Processed: Re: Bug#876509: deal.ii FTBFS with lapack

[Debian Bug Tracking System]

Processing control commands:

> reassign -1 src:trilinos 12.10.1-4
Bug #876509 [src:deal.ii] deal.ii FTBFS with lapack
Bug reassigned from package 'src:deal.ii' to 'src:trilinos'.
No longer marked as found in versions deal.ii/8.4.2-2.
Ignoring request to alter fixed versions of bug #876509 to the same values 
previously set
Bug #876509 [src:trilinos] deal.ii FTBFS with lapack
Marked as found in versions trilinos/12.10.1-4.
> affects -1 src:deal.ii
Bug #876509 [src:trilinos] deal.ii FTBFS with lapack
Added indication that 876509 affects src:deal.ii
> block -1 by 876958
Bug #876509 [src:trilinos] deal.ii FTBFS with lapack
876509 was not blocked by any bugs.
876509 was not blocking any bugs.
Added blocking bug(s) of 876509: 876958

-- 
876509: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=876509
Debian Bug Tracking System
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Bug#876509: deal.ii FTBFS with lapack

[Graham Inggs]

Control: reassign -1 src:trilinos 12.10.1-4
Control: affects -1 src:deal.ii
Control: block -1 by 876958

Hi Anton

On 23 September 2017 at 01:23, Anton Gladky  wrote:
> deal.ii FTBFS in the sid. Probably due to the new upload of lapack.

Yes indeed, thanks for picking this up.  Trilinos needs a rebuild, I
have requested a binNMU (#876958)

Regards
Graham

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Bug#876958: nmu: trilinos_12.10.1-4

[Graham Inggs]

Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: binnmu
X-Debbugs-Cc: debian-science-maintainers@lists.alioth.debian.org

Dear Release Team

Lapack recently switched to multiarch and Trilinos needs to be rebuilt
in order to pick up the new locations of liblapack.so and libblas.so.
This causes deal.ii (its only reverse-dependency) to FTBFS (see
#876509).  Please schedule the following binNMU:

nmu trilinos_12.10.1-4 . ANY . -m 'Rebuild against multiarch lapack'

Regards
Graham

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netgen 4.9.13.dfsg-11 MIGRATED to testing

[Debian testing watch]

FYI: The status of the netgen source package
in Debian's testing distribution has changed.

  Previous version: 4.9.13.dfsg-10
  Current version:  4.9.13.dfsg-11

-- 
This email is automatically generated once a day.  As the installation of
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later changes on the next day.
See https://release.debian.org/testing-watch/ for more information.

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sfepy is marked for autoremoval from testing

[Debian testing autoremoval watch]

sfepy 2016.2-2 is marked for autoremoval from testing on 2017-10-03

It is affected by these RC bugs:
872248: sfepy: FTBFS with Sphinx 1.6: Needs build-dep on latexmk

It (build-)depends on packages with these RC bugs:
872314: pytables: FTBFS with Sphinx 1.6: Needs build-dep on latexmk


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Re: 3Depict : upload request, bug #876620

[D Haley]

Dear Sébastien,

I have corrected d/control & d/copyright, as well as updating to compat
10. This has been pushed as f513233d7. gbp import-orig --pristine-tar
has been used to import the upstream tarball, and have also been pushed.

A quick question : Unless I'm mistaken, it seems that VCS-Git and
VCS-Browser are the same (and this is reflected in debian-science
policy). Is there a link to explain why we are duplicate this, so I can
understand this a bit better? I'm assuming its to do with enforcing
https transport?

Thanks for the quick response.

On 25.09.2017 14:52, Sébastien Villemot wrote:
> Dear D Haley,
> 
> On Mon, Sep 25, 2017 at 12:03:28AM +0100, D Haley wrote:
> 
>> I would like to request an upload for the 3Depict package.  The latest
>> changeset (eae0c8c8a05c1) has been pushed to git.debian.org [1].
>>
>> This updates the package to upstream version to 0.0.20, and also fixes a
>> FTBFS bug due to a missing build-dep in sid. The package has been
>> successfully built in cowbuilder.
> 
> Please also update the pristine-tar branch, I can’t recreate the tarball
> without it.
> 
> The following changes should also be made:
> - in d/control: use an https URL for Vcs-Git (instead of git://)
> - in d/copyright: same for the Format field (per policy 4.0.0)
> - upgrading to Debhelper compat level 10 would be nice, though not strictly 
> needed
> 
> Best,
> 

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Bug#876908: Is blcr completely useless?

[Adrian Bunk]

Source: blcr
Version: 0.8.5-2.1
Severity: serious
Tags: buster sid

As far as I can see:
1. blcr is dead upstream since 2013.
2. blcr requires both userspace and kernel parts.
3. The -dkms package is removed in unstable.
4. The beta version in experimental has an RC bug against
   the -dkms package that the module does not build
   with the jessie (sic) kernel.

mpich is linked with the userspace library,
but does that make any sense without the kernel part?

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Bug#876890: scalapack FTBFS on arm64: test failures

[Adrian Bunk]

Source: scalapack
Version: 2.0.2-3
Severity: serious

Some recent change in unstable makes scalapack FTBFS on arm64:

https://tests.reproducible-builds.org/debian/history/scalapack.html
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/scalapack.html

...
The following tests FAILED:
  1 - xCbtest (Failed)
  2 - xFbtest (Failed)
 75 - xssvd (Failed)
 76 - xdsvd (Failed)
 77 - xssep (Failed)
 78 - xdsep (Failed)
 79 - xcsep (Failed)
 80 - xzsep (Failed)
 81 - xsgsep (Failed)
 82 - xdgsep (Failed)
 83 - xcgsep (Failed)
 84 - xzgsep (Failed)
 91 - xssyevr (Failed)
 92 - xdsyevr (Failed)
 93 - xcheevr (Failed)
 94 - xzheevr (Failed)
Errors while running CTest
Makefile:143: recipe for target 'test' failed
make[2]: *** [test] Error 8

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Bug#876870: apertium-en-es FTBFS with apertium 3.4.2~r68466-2: test failure

[Adrian Bunk]

Source: apertium-en-es
Version: 0.8.0~r57502-2
Severity: serious
Tags: buster sid

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/apertium-en-es.html

...
   dh_auto_test -O--fail-missing
make -j1 test VERBOSE=1
make[1]: Entering directory '/build/1st/apertium-en-es-0.8.0~r57502'
echo  "Fue un malentendido."  | apertium -d . es-en | tee .test-mt
It went a misunderstanding.
1c1
< It was a misunderstanding.
---
> It went a misunderstanding.
Makefile:784: recipe for target 'test' failed
make[1]: *** [test] Error 1

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Bug#876745: marked as done (ros-ros-comm: FTBFS on hurd-i386: Unable to generate messages for package 'roscpp')

[Debian Bug Tracking System]

Your message dated Tue, 26 Sep 2017 09:34:39 +
with message-id 
and subject line Bug#876745: fixed in ros-genpy 0.6.6-3
has caused the Debian Bug report #876745,
regarding ros-ros-comm: FTBFS on hurd-i386: Unable to generate messages for 
package 'roscpp'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
876745: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=876745
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: ros-ros-comm
Version: 1.13.2+ds1-2
Severity: important
Tags: upstream
Justification: fails to build from source
User: debian-h...@lists.debian.org

Builds of ros-ros-comm for hurd-i386 (admittedly not a release
architecture) have been failing:

  cd /<>/ros-ros-comm-1.13.2+ds1/obj-i686-gnu/clients/roscpp && 
../../catkin_generated/env_cached.sh /usr/bin/python 
/usr/lib/genpy/genmsg_py.py 
/<>/ros-ros-comm-1.13.2+ds1/clients/roscpp/msg/Logger.msg 
-Iroscpp:/<>/ros-ros-comm-1.13.2+ds1/clients/roscpp/msg -p roscpp -o 
/<>/ros-ros-comm-1.13.2+ds1/obj-i686-gnu/devel/lib/python2.7/dist-packages/roscpp/msg
  Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/genpy/generator.py", line 985, in 
generate_messages
  outfile = self.generate(msg_context, full_type, f, outdir, search_path) 
#actual generation
File "/usr/lib/python2.7/dist-packages/genpy/generator.py", line 958, in 
generate
  os.makedirs(outdir)
File "/usr/lib/python2.7/os.py", line 157, in makedirs
  mkdir(name, mode)
  OSError: [Errno 1073741841] File exists: 
'/<>/ros-ros-comm-1.13.2+ds1/obj-i686-gnu/devel/lib/python2.7/dist-packages/roscpp/msg'
  
  ERROR: Unable to generate messages for package 'roscpp': while processing 
'/<>/ros-ros-comm-1.13.2+ds1/clients/roscpp/msg/Logger.msg': [Errno 
1073741841] File exists: 
'/<>/ros-ros-comm-1.13.2+ds1/obj-i686-gnu/devel/lib/python2.7/dist-packages/roscpp/msg'

Could you please take a look?

Thanks!

-- 
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
--- End Message ---
--- Begin Message ---
Source: ros-genpy
Source-Version: 0.6.6-3

We believe that the bug you reported is fixed in the latest version of
ros-genpy, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 876...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jochen Sprickerhof  (supplier of updated ros-genpy package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Date: Tue, 26 Sep 2017 10:37:27 +0200
Source: ros-genpy
Binary: python-genpy
Architecture: source
Version: 0.6.6-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jochen Sprickerhof 
Description:
 python-genpy - Python Robot OS message and service generators
Closes: 876745
Changes:
 ros-genpy (0.6.6-3) unstable; urgency=medium
 .
   * Add patch for Hurd (Closes: #876745)
   * new standards version (no changes needed)
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Bug#876841: Depends on python3-mock

[Yuri D'Elia]

Package: python3-tables
Version: 3.4.2-1
Severity: normal

Hi, in the newer release of the package, python3-tables is added as a
build dependency, however the package itself depends on python3-mock.

After checking though, it seems that python3-mock is only used in
tests/test_utils.py (the test suite).

Is it necessary dependency?

-- System Information:
Debian Release: buster/sid
 APT prefers unstable
 APT policy: (900, 'unstable'), (800, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.12.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages python3-tables depends on:
ii  python  2.7.14-1
ii  python-tables-data  3.4.2-1
ii  python3 3.5.3-3
ii  python3-mock2.0.0-3
ii  python3-numexpr 2.6.2-2
ii  python3-numpy   1:1.13.1-1
ii  python3-six 1.11.0-1
ii  python3-tables-lib  3.4.2-1

python3-tables recommends no packages.

Versions of packages python3-tables suggests:
pn  python-netcdf  
ii  python-tables-doc  3.4.2-1
pn  vitables   

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ros-genpy_0.6.6-3_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 26 Sep 2017 10:37:27 +0200
Source: ros-genpy
Binary: python-genpy
Architecture: source
Version: 0.6.6-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jochen Sprickerhof 
Description:
 python-genpy - Python Robot OS message and service generators
Closes: 876745
Changes:
 ros-genpy (0.6.6-3) unstable; urgency=medium
 .
   * Add patch for Hurd (Closes: #876745)
   * new standards version (no changes needed)
Checksums-Sha1:
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ros-genpy_0.6.6-3.debian.tar.xz
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ros-genpy_0.6.6-3.debian.tar.xz
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Thank you for your contribution to Debian.

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ros-roscpp-core_0.6.5-2_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 26 Sep 2017 10:46:35 +0200
Source: ros-roscpp-core
Binary: libroscpp-core-dev libcpp-common0d libroscpp-serialization0d 
librostime0d
Architecture: source
Version: 0.6.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jochen Sprickerhof 
Description:
 libcpp-common0d - Robot OS utility library
 libroscpp-core-dev - Development files for Robot OS roscpp-core
 libroscpp-serialization0d - Robot OS library for roscpp serialization
 librostime0d - Robot OS library for time and duration
Changes:
 ros-roscpp-core (0.6.5-2) unstable; urgency=medium
 .
   * Add patch for Hurd
   * new standards version (no changes needed)
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silx_0.5.0+dfsg-2_source.changes ACCEPTED into unstable

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Accepted:

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Format: 1.8
Date: Fri, 01 Sep 2017 15:10:44 +0200
Source: silx
Binary: silx python-silx python-silx-dbg python3-silx python3-silx-dbg 
python-silx-doc
Architecture: source
Version: 0.5.0+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Picca Frédéric-Emmanuel 
Description:
 python-silx - Toolbox for X-Ray data analysis - Python2 library
 python-silx-dbg - Toolbox for X-Ray data analysis - Python2 debug
 python-silx-doc - Toolbox for X-Ray data analysis - Documentation
 python3-silx - Toolbox for X-Ray data analysis - Python3
 python3-silx-dbg - Toolbox for X-Ray data analysis - Python3 debug
 silx   - Toolbox for X-Ray data analysis - Executables
Changes:
 silx (0.5.0+dfsg-2) unstable; urgency=medium
 .
   * d/control
 - Added all the -dbg dependencies for the -dbg packages.
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ros-genpy_0.6.6-3_source.changes REJECTED

[Debian FTP Masters]

ros-genpy_0.6.6-3.dsc: Invalid size hash for ros-genpy_0.6.6.orig.tar.gz:
According to the control file the size hash should be 51945,
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silx_0.5.0+dfsg-2_source.changes REJECTED

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ros-roscpp-core_0.6.5-2_source.changes REJECTED

[Debian FTP Masters]

ros-roscpp-core_0.6.5-2.dsc: Invalid size hash for 
ros-roscpp-core_0.6.5.orig.tar.gz:
According to the control file the size hash should be 34491,
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plplot_5.13.0+dfsg-5_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 26 Sep 2017 09:33:42 +0200
Source: plplot
Binary: libplplot15 libplplot-dev libplplotcxx13 libplplotfortran0 
libplplot-java libcsironn0 libcsirocsa0 libqsastime0 libqsastime-dev 
plplot-driver-xwin plplot-driver-wxwidgets libplplotwxwidgets1 plplot-tcl 
plplot-tcl-bin plplot-tcl-dev plplot-driver-cairo plplot-driver-qt libplplotqt2 
python-plplot python-plplot-qt python3-plplot python3-plplot-qt octave-plplot 
libplplotada2 libplplot-ada-dev plplot-doc libplplot-ocaml libplplot-ocaml-dev 
libplplot-lua
Architecture: source
Version: 5.13.0+dfsg-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Ole Streicher 
Description:
 libcsirocsa0 - Scientific plotting library (CSIRO csa library)
 libcsironn0 - Scientific plotting library (CSIRO nn library)
 libplplot-ada-dev - Ada support for PLplot, a plotting library (development 
files)
 libplplot-dev - Scientific plotting library (development files)
 libplplot-java - Scientific plotting library (Java bindings)
 libplplot-lua - Scientific plotting library (Lua bindings)
 libplplot-ocaml - OCaml bindings for the scientific plotting library
 libplplot-ocaml-dev - OCaml support for the PLplot plotting library 
(development files)
 libplplot15 - Scientific plotting library
 libplplotada2 - Ada support for PLplot, a plotting library
 libplplotcxx13 - Scientific plotting library (C++ binding)
 libplplotfortran0 - Scientific plotting library (fortran bindings)
 libplplotqt2 - Scientific plotting library (Qt bindings)
 libplplotwxwidgets1 - Scientific plotting library (wxWidgets bindings)
 libqsastime-dev - Time format conversion library (development files)
 libqsastime0 - Time format conversion library
 octave-plplot - Octave support for PLplot, a plotting library
 plplot-doc - Documentation for PLplot, a plotting library
 plplot-driver-cairo - Scientific plotting library (Cairo driver)
 plplot-driver-qt - Scientific plotting library (Qt driver)
 plplot-driver-wxwidgets - Scientific plotting library (wxWidgets driver)
 plplot-driver-xwin - Scientific plotting library (X11 driver)
 plplot-tcl - Tcl/Tk support for PLplot, a plotting library
 plplot-tcl-bin - Tcl/Tk tools for PLplot, a plotting library
 plplot-tcl-dev - Tcl/Tk development support for PLplot, a plotting library
 python-plplot - Python 2 support for PLplot, a plotting library
 python-plplot-qt - Scientific plotting library (Python 2 Qt GUI)
 python3-plplot - Python 3 support for PLplot, a plotting library
 python3-plplot-qt - Scientific plotting library (Python 3 Qt GUI)
Changes:
 plplot (5.13.0+dfsg-5) unstable; urgency=medium
 .
   * Convert old symlink to directory in libplplot-dev
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Files:
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Processing of ros-roscpp-core_0.6.5-2_source.changes

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Processed: reassign 876745 to ros-genpy, affects 876745

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> reassign 876745 ros-genpy
Bug #876745 [ros-genpy] ros-ros-comm: FTBFS on hurd-i386: Unable to generate 
messages for package 'roscpp'
Ignoring request to reassign bug #876745 to the same package
> affects 876745 src:ros-ros-comm
Bug #876745 [ros-genpy] ros-ros-comm: FTBFS on hurd-i386: Unable to generate 
messages for package 'roscpp'
Ignoring request to set affects of bug 876745 to the same value previously set
> thanks
Stopping processing here.

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Processed: reassign 876745 to ros-genpy, affects 876745

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> reassign 876745 ros-genpy
Bug #876745 [src:ros-ros-comm] ros-ros-comm: FTBFS on hurd-i386: Unable to 
generate messages for package 'roscpp'
Bug reassigned from package 'src:ros-ros-comm' to 'ros-genpy'.
No longer marked as found in versions ros-ros-comm/1.13.2+ds1-2.
Ignoring request to alter fixed versions of bug #876745 to the same values 
previously set
> affects 876745 src:ros-ros-comm
Bug #876745 [ros-genpy] ros-ros-comm: FTBFS on hurd-i386: Unable to generate 
messages for package 'roscpp'
Added indication that 876745 affects src:ros-ros-comm
> thanks
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Processed: Version tracking fix

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> fixed 875911 5.13.0+dfsg-5
Bug #875911 {Done: Ole Streicher } [libqsastime-dev] 
libqsastime-dev: unhandled symlink to directory conversion: 
/usr/share/doc/PACKAGE
There is no source info for the package 'libqsastime-dev' at version 
'5.13.0+dfsg-5' with architecture ''
Unable to make a source version for version '5.13.0+dfsg-5'
Marked as fixed in versions 5.13.0+dfsg-5.
> thanks
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Bug#873512: Fixed upstream

[Andreas Tille]

Hi,

there should be a fix available upstream.  I know that there is some
current work on statsmodels ongoing - thus here only the hint to the
fix.  If nobody will pickup soon I'll probably upload only this fix.

Kind regards

Andreas.

- Forwarded message from Kevin Sheppard  -

Date: Tue, 26 Sep 2017 00:15:39 -0700
From: Kevin Sheppard 
To: statsmodels/statsmodels 
Cc: Andreas Tille , Comment 
Subject: Re: [statsmodels/statsmodels] BUG/TST statespace pickling error in 
statsmodels 0.8 (#3892)

https://github.com/statsmodels/statsmodels/commit/f81cde31421288e669e859d0e798d843ca2ecabe


On Tue, 26 Sep 2017 at 08:11, Andreas Tille 
wrote:

> Hi Kevin,
> On Tue, Sep 26, 2017 at 06:58:30AM +, Kevin Sheppard wrote:
> > It is fixed in Master and will be fixed in 0.9.
> Cool. Could you point to the actual commit which would enable us to
> backport the fix more easily?
> Thanks a lot, Andreas.
>
> --
> http://fam-tille.de
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> ,
> or mute the thread
> 
> .
>


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Bug#875911: libqsastime-dev: unhandled symlink to directory conversion: /usr/share/doc/PACKAGE

[Ole Streicher]

Hi Mo,

On 26.09.2017 09:23, Mo Jun wrote:
> It seems that this problem also exists in libplplot-dev package.

Thank you for the follow-up. I just uploaded 5.13.0+dfsg-5, which fixes
this.

Best regards

Ole

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Bug#874362: marked as done (python-tables: >3.3.0 version of PyTables would be great)

[Debian Bug Tracking System]

Your message dated Tue, 26 Sep 2017 07:36:37 +
with message-id 
and subject line Bug#874362: fixed in pytables 3.4.2-1
has caused the Debian Bug report #874362,
regarding python-tables: >3.3.0 version of PyTables would be great
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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--- Begin Message ---
Package: python-tables
Version: 3.3.0-5
Severity: wishlist

Dear Maintainer,

I am running into https://github.com/PyTables/PyTables/issues/598 which is
fixed in PyTables 3.4.x. However, at present even sid offers only 3.3.0.

The workaround of installing with "pip" instead works fine.

Cheers,

Mark


-- System Information:
Debian Release: 9.1
  APT prefers stable
  APT policy: (600, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 4.9.0-3-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8), 
LANGUAGE=en_US.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: sysvinit (via /sbin/init)

Versions of packages python-tables depends on:
ii  python  2.7.13-2
ii  python-numexpr  2.6.1-4
ii  python-numpy1:1.12.1-3
ii  python-six  1.10.0-3
ii  python-tables-data  3.3.0-5
ii  python-tables-lib   3.3.0-5

python-tables recommends no packages.

Versions of packages python-tables suggests:
pn  python-netcdf  
pn  python-tables-doc  
pn  vitables   

-- no debconf information
--- End Message ---
--- Begin Message ---
Source: pytables
Source-Version: 3.4.2-1

We believe that the bug you reported is fixed in the latest version of
pytables, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 874...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Antonio Valentino  (supplier of updated pytables 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 23 Sep 2017 11:56:40 +
Source: pytables
Binary: python-tables python-tables-lib python-tables-dbg python3-tables 
python3-tables-lib python3-tables-dbg python-tables-doc python-tables-data
Architecture: source all amd64
Version: 3.4.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Antonio Valentino 
Description:
 python-tables - hierarchical database for Python based on HDF5
 python-tables-data - hierarchical database for Python based on HDF5 - test data
 python-tables-dbg - hierarchical database for Python based on HDF5 (debug 
extension)
 python-tables-doc - hierarchical database for Python based on HDF5 - 
documentation
 python-tables-lib - hierarchical database for Python based on HDF5 (extension)
 python3-tables - hierarchical database for Python3 based on HDF5
 python3-tables-dbg - hierarchical database for Python 3 based on HDF5 (debug 
extension
 python3-tables-lib - hierarchical database for Python3 based on HDF5 
(extension)
Closes: 864395 872314 874362
Changes:
 pytables (3.4.2-1) unstable; urgency=medium
 .
   * New upstream release (Closes: #874362)
   * Standard version bumped to v4.1.0 (no change)
   * Ensure that autopkgtest scripts return the correct exit code
 (Closes: #864395)
   * debian/patches:
 - drop 0003-Do-not-fetch-icons-for-external-web-sites.patch,
   0004-fix-compatibility-with-HDF5-1.10.patch,
   0005-Ignore-cpuinfo-on-unsupported-archs.patch and
   0006-allow-for-long-type-in-nextafter: applied upstream
 - refresh remainimg patches
 - new 0003-use-local-mathjax.patch
 - new 0004-unicode-charecter-for-latexpdf.patch
 - new 0005-usepackage-threeparttable.patch (compatibility
   with sphinx >= 1.6)
   * Updated copyright file
   * debian/control
 - add build dependency from python(3)-sphinx-rtd-theme,
   python(3)-ipython, python(3)-numpydoc and python-mock
 - add dependency from libjs-mathjax and python(3)-mock
 - depend on python3-sphinx instead of pyhton-sphinx
 - build-depend on latexmk that is required 

Bug#872314: marked as done (pytables: FTBFS with Sphinx 1.6: Needs build-dep on latexmk)

[Debian Bug Tracking System]

Your message dated Tue, 26 Sep 2017 07:36:37 +
with message-id 
and subject line Bug#872314: fixed in pytables 3.4.2-1
has caused the Debian Bug report #872314,
regarding pytables: FTBFS with Sphinx 1.6: Needs build-dep on latexmk
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
872314: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=872314
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pytables
Version: 3.3.0-5
Severity: important
User: python-modules-t...@lists.alioth.debian.org
Usertags: sphinx1.6

Dear maintainer,

pytables fails to build with Sphinx 1.6, currently available in experimental:

  /usr/bin/make -C build/latex all-pdf
  make[3]: Entering directory '/build/pytables-3.3.0/doc/build/latex'
  latexmk -pdf -dvi- -ps-  'usersguide-3.3.0.tex'
  make[3]: latexmk: Command not found
  Makefile:33: recipe for target 'usersguide-3.3.0.pdf' failed
  make[3]: *** [usersguide-3.3.0.pdf] Error 127

Since Sphinx 1.6, latexmk is required to build the LaTeX documentation [1].
Adding a build-dependency on latexmk should help.

[1]: https://github.com/sphinx-doc/sphinx/pull/3082

--
Dmitry Shachnev


signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: pytables
Source-Version: 3.4.2-1

We believe that the bug you reported is fixed in the latest version of
pytables, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 872...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Antonio Valentino  (supplier of updated pytables 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 23 Sep 2017 11:56:40 +
Source: pytables
Binary: python-tables python-tables-lib python-tables-dbg python3-tables 
python3-tables-lib python3-tables-dbg python-tables-doc python-tables-data
Architecture: source all amd64
Version: 3.4.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Antonio Valentino 
Description:
 python-tables - hierarchical database for Python based on HDF5
 python-tables-data - hierarchical database for Python based on HDF5 - test data
 python-tables-dbg - hierarchical database for Python based on HDF5 (debug 
extension)
 python-tables-doc - hierarchical database for Python based on HDF5 - 
documentation
 python-tables-lib - hierarchical database for Python based on HDF5 (extension)
 python3-tables - hierarchical database for Python3 based on HDF5
 python3-tables-dbg - hierarchical database for Python 3 based on HDF5 (debug 
extension
 python3-tables-lib - hierarchical database for Python3 based on HDF5 
(extension)
Closes: 864395 872314 874362
Changes:
 pytables (3.4.2-1) unstable; urgency=medium
 .
   * New upstream release (Closes: #874362)
   * Standard version bumped to v4.1.0 (no change)
   * Ensure that autopkgtest scripts return the correct exit code
 (Closes: #864395)
   * debian/patches:
 - drop 0003-Do-not-fetch-icons-for-external-web-sites.patch,
   0004-fix-compatibility-with-HDF5-1.10.patch,
   0005-Ignore-cpuinfo-on-unsupported-archs.patch and
   0006-allow-for-long-type-in-nextafter: applied upstream
 - refresh remainimg patches
 - new 0003-use-local-mathjax.patch
 - new 0004-unicode-charecter-for-latexpdf.patch
 - new 0005-usepackage-threeparttable.patch (compatibility
   with sphinx >= 1.6)
   * Updated copyright file
   * debian/control
 - add build dependency from python(3)-sphinx-rtd-theme,
   python(3)-ipython, python(3)-numpydoc and python-mock
 - add dependency from libjs-mathjax and python(3)-mock
 - depend on python3-sphinx instead of pyhton-sphinx
 - build-depend on latexmk that is required bt sphinx >= 1.6
   (Closes: #872314)
 - remove un-necessary "Testsuite: autopkgtest"
   * Install scripts (and related manpages) for the python3 version
 of the package
   * debian/rules
 - no longer use dpkg-parsechangelog to determine the current
   package timestamp
 

Bug#864395: marked as done (pytables: autopkgtests do not fail even if tests fail)

[Debian Bug Tracking System]

Your message dated Tue, 26 Sep 2017 07:36:37 +
with message-id 
and subject line Bug#864395: fixed in pytables 3.4.2-1
has caused the Debian Bug report #864395,
regarding pytables: autopkgtests do not fail even if tests fail
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
864395: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=864395
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pytables
Severity: important
Tags: patch

Dear Maintainer,

It turns out that the tables.test function the autopkgtest call returns the
exit code and does not exit with it. Simple patch attached.

Cheers,
mwh

-- System Information:
Debian Release: stretch/sid
  APT prefers xenial-updates
  APT policy: (500, 'xenial-updates'), (500, 'xenial'), (400, 
'xenial-proposed'), (100, 'xenial-backports')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.4.0-78-generic (SMP w/4 CPU cores)
Locale: LANG=en_NZ.UTF-8, LC_CTYPE=en_NZ.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
diff --git a/debian/tests/python2 b/debian/tests/python2
index 56c0d1a..42f6674 100755
--- a/debian/tests/python2
+++ b/debian/tests/python2
@@ -8,5 +8,5 @@ cd "$ADTTMP"
 
 for py in $PYS; do
 echo "=== $py ==="
-$py -c "import $TESTPKG; $TESTPKG.test(verbose=2)" 2>&1
+$py -c "import $TESTPKG, sys; sys.exit($TESTPKG.test(verbose=2))" 2>&1
 done
diff --git a/debian/tests/python2-dbg b/debian/tests/python2-dbg
index 1df3f6a..f7adb1d 100755
--- a/debian/tests/python2-dbg
+++ b/debian/tests/python2-dbg
@@ -8,5 +8,5 @@ cd "$ADTTMP"
 
 for py in $PYS; do
 echo "=== $py ==="
-$py-dbg -c "import $TESTPKG; $TESTPKG.test(verbose=2)" 2>&1
+$py-dbg -c "import $TESTPKG, sys; sys.exit($TESTPKG.test(verbose=2))" 2>&1
 done
diff --git a/debian/tests/python3 b/debian/tests/python3
index 13187cc..10531d3 100755
--- a/debian/tests/python3
+++ b/debian/tests/python3
@@ -8,5 +8,5 @@ cd "$ADTTMP"
 
 for py in $PYS; do
 echo "=== $py ==="
-$py -c "import $TESTPKG; $TESTPKG.test(verbose=2)" 2>&1
+$py -c "import $TESTPKG, sys; sys.exit($TESTPKG.test(verbose=2))" 2>&1
 done
diff --git a/debian/tests/python3-dbg b/debian/tests/python3-dbg
index 122cc3c..a13c00f 100755
--- a/debian/tests/python3-dbg
+++ b/debian/tests/python3-dbg
@@ -8,5 +8,5 @@ cd "$ADTTMP"
 
 for py in $PYS; do
 echo "=== $py ==="
-$py-dbg -c "import $TESTPKG; $TESTPKG.test(verbose=2)" 2>&1
+$py-dbg -c "import $TESTPKG, sys; sys.exit($TESTPKG.test(verbose=2))" 2>&1
 done
--- End Message ---
--- Begin Message ---
Source: pytables
Source-Version: 3.4.2-1

We believe that the bug you reported is fixed in the latest version of
pytables, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 864...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Antonio Valentino  (supplier of updated pytables 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 23 Sep 2017 11:56:40 +
Source: pytables
Binary: python-tables python-tables-lib python-tables-dbg python3-tables 
python3-tables-lib python3-tables-dbg python-tables-doc python-tables-data
Architecture: source all amd64
Version: 3.4.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Antonio Valentino 
Description:
 python-tables - hierarchical database for Python based on HDF5
 python-tables-data - hierarchical database for Python based on HDF5 - test data
 python-tables-dbg - hierarchical database for Python based on HDF5 (debug 
extension)
 python-tables-doc - hierarchical database for Python based on HDF5 - 
documentation
 python-tables-lib - hierarchical database for Python based on HDF5 (extension)
 python3-tables - hierarchical database for Python3 based on HDF5
 python3-tables-dbg - hierarchical database for Python 3 based on HDF5 (debug 
extension
 python3-tables-lib - hierarchical database for Python3 based on HDF5 
(extension)
Closes: 864395 

pytables_3.4.2-1_amd64.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sat, 23 Sep 2017 11:56:40 +
Source: pytables
Binary: python-tables python-tables-lib python-tables-dbg python3-tables 
python3-tables-lib python3-tables-dbg python-tables-doc python-tables-data
Architecture: source all amd64
Version: 3.4.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Antonio Valentino 
Description:
 python-tables - hierarchical database for Python based on HDF5
 python-tables-data - hierarchical database for Python based on HDF5 - test data
 python-tables-dbg - hierarchical database for Python based on HDF5 (debug 
extension)
 python-tables-doc - hierarchical database for Python based on HDF5 - 
documentation
 python-tables-lib - hierarchical database for Python based on HDF5 (extension)
 python3-tables - hierarchical database for Python3 based on HDF5
 python3-tables-dbg - hierarchical database for Python 3 based on HDF5 (debug 
extension
 python3-tables-lib - hierarchical database for Python3 based on HDF5 
(extension)
Closes: 864395 872314 874362
Changes:
 pytables (3.4.2-1) unstable; urgency=medium
 .
   * New upstream release (Closes: #874362)
   * Standard version bumped to v4.1.0 (no change)
   * Ensure that autopkgtest scripts return the correct exit code
 (Closes: #864395)
   * debian/patches:
 - drop 0003-Do-not-fetch-icons-for-external-web-sites.patch,
   0004-fix-compatibility-with-HDF5-1.10.patch,
   0005-Ignore-cpuinfo-on-unsupported-archs.patch and
   0006-allow-for-long-type-in-nextafter: applied upstream
 - refresh remainimg patches
 - new 0003-use-local-mathjax.patch
 - new 0004-unicode-charecter-for-latexpdf.patch
 - new 0005-usepackage-threeparttable.patch (compatibility
   with sphinx >= 1.6)
   * Updated copyright file
   * debian/control
 - add build dependency from python(3)-sphinx-rtd-theme,
   python(3)-ipython, python(3)-numpydoc and python-mock
 - add dependency from libjs-mathjax and python(3)-mock
 - depend on python3-sphinx instead of pyhton-sphinx
 - build-depend on latexmk that is required bt sphinx >= 1.6
   (Closes: #872314)
 - remove un-necessary "Testsuite: autopkgtest"
   * Install scripts (and related manpages) for the python3 version
 of the package
   * debian/rules
 - no longer use dpkg-parsechangelog to determine the current
   package timestamp
 - avoid duplicate files in the doc
 - improve clean target
   * debian/source/lintian-overrides
 - new lintian overrides for library-package-name-for-application
   and application-in-library-section
Checksums-Sha1:
 c6453e68f91066b680984bd33a6cc138bbf6c010 3254 pytables_3.4.2-1.dsc
 2f1c00c7e0b1e0cb14205bf4420d52e525ba867d 4194208 pytables_3.4.2.orig.tar.gz
 ac1ebf20e974d321e5c0a7b49d57f711822e64d8 17600 pytables_3.4.2-1.debian.tar.xz
 0fb73648a815c4c256b78e266f611f0da0249275 14499 pytables_3.4.2-1_amd64.buildinfo
 bb29273442917f151ce7881490ecc1eeceade853 50688 
python-tables-data_3.4.2-1_all.deb
 b64ab1fc792892994b874ef5885c87ab0d25abbe 3034546 
python-tables-dbg_3.4.2-1_amd64.deb
 0ba69b49e7fa3ef0139f180825bccce1a2417bf0 4413658 
python-tables-doc_3.4.2-1_all.deb
 7ca52b313cf3e67aa69a3730791f643a5ea7 413808 
python-tables-lib_3.4.2-1_amd64.deb
 cde515c24577db422a5f81bb8fcd112e06e76c3e 335684 python-tables_3.4.2-1_all.deb
 6bca4cd2bbe882b598945620f7706ee34187f9ca 6428938 
python3-tables-dbg_3.4.2-1_amd64.deb
 50388850f42d3697a0c76b2e4766a51cc1674c6a 640644 
python3-tables-lib_3.4.2-1_amd64.deb
 e63013695e57e912bce22bb2233723be23bd24bb 337724 python3-tables_3.4.2-1_all.deb
Checksums-Sha256:
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pytables_3.4.2-1.dsc
 629a0227bb2b315c5d97629073696609eaee41d0fc89e03f997412613cd46d3a 4194208 
pytables_3.4.2.orig.tar.gz
 e8a7abc986bb539987c379de0c3371d11502a7fc73a707b740ba1286e8f1e65b 17600 
pytables_3.4.2-1.debian.tar.xz
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pytables_3.4.2-1_amd64.buildinfo
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python-tables-data_3.4.2-1_all.deb
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python-tables-doc_3.4.2-1_all.deb
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python-tables-lib_3.4.2-1_amd64.deb
 253359b7294005e0660c3e382223af0ba07d86c891afd2873755516623017605 335684 
python-tables_3.4.2-1_all.deb
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python3-tables-dbg_3.4.2-1_amd64.deb
 f24072142d062d82ecf9dc12cb47c6570e770ce87f32c80a6ff8ba1c5abf2835 640644 
python3-tables-lib_3.4.2-1_amd64.deb
 

Processing of pytables_3.4.2-1_amd64.changes

[Debian FTP Masters]

pytables_3.4.2-1_amd64.changes uploaded successfully to localhost
along with the files:
  pytables_3.4.2-1.dsc
  pytables_3.4.2.orig.tar.gz
  pytables_3.4.2-1.debian.tar.xz
  pytables_3.4.2-1_amd64.buildinfo
  python-tables-data_3.4.2-1_all.deb
  python-tables-dbg_3.4.2-1_amd64.deb
  python-tables-doc_3.4.2-1_all.deb
  python-tables-lib_3.4.2-1_amd64.deb
  python-tables_3.4.2-1_all.deb
  python3-tables-dbg_3.4.2-1_amd64.deb
  python3-tables-lib_3.4.2-1_amd64.deb
  python3-tables_3.4.2-1_all.deb

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

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Bug#875911: libqsastime-dev: unhandled symlink to directory conversion: /usr/share/doc/PACKAGE

[Mo Jun]

Package: libplplot-dev
Version: 5.13.0+dfsg-4
Followup-For: Bug #875911

Dear Maintainer,

It seems that this problem also exists in libplplot-dev package.

Upgrading the libplplot-dev package from 5.10.0+dfsg2-0.4+b3 to
5.13.0+dfsg-4 resulted in that '/usr/share/doc/libplplot12/examples' is
not deleted:

Preparing to unpack .../5-libplplot-dev_5.13.0+dfsg-4_amd64.deb ...
Unpacking libplplot-dev (5.13.0+dfsg-4) over (5.10.0+dfsg2-0.4+b3) ...
dpkg: warning: unable to delete old directory
'/usr/share/doc/libplplot12/examples': Directory not empty

and that '/usr/share/doc/libplplot-dev' is still a symlink:

$ ls -ld /usr/share/doc/libplplot-dev
lrwxrwxrwx 1 root root 11 Feb 17  2016 /usr/share/doc/libplplot-dev ->
libplplot12

and that 'changelog.Debian.gz', 'changelog.gz' and 'copyright' are missing in
/usr/share/doc/libplplot-dev:

$ ls -l /usr/share/doc/libplplot-dev/
total 4
drwxr-xr-x 2 root root 4096 Sep 26 12:32 examples

Regards,
Jun MO

-- System Information:
Debian Release: buster/sid
  APT prefers unstable-debug
  APT policy: (500, 'unstable-debug'), (500, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.12.0-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8),
LANGUAGE=en_US:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages libplplot-dev depends on:
ii  libfreetype6-dev2.8-0.2
ii  libltdl-dev [libltdl3-dev]  2.4.6-2
ii  libplplot15 5.13.0+dfsg-4
ii  libplplotcxx13  5.13.0+dfsg-4
ii  libplplotfortran0   5.13.0+dfsg-4
ii  libplplotqt25.13.0+dfsg-4
ii  libplplotwxwidgets1 5.13.0+dfsg-4
ii  libqhull-dev2015.2-2
ii  libqsastime-dev 5.13.0+dfsg-4
ii  libshp-dev  1.4.1-1

Versions of packages libplplot-dev recommends:
ii  cmake3.9.3-1
pn  libplplot-d  
ii  libplplot-lua5.13.0+dfsg-4
pn  libplplot-ocaml  
ii  pkg-config   0.29-4+b1

Versions of packages libplplot-dev suggests:
pn  plplot-doc  

-- debconf-show failed

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python-pymeasure_0.4.6-1_amd64.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 24 Sep 2017 18:38:10 +0100
Source: python-pymeasure
Binary: python3-pymeasure python-pymeasure-doc
Architecture: source all
Version: 0.4.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python-pymeasure-doc - documentation for PyMeasure
 python3-pymeasure - scientific measurement library for Python
Changes:
 python-pymeasure (0.4.6-1) unstable; urgency=medium
 .
   * New upstream version 0.4.6
   * Drop patch No-pytest-conftest.patch.
 Reason: No longer required
   * Adapt the autopkgtests to the new upstream layout.
 Reason: Upstream moved the test suite outside the Python package, so the
 tests can no longer be launched with --pyargs. Instead, the test suite
 is copied from the source tree to the test bed before running pytest.
   * Add pytest-runner to the build dependencies
   * Drop superfluous nocheck guard for pybuild
   * Add support for the nodoc build option
   * Fixup the Vcs-Browser URI
   * Relax build dependency on pytest
 - New patch No-pytest-runner.patch
 - Drop build dependency on pytest-runner
   * Add support for the nocheck build profile
   * Replace occurrences of findstring with filter
   * Bump the standards version to 4.1.0
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