Bug#706711: Orphaning package

2017-09-14 Thread Tobias Frost
Followup-For: Bug #706711

As the only (human) maintainer of this package is no longer active,
the package is technically/policywise orphaned.

The Science Team is in Debbugs-CC, as this package is under their realm.

--
tobi (MIA team)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Bug#835016: Orphaning package freefem

2017-09-14 Thread Tobias Frost
Followup-For: Bug #835016

The "Remove from Uploader" bug was Freefem's sole (human) maintainer, so the
package is technically/policy wise orphaned.

The Debian Science Team is in Debbugs-CC, so that they can regrab it if desired.

--
tobi (MIA Team)

-- System Information:
Debian Release: buster/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'stable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.12.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8), 
LANGUAGE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Processed: reassign 835016 to wnpp ...

2017-09-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 835016 wnpp
Bug #835016 [src:freefem] Updating the freefem Uploaders list
Bug reassigned from package 'src:freefem' to 'wnpp'.
No longer marked as found in versions freefem/3.5.8-5.1.
Ignoring request to alter fixed versions of bug #835016 to the same values 
previously set
> # reassigning to wnpp and orphaning it, as only human mainainer is gone
> retitle 835016 O: freefem -- PDE oriented language using Finite Element 
> Method, severity it normal,
Bug #835016 [wnpp] Updating the freefem Uploaders list
Changed Bug title to 'O: freefem -- PDE oriented language using Finite Element 
Method, severity it normal,' from 'Updating the freefem Uploaders list'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
835016: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835016
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


apertium-srd is marked for autoremoval from testing

2017-09-14 Thread Debian testing autoremoval watch
apertium-srd 0.10.0~r82237-1 is marked for autoremoval from testing on 
2017-09-22

It (build-)depends on packages with these RC bugs:
871145: hfst: FTBFS: ./../include/fst/replace.h:1061:46: error: expected ';' 
before '::' token
874563: apertium-all-dev: please switch dependency from libhfst45-dev to 
libhfst-dev (or libhfst49-dev)


-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


ros-rospkg 1.1.2-1 MIGRATED to testing

2017-09-14 Thread Debian testing watch
FYI: The status of the ros-rospkg source package
in Debian's testing distribution has changed.

  Previous version: 1.1.1-1
  Current version:  1.1.2-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


ros-catkin-pkg 0.3.6-1 MIGRATED to testing

2017-09-14 Thread Debian testing watch
FYI: The status of the ros-catkin-pkg source package
in Debian's testing distribution has changed.

  Previous version: 0.3.5-3
  Current version:  0.3.6-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


apertium-srd-ita 0.9.5~r82237-1 MIGRATED to testing

2017-09-14 Thread Debian testing watch
FYI: The status of the apertium-srd-ita source package
in Debian's testing distribution has changed.

  Previous version: 0.9.0~r72554-1
  Current version:  0.9.5~r82237-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


freecad is marked for autoremoval from testing

2017-09-14 Thread Debian testing autoremoval watch
freecad 0.16.6712+dfsg1-1 is marked for autoremoval from testing on 2017-10-14

It (build-)depends on packages with these RC bugs:
784512: pyside: [pyside] Qt4's WebKit removal


-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


apertium-cat is marked for autoremoval from testing

2017-09-14 Thread Debian testing autoremoval watch
apertium-cat 2.3.0~r82237-1 is marked for autoremoval from testing on 2017-09-22

It (build-)depends on packages with these RC bugs:
871145: hfst: FTBFS: ./../include/fst/replace.h:1061:46: error: expected ';' 
before '::' token
874563: apertium-all-dev: please switch dependency from libhfst45-dev to 
libhfst-dev (or libhfst49-dev)


-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Processed: tagging 872314 + pending

2017-09-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 872314 + pending
Bug #872314 [src:pytables] pytables: FTBFS with Sphinx 1.6: Needs build-dep on 
latexmk
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
872314: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=872314
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Processed: unarchiving 811763, found 811763 in 2.1.20140911-1~exp1, tagging 811763

2017-09-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> unarchive 811763
Bug #811763 {Done: Adrian Bunk } [clipper] clipper: FTBFS with 
GCC 6: narrowing conversion
Unarchived Bug 811763
> found 811763 2.1.20140911-1~exp1
Bug #811763 {Done: Adrian Bunk } [clipper] clipper: FTBFS with 
GCC 6: narrowing conversion
There is no source info for the package 'clipper' at version 
'2.1.20140911-1~exp1' with architecture ''
Unable to make a source version for version '2.1.20140911-1~exp1'
Marked as found in versions 2.1.20140911-1~exp1 and reopened.
> tags 811763 + experimental
Bug #811763 [clipper] clipper: FTBFS with GCC 6: narrowing conversion
Added tag(s) experimental.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
811763: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=811763
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Proposta de Montagem de Site, Blog ou Loja

2017-09-14 Thread ProjetoCafé
[[HEADLINE]]

[[PERMALINK_FULL_LINK]]







TITLE OF YOUR EMAIL

The content of your email goes here.

You can drag and drop blocks of text, images or other content elements to add 
them to your message. Customize the font and the colors. Add links to track 
clicks.







This is a second paragraph you can customize as your please.

If you have stored contact properties with your contacts, you can include 
personalization variables such as first name, last name in your message content.



[[DELIVERY_INFO]]
[[POSTAL_ADDRESS]]-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#875812: kbibtex-data: fails to upgrade from 'testing' - trying to overwrite /usr/share/icons/hicolor/128x128/apps/kbibtex.png

2017-09-14 Thread Andreas Beckmann
Package: kbibtex-data
Version: 0.8~20170819git31a77b27e8e83836e-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package kbibtex-data.
  Preparing to unpack 
.../26-kbibtex-data_0.8~20170819git31a77b27e8e83836e-1_all.deb ...
  Unpacking kbibtex-data (0.8~20170819git31a77b27e8e83836e-1) ...
  dpkg: error processing archive 
/tmp/apt-dpkg-install-Qnbzx9/26-kbibtex-data_0.8~20170819git31a77b27e8e83836e-1_all.deb
 (--unpack):
   trying to overwrite '/usr/share/icons/hicolor/128x128/apps/kbibtex.png', 
which is also in package kbibtex 0.4-4+b2
  dpkg-deb: error: subprocess paste was killed by signal (Broken pipe)


cheers,

Andreas


kbibtex=0.4-4+b2_kbibtex-data=0.8~20170819git31a77b27e8e83836e-1.log.gz
Description: application/gzip
-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Processed: [bts-link] source package src:opencv

2017-09-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> #
> # bts-link upstream status pull for source package src:opencv
> # see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
> #
> user bts-link-upstr...@lists.alioth.debian.org
Setting user to bts-link-upstr...@lists.alioth.debian.org (was 
bts-link-de...@lists.alioth.debian.org).
> # remote status report for #875342 (http://bugs.debian.org/875342)
> # Bug title: opencv: CVE-2017-12862: AutoBuffer_heap_overflow in grfmt_pxm.cpp
> #  * https://github.com/opencv/opencv/issues/9370
> #  * remote status changed: (?) -> closed
> #  * closed upstream
> tags 875342 + fixed-upstream
Bug #875342 [src:opencv] opencv: CVE-2017-12862: AutoBuffer_heap_overflow in 
grfmt_pxm.cpp
Added tag(s) fixed-upstream.
> usertags 875342 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> # remote status report for #875344 (http://bugs.debian.org/875344)
> # Bug title: opencv: CVE-2017-12863: Integer overflow in PxMDecoder::readData
> #  * https://github.com/opencv/opencv/issues/9371
> #  * remote status changed: (?) -> closed
> #  * closed upstream
> tags 875344 + fixed-upstream
Bug #875344 [src:opencv] opencv: CVE-2017-12863: Integer overflow in 
PxMDecoder::readData
Added tag(s) fixed-upstream.
> usertags 875344 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> # remote status report for #875345 (http://bugs.debian.org/875345)
> # Bug title: opencv: CVE-2017-12864: Integer overflow in ReadNumber
> #  * https://github.com/opencv/opencv/issues/9372
> #  * remote status changed: (?) -> closed
> #  * closed upstream
> tags 875345 + fixed-upstream
Bug #875345 [src:opencv] opencv: CVE-2017-12864: Integer overflow in ReadNumber
Added tag(s) fixed-upstream.
> usertags 875345 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
875342: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875342
875344: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875344
875345: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875345
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


[bts-link] source package src:opencv

2017-09-14 Thread bts-link-upstream
#
# bts-link upstream status pull for source package src:opencv
# see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
#

user bts-link-upstr...@lists.alioth.debian.org

# remote status report for #875342 (http://bugs.debian.org/875342)
# Bug title: opencv: CVE-2017-12862: AutoBuffer_heap_overflow in grfmt_pxm.cpp
#  * https://github.com/opencv/opencv/issues/9370
#  * remote status changed: (?) -> closed
#  * closed upstream
tags 875342 + fixed-upstream
usertags 875342 + status-closed

# remote status report for #875344 (http://bugs.debian.org/875344)
# Bug title: opencv: CVE-2017-12863: Integer overflow in PxMDecoder::readData
#  * https://github.com/opencv/opencv/issues/9371
#  * remote status changed: (?) -> closed
#  * closed upstream
tags 875344 + fixed-upstream
usertags 875344 + status-closed

# remote status report for #875345 (http://bugs.debian.org/875345)
# Bug title: opencv: CVE-2017-12864: Integer overflow in ReadNumber
#  * https://github.com/opencv/opencv/issues/9372
#  * remote status changed: (?) -> closed
#  * closed upstream
tags 875345 + fixed-upstream
usertags 875345 + status-closed

thanks

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


plplot_5.13.0+dfsg-1~exp1_amd64.changes ACCEPTED into experimental, experimental

2017-09-14 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 08 Sep 2017 22:00:33 +0200
Source: plplot
Binary: libplplot15 libplplot-dev libplplotcxx13 libplplotfortran0 
libplplot-java libcsironn0 libcsirocsa0 libqsastime0 libqsastime-dev 
plplot-driver-xwin plplot-driver-wxwidgets libplplotwxwidgets1 plplot-tcl 
plplot-tcl-bin plplot-tcl-dev plplot-driver-cairo plplot-driver-qt libplplotqt2 
python-plplot python-plplot-qt python3-plplot python3-plplot-qt octave-plplot 
libplplotada2 libplplot-ada-dev plplot-doc libplplot-ocaml libplplot-ocaml-dev 
libplplot-lua
Architecture: source amd64 all
Version: 5.13.0+dfsg-1~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Ole Streicher 
Description:
 libcsirocsa0 - Scientific plotting library (CSIRO csa library)
 libcsironn0 - Scientific plotting library (CSIRO nn library)
 libplplot-ada-dev - Ada support for PLplot, a plotting library (development 
files)
 libplplot-dev - Scientific plotting library (development files)
 libplplot-java - Scientific plotting library (Java bindings)
 libplplot-lua - Scientific plotting library (Lua bindings)
 libplplot-ocaml - OCaml bindings for the scientific plotting library
 libplplot-ocaml-dev - OCaml support for the PLplot plotting library 
(development files)
 libplplot15 - Scientific plotting library
 libplplotada2 - Ada support for PLplot, a plotting library
 libplplotcxx13 - Scientific plotting library (C++ binding)
 libplplotfortran0 - Scientific plotting library (fortran bindings)
 libplplotqt2 - Scientific plotting library (Qt bindings)
 libplplotwxwidgets1 - Scientific plotting library (wxWidgets bindings)
 libqsastime-dev - Time format conversion library (development files)
 libqsastime0 - Time format conversion library
 octave-plplot - Octave support for PLplot, a plotting library
 plplot-doc - Documentation for PLplot, a plotting library
 plplot-driver-cairo - Scientific plotting library (Cairo driver)
 plplot-driver-qt - Scientific plotting library (Qt driver)
 plplot-driver-wxwidgets - Scientific plotting library (wxWidgets driver)
 plplot-driver-xwin - Scientific plotting library (X11 driver)
 plplot-tcl - Tcl/Tk support for PLplot, a plotting library
 plplot-tcl-bin - Tcl/Tk tools for PLplot, a plotting library
 plplot-tcl-dev - Tcl/Tk development support for PLplot, a plotting library
 python-plplot - Python 2 support for PLplot, a plotting library
 python-plplot-qt - Scientific plotting library (Python 2 Qt GUI)
 python3-plplot - Python 3 support for PLplot, a plotting library
 python3-plplot-qt - Scientific plotting library (Python 3 Qt GUI)
Closes: 500687 762735 762737 763736 787818 873998
Changes:
 plplot (5.13.0+dfsg-1~exp1) experimental; urgency=medium
 .
   * New maintainer and debian-science team maintenance
   * Push Standards-Version to 4.1.0
   * Update maintainer and URLs in d/control and d/copyright
   * New upstream version 5.13.0+dfsg. Closes: #873998
   * Switch to experimental. Prepare transition for new SONAMEs
   * New/re-enabled bindings: ocaml, ada, python3, python3-qt, octave
   * Disable OCaml Cairo bindings (not built upstream by default)
   * Split CSIRO package in to nn and csiro packages
   * Update license of csiro and nn libraries. Closes: #500687
   * Use Qt5 instead of Qt4
   * Separate wxwindows and Qt driver from bindings
   * Reformat patches for gbp
   * Simplify debian files. Revert preprocessing for d/control.in
   * Fix dependencies. Closes: #787818
   * Remove Multi-Arch from plplot-tcl. Closes: #763736
   * Install unprocessed examples. Closes: #762735, #762737
   * Add build time tests
   * Initial d/u/metadata
   * Added Build-bindings-for-all-Python-versions.patch
Checksums-Sha1:
 75bc5afb7cfaf040536ca0574db3a225871ef971 4711 plplot_5.13.0+dfsg-1~exp1.dsc
 11a89012624add7d1244c16273c57f9c642d358a 7040960 plplot_5.13.0+dfsg.orig.tar.gz
 e0311bf7b5dcf57aff86cff536589d3cd1ca6a39 473 plplot_5.13.0+dfsg.orig.tar.gz.asc
 c0d6ce2288e56e54ca2baca145b35012122dc0f2 38968 
plplot_5.13.0+dfsg-1~exp1.debian.tar.xz
 aace9f9fbf39a82b010d2ba706abb9a985c4d3a5 21938 
libcsirocsa0-dbgsym_5.13.0+dfsg-1~exp1_amd64.deb
 114c12c116e33828f2251512ba18055c83016de8 106884 
libcsirocsa0_5.13.0+dfsg-1~exp1_amd64.deb
 cf36f3f466ae2ed1dd0b0c2ba200f0e1b5e278db 36492 
libcsironn0-dbgsym_5.13.0+dfsg-1~exp1_amd64.deb
 c1411bd8f3f8441d647d996ccf146fc42182b23f 106242 
libcsironn0_5.13.0+dfsg-1~exp1_amd64.deb
 6e27483f97435b7fd21c953eaeb4b9a8210d5204 197464 
libplplot-ada-dev_5.13.0+dfsg-1~exp1_amd64.deb
 cd9b14c4d6f5cfaa35a398952c6ee8b193a52eb5 423048 
libplplot-dev_5.13.0+dfsg-1~exp1_amd64.deb
 222c3319b2ea3a19400413d37297a0164247ce24 115476 
libplplot-java-dbgsym_5.13.0+dfsg-1~exp1_amd64.deb
 8da194138c52ab9e1cbaf768f83b2e1a13b4ac2c 317168 
libplplot-java_5.13.0+dfsg-1~exp1_amd64.deb
 077ad3c6136cb77b4193ba27be9976888ff04246 122498 

Processed: tagging 868024, tagging 868780, tagging 870689, tagging 869155, tagging 870666, tagging 816808 ...

2017-09-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 868024 + sid
Bug #868024 [fusiondirectory] fusiondirectory: maintainer address broken
Added tag(s) sid.
> tags 868780 + sid buster
Bug #868780 {Done: Daniel Stender } [src:pytest-catchlog] 
pytest-catchlog: latest pytest breaks test_compat_camel_case_aliases
Added tag(s) buster and sid.
> tags 870689 + sid buster
Bug #870689 [src:harfbuzz] harfbuzz: FTBFS: dpkg-gensymbols errors
Added tag(s) sid and buster.
> tags 869155 + sid buster
Bug #869155 [src:debian-design] design-desktop-graphics: Please replace gcolor2 
with gpick
Added tag(s) buster and sid.
> tags 870666 + sid buster
Bug #870666 {Done: Yves-Alexis Perez } [src:libxfcegui4] 
libxfcegui4 FTBFS: ./configure: line 13746: syntax error near unexpected token 
`am'
Added tag(s) sid and buster.
> tags 816808 + sid buster
Bug #816808 {Done: Bernd Zeimetz } [src:gpsbabel] [gpsbabel] 
Qt4's WebKit removal
Added tag(s) buster and sid.
> found 874065 1:0.0.1+cvs20140707-3
Bug #874065 [src:unrar-free] unrar-free: Should unrar-free be removed from the 
archive? Alternatives (libarchive) exist; unmaintained upstream; has security 
issues
Marked as found in versions unrar-free/1:0.0.1+cvs20140707-3.
> tags 874344 + sid buster
Bug #874344 {Done: Matthias Klose } [python-scipy] 
python-scipy: Fail to import with "undefined symbol: PyFPE_jbuf"
Added tag(s) buster and sid.
> tags 868955 + sid buster
Bug #868955 [redmine] redmine: buster - broken install, package cannot be 
removed
Added tag(s) sid and buster.
> tags 875612 + sid buster
Bug #875612 [ruby-compass-rails] ruby-compass-rails: ruby-compass obsolete and 
now broken
Added tag(s) sid and buster.
> found 875612 2.0.5-5
Bug #875612 [ruby-compass-rails] ruby-compass-rails: ruby-compass obsolete and 
now broken
Marked as found in versions ruby-compass-rails/2.0.5-5.
> found 875510 4.8.0-1
Bug #875510 {Done: Cédric Boutillier } [src:nanoc] nanoc: 
ruby-compass obsolete and now broken
Marked as found in versions nanoc/4.8.0-1.
> found 875611 1.0.1+ds1-1
Bug #875611 [src:sagenb] sagenb: ruby-compass obsolete and now broken
Marked as found in versions sagenb/1.0.1+ds1-1.
> tags 874384 + sid buster
Bug #874384 {Done: Jeremy Bicha } [src:bijiben] bijiben: 
tracker2 trasition
Added tag(s) buster and sid.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
816808: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816808
868024: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=868024
868780: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=868780
868955: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=868955
869155: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=869155
870666: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=870666
870689: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=870689
874065: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874065
874344: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874344
874384: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874384
875510: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875510
875611: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875611
875612: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875612
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#875790: FTBFS with Java 9: configure fails to detect Java

2017-09-14 Thread Chris West
Source: scilab
Version: 5.5.2-5
Severity: normal
User: debian-j...@lists.debian.org
Usertags: default-java9

This package fails to build with default-jdk pointing to openjdk-9-jdk.
Please fix it, so that we can start the transition to Java 9.
The wiki has some common problems and their solutions:
https://wiki.debian.org/Java/Java9Pitfalls

The "/jre" part of the install path is gone. Also, many of the libraries
have moved. I'm not sure why configure cares so much about the actual
locations.

Build log:

checking type of jvm... jdk
checking java API version... 1.8
Using the following JNI include flags 
-I/usr/lib/jvm/java-9-openjdk-amd64/include 
-I/usr/lib/jvm/java-9-openjdk-amd64/include/linux
checking if jni.h can be included... yes
Looking for JNI libs with x86_64 as machine hardware name
Looking for /usr/lib/jvm/java-9-openjdk-amd64/jre/lib/x86_64/libjava.so
Looking for /usr/lib/jvm/java-9-openjdk-amd64/jre/lib/amd64/libjava.so
Looking for /usr/lib/jvm/java-9-openjdk-amd64/jre/lib/i386/client/libjvm.so
Looking for /usr/lib/jvm/java-9-openjdk-amd64/jre/bin/classic/libjvm.so
Looking for /usr/lib/jvm/java-9-openjdk-amd64/lib/jvm.lib
Looking for /usr/lib/jvm/java-9-openjdk-amd64/jre/lib/mipsel/libjava.so
configure: error: Could not detect the location of the Java
shared library. You will need to update java.m4
to add support for this JVM configuration.
make: *** [debian/stamp-autotools] Error 1
/usr/share/cdbs/1/class/autotools.mk:44: recipe for target 
'debian/stamp-autotools' failed
dpkg-buildpackage: error: debian/rules build gave error exit status 2




Cheers,
Chris.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Processing of fenics_2017.1.0.1_source.changes

2017-09-14 Thread Debian FTP Masters
/fenics_2017.1.0.1_source.changes couldn't be processed for 48 hours and is now 
deleted
All files it mentions are also removed:
  fenics_2017.1.0.1.dsc, fenics_2017.1.0.1.tar.xz

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Bug#875618: openblas: please enable build on s390x

2017-09-14 Thread Christian Borntraeger


On 09/14/2017 09:58 AM, Sébastien Villemot wrote:
> On Wed, Sep 13, 2017 at 08:33:08PM +, PICCA Frederic-Emmanuel wrote:
>> Hello 
>>
>>> Unfortunately it does not look that simple. OpenBLAS is optimized for z13, 
>>> but
>>> our s390x port is supposed to support all the z systems (see [1]).
>>
>> what about asking for a a z13-support package to the isa-support (source
>> package) maintainer. This way it could be possible to upload an optimise
>> vesion of openblas which can install on recent enought s390x machines.
> 
> I am not totally convinced by this solution. If we adopt it, somebody who
> installs e.g. octave on an old system-z machine will be hit by a failure in 
> the
> dpkg installation process, which needs manual intervention. This is likely to
> generate problems in automated installers (and also confuse and annoy system
> admins).
> 
>> the question will be then : does the buildd support these instructions ?
> 
> I leave that to the s390 porters to answer.

FWIW, some years ago I did the atlas port for s390x. For dynamic linking the 
atlas
build/package process did support the exploitation of ELF HW_CAPS. So you could 
build a z900 (generic) and a z13 variant which is then picked by the linker at 
runtime. No idea if openblas allows the same. Of course the static variant (.a) 
must be the generic one.

Christian

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

r-cran-httpuv_1.3.5-1_amd64.changes ACCEPTED into unstable

2017-09-14 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 14 Sep 2017 13:36:54 +0200
Source: r-cran-httpuv
Binary: r-cran-httpuv
Architecture: source amd64
Version: 1.3.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Andreas Tille 
Description:
 r-cran-httpuv - GNU R package of HTTP and WebSocket Server Library
Changes:
 r-cran-httpuv (1.3.5-1) unstable; urgency=medium
 .
   * Team upload
   * New upstream version
   * debhelper 10
   * cme fix dpkg-control
   * Convert from cdbs to dh-r
   * Canonical homepage URL for CRAN packages
Checksums-Sha1:
 029d0ec13c5328614d24570df24da5a52d43ddfb 2038 r-cran-httpuv_1.3.5-1.dsc
 ae338b9f7bf6a44b2e7e119d93bda88ea9744faa 427638 r-cran-httpuv_1.3.5.orig.tar.gz
 90617a653ec8b9cc84f84d9448b72dbd0db8ccd9 3640 
r-cran-httpuv_1.3.5-1.debian.tar.xz
 0bca050d8933ebea8aa191ef2e08c67aa17d 1107438 
r-cran-httpuv-dbgsym_1.3.5-1_amd64.deb
 95fe402663d4fc494ef2e0d79824403e88493002 8583 
r-cran-httpuv_1.3.5-1_amd64.buildinfo
 751f236054b6c922ac258fe51b3e9cfa670fca6b 250890 r-cran-httpuv_1.3.5-1_amd64.deb
Checksums-Sha256:
 1419f28253f4f55752113fa22fe033593cb850b603be677f6090feee3c0da9bd 2038 
r-cran-httpuv_1.3.5-1.dsc
 4336b993afccca2a194aca577b1975b89a35ac863423b18a11cdbb3f8470e4e9 427638 
r-cran-httpuv_1.3.5.orig.tar.gz
 cc05866a07b830775132b4ff395d7f6a70d6993e0ab5eecb1c0c1e50b4e0f599 3640 
r-cran-httpuv_1.3.5-1.debian.tar.xz
 c1ce5c469f6c36ff430ee37d798331957281009bbd6908783ce2d20c44b5b9da 1107438 
r-cran-httpuv-dbgsym_1.3.5-1_amd64.deb
 a4a1a73dbf3aeb2d778aca6ac9eb73540c3b6cde0a15ff93097cb752e8674acf 8583 
r-cran-httpuv_1.3.5-1_amd64.buildinfo
 511472f6a83eb24ca5bf2ccfa24199873cea3892a0342fce759df1457b55aa66 250890 
r-cran-httpuv_1.3.5-1_amd64.deb
Files:
 445e15cae38526f5d4bac7319adee101 2038 gnu-r optional r-cran-httpuv_1.3.5-1.dsc
 48d894ff0067148f41a651634fbb2012 427638 gnu-r optional 
r-cran-httpuv_1.3.5.orig.tar.gz
 3152a3a6c7623194b864d3233270e909 3640 gnu-r optional 
r-cran-httpuv_1.3.5-1.debian.tar.xz
 1ea7d854d47127fc6891b464377bc5cf 1107438 debug optional 
r-cran-httpuv-dbgsym_1.3.5-1_amd64.deb
 c88e72a95d939062b7bef5a65df0c41f 8583 gnu-r optional 
r-cran-httpuv_1.3.5-1_amd64.buildinfo
 15234400601ce3408996cdade1daaabe 250890 gnu-r optional 
r-cran-httpuv_1.3.5-1_amd64.deb

-BEGIN PGP SIGNATURE-
Version: GnuPG v1
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=vo9T
-END PGP SIGNATURE-


Thank you for your contribution to Debian.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Processing of r-cran-httpuv_1.3.5-1_amd64.changes

2017-09-14 Thread Debian FTP Masters
r-cran-httpuv_1.3.5-1_amd64.changes uploaded successfully to localhost
along with the files:
  r-cran-httpuv_1.3.5-1.dsc
  r-cran-httpuv_1.3.5.orig.tar.gz
  r-cran-httpuv_1.3.5-1.debian.tar.xz
  r-cran-httpuv-dbgsym_1.3.5-1_amd64.deb
  r-cran-httpuv_1.3.5-1_amd64.buildinfo
  r-cran-httpuv_1.3.5-1_amd64.deb

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


python-meshio_1.8.16-1_amd64.changes ACCEPTED into unstable

2017-09-14 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 13 Sep 2017 09:41:09 +0100
Source: python-meshio
Binary: python3-meshio meshio-tools
Architecture: source all
Version: 1.8.16-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 meshio-tools - command-line tools for meshio
 python3-meshio - library for reading and writing mesh data (Python 3)
Changes:
 python-meshio (1.8.16-1) unstable; urgency=medium
 .
   * New upstream version 1.8.16
   * Filter egg-info directory with extend-diff-ignore
   * Add recommended get-orig-source target
   * Fixup whitespacing in rules file
   * Add Nico Schlömer to Uploaders
   * Bump the standards version to 4.1.0
Checksums-Sha1:
 85702cc11c857df7a727cf97b051ff5a39460420 2312 python-meshio_1.8.16-1.dsc
 0cd5992b39fbbe64d0873f7cadbb69506a8b3373 24906 python-meshio_1.8.16.orig.tar.gz
 6617370c423d5adab5b950cb7f81e9ec28c4db19 3292 
python-meshio_1.8.16-1.debian.tar.xz
 77b56480634a3361c1a27e4ad22637baaa2ba9bb 4204 meshio-tools_1.8.16-1_all.deb
 16cbeaafc1ede3675021314d940428d0f4f3332e 6824 
python-meshio_1.8.16-1_amd64.buildinfo
 331c6ffeb0a6447834cede3d4136d9bac0d599ea 19834 python3-meshio_1.8.16-1_all.deb
Checksums-Sha256:
 32f57051f65c2a5ef916ae6d13193ac4ab88e236c986ef72646e230d182d5e4a 2312 
python-meshio_1.8.16-1.dsc
 46e90684b63d4985cd3320e227341aa5c345fb62f1b13e36c891277cfcd90b6f 24906 
python-meshio_1.8.16.orig.tar.gz
 45f6420e9d6848710d04ef82b007da153ba1e4328cfc0852cafd1f1ac7704196 3292 
python-meshio_1.8.16-1.debian.tar.xz
 8c863ea63010027993f6fbf32c6a1eacf0f8ec3f6284467b4d448b964d2e667a 4204 
meshio-tools_1.8.16-1_all.deb
 5cb9aaffaa9cecfa532a27014fec02d1c6abf8e58e1505b9be0d105b776b911c 6824 
python-meshio_1.8.16-1_amd64.buildinfo
 fc4ce7feccf4460a824f5cf03b019112d28caadbda7dca74d6ebeefc471a2951 19834 
python3-meshio_1.8.16-1_all.deb
Files:
 d8beb87ae48cc361862e73b0501b578d 2312 python optional 
python-meshio_1.8.16-1.dsc
 79d35e3c5893abeea8ff5fae0fea5e45 24906 python optional 
python-meshio_1.8.16.orig.tar.gz
 f8ca1f4415aa1901dc084f9032b59787 3292 python optional 
python-meshio_1.8.16-1.debian.tar.xz
 77ca48efab65aee35a727c6cbc683c48 4204 utils optional 
meshio-tools_1.8.16-1_all.deb
 4496d5f58b145ab34338f385376dc70c 6824 python optional 
python-meshio_1.8.16-1_amd64.buildinfo
 35b98e07c4e3382a7671e4a663e4d5c9 19834 python optional 
python3-meshio_1.8.16-1_all.deb

-BEGIN PGP SIGNATURE-
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=GQ7c
-END PGP SIGNATURE-


Thank you for your contribution to Debian.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Processing of python-meshio_1.8.16-1_amd64.changes

2017-09-14 Thread Debian FTP Masters
python-meshio_1.8.16-1_amd64.changes uploaded successfully to localhost
along with the files:
  python-meshio_1.8.16-1.dsc
  python-meshio_1.8.16.orig.tar.gz
  python-meshio_1.8.16-1.debian.tar.xz
  meshio-tools_1.8.16-1_all.deb
  python-meshio_1.8.16-1_amd64.buildinfo
  python3-meshio_1.8.16-1_all.deb

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Bug#875697: marked as done (arpack: debian versions 3.4.0-1 and 3.5.0-1 are actually upstream version 3.3.0)

2017-09-14 Thread Debian Bug Tracking System
Your message dated Thu, 14 Sep 2017 10:49:27 +
with message-id 
and subject line Bug#875697: fixed in arpack 3.5.0+real-1
has caused the Debian Bug report #875697,
regarding arpack: debian versions 3.4.0-1 and 3.5.0-1 are actually upstream 
version 3.3.0
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
875697: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875697
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: arpack
Version: 3.5.0-1+b1
Severity: important

Dear Maintainer,

I noticed that arpack 3.4.0-1 and 3.5.0-1 are actually built from the
upstream source version 3.3.0. The sources in the Debian archive are
identical:

$ sha256sum arpack_*.orig.tar.gz
ad59811e7d79d50b8ba19fd908f92a3683d883597b2c7759fdcc38f6311fe5b3  
arpack_3.3.0.orig.tar.gz
ad59811e7d79d50b8ba19fd908f92a3683d883597b2c7759fdcc38f6311fe5b3  
arpack_3.4.0.orig.tar.gz
ad59811e7d79d50b8ba19fd908f92a3683d883597b2c7759fdcc38f6311fe5b3  
arpack_3.5.0.orig.tar.gz

Please provide a package built from the true 3.5.0 upstream source.

Please note that this also affects stable.

Thank you for your work on arpack.

-- System Information:
Debian Release: buster/sid
  APT prefers testing
  APT policy: (900, 'testing'), (800, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 4.12.0-1-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)


signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: arpack
Source-Version: 3.5.0+real-1

We believe that the bug you reported is fixed in the latest version of
arpack, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 875...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sébastien Villemot  (supplier of updated arpack package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 14 Sep 2017 12:16:59 +0200
Source: arpack
Binary: libarpack2 libarpack2-dev libparpack2 libparpack2-dev
Architecture: source
Version: 3.5.0+real-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Sébastien Villemot 
Description:
 libarpack2 - Fortran77 subroutines to solve large scale eigenvalue problems
 libarpack2-dev - Fortran77 subroutines to solve large scale eigenvalue 
problems (d
 libparpack2 - Parallel subroutines to solve large scale eigenvalue problems
 libparpack2-dev - Parallel subroutines to solve large scale eigenvalue 
problems (de
Closes: 757189 875697
Changes:
 arpack (3.5.0+real-1) unstable; urgency=medium
 .
   * Team upload.
   * Really upload 3.5.0 upstream release. (Closes: #875697)
   * Fix debian/watch file (and upgrade to format version 4).
   * Update symbols file for libparpack2.
   * Bump to debhelper compat level 10.
   * Mark shared and development library packages as Multi-Arch: same.
   * Enforce generic BLAS (to avoid tying to ATLAS or OpenBLAS).
   * Ship arpack.pc in libarpack2-dev.
   * Use canonical URLs for Vcs-* fields.
   * Install doc using dh_installdocs (instead of dh_install).
   * Migrate to -dbgsym debug packages.
   * Bump priority of -dev packages to optional, per policy 4.0.1.
   * Add BLAS/LAPACK virtual -dev packages as alternatives in dependency list of
 ARPACK -dev packages (Closes: #757189)
   * Bump Standards-Version to 4.1.0.
   * Remove obsolete README.source.
   * Remove obsolete source lintian override.
   * Remove obsolete Conflicts+Replaces on arpack2{,-dev}.
Checksums-Sha1:
 070f18834735cdf01a0cca8892511e3d4078e392 2213 arpack_3.5.0+real-1.dsc
 acbbe14b03b323f84236553872396345204dea1e 949853 arpack_3.5.0+real.orig.tar.gz
 4fea9394d6ed2abef029c5cc1a666992ad588e5d 8540 arpack_3.5.0+real-1.debian.tar.xz
 480baea0e99cf194554ac672283b4e68b645f78c 7655 
arpack_3.5.0+real-1_amd64.buildinfo
Checksums-Sha256:
 2f83f6dd468dcd0b27bc4d5747348456bab7ad87bb4b492bd9549cb599d82128 2213 

Bug#757189: marked as done (libarpack2-dev: Please add BLAS/LAPACK dependency to virtual package)

2017-09-14 Thread Debian Bug Tracking System
Your message dated Thu, 14 Sep 2017 10:49:27 +
with message-id 
and subject line Bug#757189: fixed in arpack 3.5.0+real-1
has caused the Debian Bug report #757189,
regarding libarpack2-dev: Please add BLAS/LAPACK dependency to virtual package
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
757189: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=757189
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libarpack2-dev
Version: 3.1.5-3
Severity: wishlist
Tags: patch

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Dear Maintainer,

Currently, libarpack2-dev depends on specific BLAS/LAPACK implementation:
libblas-dev and liblapack-dev. However, this prevents me from uninstalling
liblapack-dev and install libopenblas-dev, which provides libblas.so and
liblapack.so virtual package.

Could you add the dependency to alternatives?
Attached patch fixes this trivially.

Best regards,
- -- 
Ryo IGARASHI, Ph.D.
rigar...@gmail.com

- -- System Information:
Debian Release: jessie/sid
  APT prefers oldstable-updates
  APT policy: (500, 'oldstable-updates'), (500, 'unstable'), (500, 'stable'), 
(500, 'oldstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 3.14-2-amd64 (SMP w/3 CPU cores)
Locale: LANG=ja_JP.UTF-8, LC_CTYPE=ja_JP.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libarpack2-dev depends on:
ii  libarpack2 3.1.5-3
ii  libblas-dev1.2.20110419-7
ii  liblapack-dev  3.5.0-2

libarpack2-dev recommends no packages.

libarpack2-dev suggests no packages.

- -- no debconf information

-BEGIN PGP SIGNATURE-
Version: GnuPG v1
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=Vbap
-END PGP SIGNATURE-
--- debian/control.old	2014-08-06 12:14:21.398226000 +0900
+++ debian/control	2014-08-06 13:31:04.158226000 +0900
@@ -50,7 +50,7 @@
 Section: libdevel
 Priority: extra
 Architecture: any
-Depends:  libarpack2 (= ${binary:Version}), libblas-dev, liblapack-dev,
+Depends:  libarpack2 (= ${binary:Version}), libblas-dev | libblas.so, liblapack-dev | liblapack.so,
  ${misc:Depends}
 Replaces: arpack2-dev
 Conflicts: arpack2-dev
--- End Message ---
--- Begin Message ---
Source: arpack
Source-Version: 3.5.0+real-1

We believe that the bug you reported is fixed in the latest version of
arpack, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 757...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sébastien Villemot  (supplier of updated arpack package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 14 Sep 2017 12:16:59 +0200
Source: arpack
Binary: libarpack2 libarpack2-dev libparpack2 libparpack2-dev
Architecture: source
Version: 3.5.0+real-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Sébastien Villemot 
Description:
 libarpack2 - Fortran77 subroutines to solve large scale eigenvalue problems
 libarpack2-dev - Fortran77 subroutines to solve large scale eigenvalue 
problems (d
 libparpack2 - Parallel subroutines to solve large scale eigenvalue problems
 libparpack2-dev - Parallel subroutines to solve large scale eigenvalue 
problems (de
Closes: 757189 875697
Changes:
 arpack (3.5.0+real-1) unstable; urgency=medium
 .
   * Team upload.
   * Really upload 3.5.0 upstream release. (Closes: #875697)

arpack_3.5.0+real-1_source.changes ACCEPTED into unstable

2017-09-14 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 14 Sep 2017 12:16:59 +0200
Source: arpack
Binary: libarpack2 libarpack2-dev libparpack2 libparpack2-dev
Architecture: source
Version: 3.5.0+real-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Sébastien Villemot 
Description:
 libarpack2 - Fortran77 subroutines to solve large scale eigenvalue problems
 libarpack2-dev - Fortran77 subroutines to solve large scale eigenvalue 
problems (d
 libparpack2 - Parallel subroutines to solve large scale eigenvalue problems
 libparpack2-dev - Parallel subroutines to solve large scale eigenvalue 
problems (de
Closes: 757189 875697
Changes:
 arpack (3.5.0+real-1) unstable; urgency=medium
 .
   * Team upload.
   * Really upload 3.5.0 upstream release. (Closes: #875697)
   * Fix debian/watch file (and upgrade to format version 4).
   * Update symbols file for libparpack2.
   * Bump to debhelper compat level 10.
   * Mark shared and development library packages as Multi-Arch: same.
   * Enforce generic BLAS (to avoid tying to ATLAS or OpenBLAS).
   * Ship arpack.pc in libarpack2-dev.
   * Use canonical URLs for Vcs-* fields.
   * Install doc using dh_installdocs (instead of dh_install).
   * Migrate to -dbgsym debug packages.
   * Bump priority of -dev packages to optional, per policy 4.0.1.
   * Add BLAS/LAPACK virtual -dev packages as alternatives in dependency list of
 ARPACK -dev packages (Closes: #757189)
   * Bump Standards-Version to 4.1.0.
   * Remove obsolete README.source.
   * Remove obsolete source lintian override.
   * Remove obsolete Conflicts+Replaces on arpack2{,-dev}.
Checksums-Sha1:
 070f18834735cdf01a0cca8892511e3d4078e392 2213 arpack_3.5.0+real-1.dsc
 acbbe14b03b323f84236553872396345204dea1e 949853 arpack_3.5.0+real.orig.tar.gz
 4fea9394d6ed2abef029c5cc1a666992ad588e5d 8540 arpack_3.5.0+real-1.debian.tar.xz
 480baea0e99cf194554ac672283b4e68b645f78c 7655 
arpack_3.5.0+real-1_amd64.buildinfo
Checksums-Sha256:
 2f83f6dd468dcd0b27bc4d5747348456bab7ad87bb4b492bd9549cb599d82128 2213 
arpack_3.5.0+real-1.dsc
 50f7a3e3aec2e08e732a487919262238f8504c3ef927246ec3495617dde81239 949853 
arpack_3.5.0+real.orig.tar.gz
 f5624f6c7f3bfeb25fe4ac67dc2cbb0da48db7771e649fa077e0bdfab44e2830 8540 
arpack_3.5.0+real-1.debian.tar.xz
 2ca8abff21cd6aaa0d3de0a7c367af0a018f9c24d8c23d727bfef2f80adaef7e 7655 
arpack_3.5.0+real-1_amd64.buildinfo
Files:
 9729d450619a7cfe8fc4eb36bc89f661 2213 math optional arpack_3.5.0+real-1.dsc
 9762c9ae6d739a9e040f8201b1578874 949853 math optional 
arpack_3.5.0+real.orig.tar.gz
 97df70251b9335729aa0976b32db70c1 8540 math optional 
arpack_3.5.0+real-1.debian.tar.xz
 09287745b2ed9201a2a86b7c10c37e7b 7655 math optional 
arpack_3.5.0+real-1_amd64.buildinfo

-BEGIN PGP SIGNATURE-
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=Ye+M
-END PGP SIGNATURE-


Thank you for your contribution to Debian.

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Processing of arpack_3.5.0+real-1_source.changes

2017-09-14 Thread Debian FTP Masters
arpack_3.5.0+real-1_source.changes uploaded successfully to localhost
along with the files:
  arpack_3.5.0+real-1.dsc
  arpack_3.5.0+real.orig.tar.gz
  arpack_3.5.0+real-1.debian.tar.xz
  arpack_3.5.0+real-1_amd64.buildinfo

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers


Bug#875618: openblas: please enable build on s390x

2017-09-14 Thread Sébastien Villemot
On Wed, Sep 13, 2017 at 08:33:08PM +, PICCA Frederic-Emmanuel wrote:
> Hello 
> 
> > Unfortunately it does not look that simple. OpenBLAS is optimized for z13, 
> > but
> > our s390x port is supposed to support all the z systems (see [1]).
> 
> what about asking for a a z13-support package to the isa-support (source
> package) maintainer. This way it could be possible to upload an optimise
> vesion of openblas which can install on recent enought s390x machines.

I am not totally convinced by this solution. If we adopt it, somebody who
installs e.g. octave on an old system-z machine will be hit by a failure in the
dpkg installation process, which needs manual intervention. This is likely to
generate problems in automated installers (and also confuse and annoy system
admins).

> the question will be then : does the buildd support these instructions ?

I leave that to the s390 porters to answer.

-- 
⢀⣴⠾⠻⢶⣦⠀  Sébastien Villemot
⣾⠁⢠⠒⠀⣿⡁  Debian Developer
⢿⡄⠘⠷⠚⠋⠀  http://sebastien.villemot.name
⠈⠳⣄  http://www.debian.org


signature.asc
Description: PGP signature
-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#875736: glpsol.1 breaks cross building and doesn't tell what glpsol does

2017-09-14 Thread Helmut Grohne
Source: glpk
Version: 4.63-1
User: helm...@debian.org
Usertags: rebootstrap

glpk fails to cross build from source:

| help2man -N -n "large-scale linear and mixed integer programming solver" -o 
debian/tmp/glpsol.1 examples/glpsol
| help2man: can't get `--help' info from examples/glpsol
| Try `--no-discard-stderr' if option outputs to stderr
| debian/rules:10: recipe for target 'override_dh_auto_install' failed
| make[1]: *** [override_dh_auto_install] Error 126
| make[1]: Leaving directory '/<>'
| debian/rules:4: recipe for target 'binary-arch' failed
| make: *** [binary-arch] Error 2
| dpkg-buildpackage: error: fakeroot debian/rules binary-arch gave error exit 
status 2

Running help2man is always a bad idea, because it breaks cross
compilation and the manual page is of dubious value. I looked at the
generated one and couldn't figure out what glpsol is supposed to do.

The attached patch adds a script that extracts the --help output from
the source to avoid running it. While that doesn't improve the quality
of the manual page, it makes glpk cross build.

Please consider applying the attached patch or replacing the manual page
with a useful one. A short discussion on #debian-devel revealed that the
preferred solution is to replace it with a version that says what glpsol
does and directs readers to further documentation (e.g. running glpsol
--help or https://en.wikibooks.org/wiki/GLPK/Using_GLPSOL) rather than
extracting it.

Helmut
diff --minimal -Nru glpk-4.63/debian/changelog glpk-4.63/debian/changelog
--- glpk-4.63/debian/changelog  2017-07-29 10:17:30.0 +0200
+++ glpk-4.63/debian/changelog  2017-09-14 09:29:00.0 +0200
@@ -1,3 +1,10 @@
+glpk (4.63-1.1) UNRELEASED; urgency=medium
+
+  * Non-maintainer upload.
+  * Fix FTCBFS: Don't run help2man on host architecture code. (Closes: #-1)
+
+ -- Helmut Grohne   Thu, 14 Sep 2017 09:29:00 +0200
+
 glpk (4.63-1) unstable; urgency=medium
 
   * New upstream version 4.63
diff --minimal -Nru glpk-4.63/debian/help2man/glpsol 
glpk-4.63/debian/help2man/glpsol
--- glpk-4.63/debian/help2man/glpsol1970-01-01 01:00:00.0 +0100
+++ glpk-4.63/debian/help2man/glpsol2017-09-14 09:29:00.0 +0200
@@ -0,0 +1,12 @@
+#!/bin/sh
+case "$1" in
+   --help)
+   sed '1,/^static void 
print_help/d;/^}/,$d;:a;/xprintf[^)]*[^;]*$/{N;ba};s/\n//;s/^\s*//;/^[^x]/d;s/%s/gplsol/;s/,
 my_name//;s/xprintf("\(.*\)\\n\"\s*)\s*;/\1/;s/"\s*"//;s/\\"/"/g' 
examples/glpsol.c
+   ;;
+   --version)
+   echo "GLPSOL: GLPK LP/MIP Solver, $(dpkg-parsechangelog 
-SVersion | sed 's/-.*//')"
+   ;;
+   *)
+   exit 1
+   ;;
+esac
diff --minimal -Nru glpk-4.63/debian/rules glpk-4.63/debian/rules
--- glpk-4.63/debian/rules  2017-07-28 11:55:22.0 +0200
+++ glpk-4.63/debian/rules  2017-09-14 09:28:58.0 +0200
@@ -8,7 +8,7 @@
 
 override_dh_auto_install:
dh_auto_install
-   help2man -N -n "large-scale linear and mixed integer programming 
solver" -o debian/tmp/glpsol.1 examples/glpsol
+   help2man -N -n "large-scale linear and mixed integer programming 
solver" -o debian/tmp/glpsol.1 debian/help2man/glpsol
 
 override_dh_makeshlibs:
dh_makeshlibs -V
-- 
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers