no-name tar cfz mriconvert_$VERSION.orig.tar.gz $OUTDIR
+rm -rf $OUTDIR
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