Bug#852007: But gcc-6 can't build flint on some architectures!
On Fri, Jan 20, 2017 at 22:08:03 +0100, Julien Puydt wrote: > Hi, > > the flint package uses gcc-5 and g++-5 only on mips and mipsel, where the > later compilers just give bad things ; from d/rules : > > # FTBFS on mips and mipsel seems to be caused by a bug in gcc 6, > # see https://gcc.gnu.org/bugzilla/show_bug.cgi?id=78176 > > What can I do here ? > Talk to the mips porters (debian-m...@lists.debian.org) and/or the gcc maintainers (debian-...@lists.debian.org). Also, if you wanted your message to be seen by the submitter, you might want to actually send it to them (it's not clear to whom your question was addressed...) Cheers, Julien -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#833817: kido: FTBFS on non-x86 architectures due to hard-wired compiler flags
Control: severity -1 serious On Tue, Aug 9, 2016 at 00:14:48 +0200, John Paul Adrian Glaubitz wrote: > Source: kido > Version: 0.1.0+dfsg-1 > Severity: important > > Hello! > > Your package fails to build from source on all non-x86 architectures because > the > build system hard-wires the compiler flags to use x86-specific flags like > "-msse2": > -msse2 is also a big no-no on i386, and a no-op on amd64... Cheers, Julien -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#819989: liblrcalc-dev: wrong include syntax in headers
Package: liblrcalc-dev Version: 1.2-1 Severity: important Tags: upstream fixed-upstream patch $ echo '#include ' | cpp # 1 "" # 1 "" # 1 "" # 1 "/usr/include/stdc-predef.h" 1 3 4 # 1 "" 2 # 1 "" # 1 "/usr/include/lrcalc/symfcn.h" 1 3 4 In file included from :1:0: /usr/include/lrcalc/symfcn.h:4:21: fatal error: hashtab.h: No such file or directory compilation terminated. This is fixed upstream in https://bitbucket.org/asbuch/lrcalc/commits/226981a060a209efb5e0c3925b71b341b9ff63a4 Cheers, Julien -- System Information: Debian Release: stretch/sid APT prefers testing APT policy: (900, 'testing'), (500, 'testing-updates'), (500, 'stable-updates'), (500, 'unstable'), (500, 'stable'), (1, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.3.0-1-amd64 (SMP w/4 CPU cores) Locale: LANG=en_US.utf8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) Versions of packages liblrcalc-dev depends on: ii liblrcalc1 1.2-1 liblrcalc-dev recommends no packages. liblrcalc-dev suggests no packages. -- no debconf information -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#816997: gmsh: FTBFS in stretch, build dependencies not in stretch
On Mon, Mar 7, 2016 at 19:23:41 +0100, Anton Gladky wrote: > Hi Santiago, > > thanks for the bug report. AFAIK the unsatisfied build dependencies > can only be a serious bug for the sid. In sid gmsh builds just fine. > Please close this bug. > No, Santiago's right, swig2.0 is replaced by swig, so your build-deps need fixing. I'd have expected the swig maintainer to handle this... Cheers, Julien -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791195: fixed in lttoolbox 3.3.2~r61000-3.1
On Wed, Feb 3, 2016 at 10:46:02 +0100, Tino Didriksen wrote: > On 3 February 2016 at 02:57, Andreas Beckmann <a...@debian.org> wrote: > > > On Thu, 20 Aug 2015 16:00:44 +0000 Julien Cristau <jcris...@debian.org> > > wrote: > > > lttoolbox (3.3.2~r61000-3.1) unstable; urgency=medium > > > . > > >* Non-maintainer upload. > > >* Rename library packages for g++5 ABI transition (closes: 791195). > > > > This change was recently reverted and I'm not convinced that this was a > > good idea. > > > > That was my doing, on the basis that the transition should never have > happened. > > Because I wasn't properly subscribed to this bug (due to using my mail@ > address which procmail can't handle), I never knew the transition was > pushed through against my wishes, until I went to update lttoolbox to a > newer release. > > There are only 2 other packages that depend on lttoolbox: apertium and > apertium-lex-tools, and I maintain those as well. All 3 are part of the > same upstream project, and are updated together if there are breaking > changes. > > And because lttoolbox 3.3 was not even in testing at the time, nothing > outside my control could have built up dependencies on it, and indeed > nothing has. > > The v5 transition was entirely unnecessary for this package, and I very > strongly want it gone. > You haven't given a single good reason to revert the change. Maybe you would have preferred it didn't, but you're coming 6 months late to that party. Cheers, Julien -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#811498: libconsole-bridge0.2v5: ABI bump without package rename
On Tue, Jan 19, 2016 at 18:52:27 +, Jose Luis Rivero wrote: > Package: libconsole-bridge0.2v5 > Followup-For: Bug #811498 > > Hey Jochen: > > Thanks for the report. You are right, I broke the new update. My > intention was not to change package and library name since upstream > did not change the API/ABI (I'm working with them to keep a sane > semantic versioning scheme). I did that for the package but not for > the library, sorry for that. > > I believe that we can workaround on this problem by creating a symlink > from libconsole_bridge.so.0.3 to a new libconsole_bridge.so.0.2. This > way we can respect the upstream release as-it but keep the dependencies > stable in debian which depends on the 0.2 lib. > > Jochen, do you see any problem with this? or do you have a better idea > to solve the situation keeping in mind that there is no ABI/API change > in the new 0.3.0 version? If the ABI is compatible, that seems fine. Note that if the library's SONAME changed, you would need to bump shlibs to the new version since any rebuilt reverse dependency is going to reference the new SONAME. Cheers, Julien -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#806382: opengm: FTBFS on x32: Could NOT find HDF5
Control: severity -1 important On Thu, Nov 26, 2015 at 15:36:44 -0500, Aaron M. Ucko wrote: > Source: opengm > Version: 2.3.6-1 > Severity: serious > Justification: fails to build from source > > The x32 build of opengm failed because it (supposedly) couldn't find > HDF5: > x32 is not a release arch, downgrading. Cheers, Julien signature.asc Description: PGP signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#798601: limereg: FTBFS on mips/mipsel
Source: limereg Version: 1.4.0-1 Severity: serious Justification: fails to build from source (but built successfully in the past) Hi, your package no longer builds on mips and mipsel autobuilders, see https://buildd.debian.org/status/logs.php?pkg=limereg=1.4.0-1%2Bb1=sid Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#798393: FTBFS: build killed after N minutes of inactivity
Source: mathgl Version: 2.3.3-1 Severity: serious Justification: fails to build from source (but built successfully in the past) Your package no longer builds on the buildds, see https://buildd.debian.org/status/logs.php?pkg=mathgl=2.3.3-1=sid Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#798164: vtk: do not ship in stretch
Source: vtk Version: 5.8.0-17.5 Severity: serious Tags: stretch sid The mix of vtk 5.x and vtk 6.x in the archive was bad enough in jessie, we shouldn't ship that again for stretch. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#798174: viper: depends on vtk 5
Source: viper Version: 1.0.0-1 Severity: serious Tags: sid stretch Control: block 798164 with -1 Hi, your package depends on vtk 5.x, which should not be in stretch. Please switch to vtk 6.x or drop the dependency. Thanks, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#797167: linbox: FTBFS on mipsel (FAIL: test-charpoly)
Source: linbox Version: 1.3.2-1.1 Severity: serious Justification: fails to build from source (but built successfully in the past) Tags: stretch sid Hi, your package no longer builds on the mipsel buildd, see https://buildd.debian.org/status/fetch.php?pkg=linboxarch=mipselver=1.3.2-1.1%2Bb2stamp=1440750249 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#796716: urdfdom: library transition needed with GCC 5 as default
Source: urdfdom Version: 0.3.0-1 Tags: sid stretch User: debian-...@lists.debian.org Usertags: libstdc++-cxx11 Hi, your library exposes std::string or std::list in its public API, and therefore the library package needs to be renamed. Cheers, Julien The following is a form letter: Background [1]: libstdc++6 introduces a new ABI to conform to the C++11 standard, but keeps the old ABI to not break existing binaries. Packages which are built with g++-5 are using the new ABI. Libraries built from this source package export some of the new __cxx11 or B5cxx11 symbols, and dropping other symbols. If these symbols are part of the API of the library, then this rebuild with g++-5 will trigger a transition for the library. What is needed: - Rebuild the library using g++/g++-5. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150813/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. - If there are no symbols matching __cxx11 or B5cxx11 in the symbols forming the library API, you should close this issue with a short explanation. - If there are no reverse dependencies, it should be the package maintainers decision if a transition is needed. However this might break software which is not in the Debian archive, and built against these packages. - If a library transition is needed, please prepare for the change. Rename the library package, append v5 to the name of the package (e.g. libfoo2 - libfoo2v5). Such a change can be avoided, if you have a soversion bump and you upload this version instead of the renamed package. Prepare a patch and attach it to this issue (mark this issue with patch), so that it is possible to NMU such a package. We'll probably have more than hundred transitions triggered. Then reassign the issue to release.debian.org and properly tag it as a transition issue, by sending an email to cont...@bugs.debian.org: user release.debian@packages.debian.org usertag this issue + transition block this issue by 790756 reassign this issue release.debian.org - If unsure if a transition is needed, please tag the issue with help to ask for feedback from other Debian developers. The libstdc++6 transition will be a large one, and it will come with a lot of pain. Please help it by preparing the follow-up transitions. [1] https://wiki.debian.org/GCC5#libstdc.2B-.2B-_ABI_transition signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#796715: coinor-osi: library transition needed with GCC 5 as default
Source: coinor-osi Version: 0.106.9-1 Severity: serious Tags: sid stretch User: debian-...@lists.debian.org Usertags: libstdc++-cxx11 Hi, your library exposes std::string or std::list in its public API, and therefore the library package needs to be renamed. Cheers, Julien The following is a form letter: Background [1]: libstdc++6 introduces a new ABI to conform to the C++11 standard, but keeps the old ABI to not break existing binaries. Packages which are built with g++-5. Libraries built from this source package export some of the new __cxx11 or B5cxx11 symbols, and dropping other symbols. If these symbols are part of the API of the library, then this rebuild with g++-5 will trigger a transition for the library. What is needed: - Rebuild the library using g++/g++-5. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150813/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. - If there are no symbols matching __cxx11 or B5cxx11 in the symbols forming the library API, you should close this issue with a short explanation. - If there are no reverse dependencies, it should be the package maintainers decision if a transition is needed. However this might break software which is not in the Debian archive, and built against these packages. - If a library transition is needed, please prepare for the change. Rename the library package, append v5 to the name of the package (e.g. libfoo2 - libfoo2v5). Such a change can be avoided, if you have a soversion bump and you upload this version instead of the renamed package. Prepare a patch and attach it to this issue (mark this issue with patch), so that it is possible to NMU such a package. We'll probably have more than hundred transitions triggered. Then reassign the issue to release.debian.org and properly tag it as a transition issue, by sending an email to cont...@bugs.debian.org: user release.debian@packages.debian.org usertag this issue + transition block this issue by 790756 reassign this issue release.debian.org - If unsure if a transition is needed, please tag the issue with help to ask for feedback from other Debian developers. The libstdc++6 transition will be a large one, and it will come with a lot of pain. Please help it by preparing the follow-up transitions. [1] https://wiki.debian.org/GCC5#libstdc.2B-.2B-_ABI_transition signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791194: nmu diff for logservice 2.7-1.1
Dear maintainer,
I've prepared a NMU for logservice, to deal with the libstdc++ transition,
and will shortly upload it to the 1-day delayed queue. Please find the
debdiff below.
Cheers,
Julien
From 6a273810fd78032d3fb8fafdf31935a68496b459 Mon Sep 17 00:00:00 2001
From: Julien Cristau jcris...@debian.org
Date: Sun, 16 Aug 2015 17:46:18 +0200
Subject: [PATCH] Rename library packages for g++5 ABI transition (closes:
791194).
---
debian/changelog | 7 +++
debian/control | 12
debian/liblogforwarderutils2.install | 1 -
debian/liblogforwarderutils2v5.install | 1 +
debian/liblogservicecomponentbase2.install | 1 -
debian/liblogservicecomponentbase2v5.install | 1 +
6 files changed, 17 insertions(+), 6 deletions(-)
delete mode 100644 debian/liblogforwarderutils2.install
create mode 100644 debian/liblogforwarderutils2v5.install
delete mode 100644 debian/liblogservicecomponentbase2.install
create mode 100644 debian/liblogservicecomponentbase2v5.install
diff --git a/debian/changelog b/debian/changelog
index 609f7b5..323263c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+logservice (2.7-1.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename library packages for g++5 ABI transition (closes: 791194).
+
+ -- Julien Cristau jcris...@debian.org Sun, 16 Aug 2015 17:46:18 +0200
+
logservice (2.7-1) unstable; urgency=low
* Initial release (Closes: #628656)
diff --git a/debian/control b/debian/control
index 1147283..41a809b 100644
--- a/debian/control
+++ b/debian/control
@@ -40,10 +40,12 @@ Description: Logging service for distributed applications
.
The service is named LogCentral.
-Package: liblogservicecomponentbase2
+Package: liblogservicecomponentbase2v5
Section: libs
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
+Conflicts: liblogservicecomponentbase2
+Replaces: liblogservicecomponentbase2
Description: Library for building LogService components
LogService is a logging service for distributed applications.
.
@@ -53,7 +55,7 @@ Description: Library for building LogService components
Package: liblogservicecomponentbase2-dev
Section: libdevel
Architecture: any
-Depends: liblogservicecomponentbase2 (= ${binary:Version}),
+Depends: liblogservicecomponentbase2v5 (= ${binary:Version}),
liblogforwarderutils2-dev (= ${binary:Version}),
${misc:Depends}
Description: liblogservicecomponentbase development files
@@ -84,10 +86,12 @@ Description: liblogservicetool development files
This package contains development libraries and headers to build applications
using libLogServiceTool.
-Package: liblogforwarderutils2
+Package: liblogforwarderutils2v5
Section: libs
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
+Conflicts: liblogforwarderutils2
+Replaces: liblogforwarderutils2
Description: Base library for LogService elements
LogService is a logging service for distributed applications.
.
@@ -98,7 +102,7 @@ Description: Base library for LogService elements
Package: liblogforwarderutils2-dev
Section: libdevel
Architecture: any
-Depends: liblogforwarderutils2 (= ${binary:Version}),
+Depends: liblogforwarderutils2v5 (= ${binary:Version}),
libomniorb4-dev,
${misc:Depends}
Description: liblogforwarderutils development files
diff --git a/debian/liblogforwarderutils2.install
b/debian/liblogforwarderutils2.install
deleted file mode 100644
index 68fad15..000
--- a/debian/liblogforwarderutils2.install
+++ /dev/null
@@ -1 +0,0 @@
-usr/lib/libLogForwarderUtils.so.*
diff --git a/debian/liblogforwarderutils2v5.install
b/debian/liblogforwarderutils2v5.install
new file mode 100644
index 000..68fad15
--- /dev/null
+++ b/debian/liblogforwarderutils2v5.install
@@ -0,0 +1 @@
+usr/lib/libLogForwarderUtils.so.*
diff --git a/debian/liblogservicecomponentbase2.install
b/debian/liblogservicecomponentbase2.install
deleted file mode 100644
index 41b015b..000
--- a/debian/liblogservicecomponentbase2.install
+++ /dev/null
@@ -1 +0,0 @@
-usr/lib/libLogServiceComponentBase.so.*
diff --git a/debian/liblogservicecomponentbase2v5.install
b/debian/liblogservicecomponentbase2v5.install
new file mode 100644
index 000..41b015b
--- /dev/null
+++ b/debian/liblogservicecomponentbase2v5.install
@@ -0,0 +1 @@
+usr/lib/libLogServiceComponentBase.so.*
--
2.5.0
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791001: nmu diff for clhep 2.1.4.1-1.2
Dear maintainer,
I've prepared a NMU for clhep, to deal with the libstdc++ transition,
and will shortly upload it to the 1-day delayed queue. Please find the
debdiff below.
Cheers,
Julien
From d287ea2812f689081253aedb8e6ac29dfe6af397 Mon Sep 17 00:00:00 2001
From: Julien Cristau jcris...@debian.org
Date: Sun, 16 Aug 2015 17:33:27 +0200
Subject: [PATCH] Rename library packages for g++5 ABI transition (closes:
791001).
---
debian/changelog | 7 +++
debian/control | 6 --
debian/libclhep2.1.install | 1 -
debian/libclhep2.1v5.install | 1 +
4 files changed, 12 insertions(+), 3 deletions(-)
delete mode 100644 debian/libclhep2.1.install
create mode 100644 debian/libclhep2.1v5.install
diff --git a/debian/changelog b/debian/changelog
index 1de3786..a9d7eee 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+clhep (2.1.4.1-1.2) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename library packages for g++5 ABI transition (closes: 791001).
+
+ -- Julien Cristau jcris...@debian.org Sun, 16 Aug 2015 17:33:27 +0200
+
clhep (2.1.4.1-1.1) unstable; urgency=medium
* Non-maintainer upload.
diff --git a/debian/control b/debian/control
index 82c00a0..0e10ecf 100644
--- a/debian/control
+++ b/debian/control
@@ -9,11 +9,13 @@ Homepage: http://proj-clhep.web.cern.ch/proj-clhep/
Vcs-Git: git://anonscm.debian.org/debian-science/packages/clhep.git
Vcs-Browser:
http://anonscm.debian.org/gitweb/?p=debian-science/packages/clhep.git;a=summary
-Package: libclhep2.1
+Package: libclhep2.1v5
Architecture: any
Multi-Arch: same
Pre-Depends: ${misc:Pre-Depends}
Depends: ${shlibs:Depends}, ${misc:Depends}
+Conflicts: libclhep2.1
+Replaces: libclhep2.1
Description: CLHEP: A Class Library for High Energy Physics
CLHEP provides a set of HEP-specific foundation and utility classes such
as random generators, physics vectors, geometry and linear algebra.
@@ -23,7 +25,7 @@ Description: CLHEP: A Class Library for High Energy Physics
Package: libclhep-dev
Architecture: any
Section: libdevel
-Depends: libclhep2.1 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends}
+Depends: libclhep2.1v5 (= ${binary:Version}), ${shlibs:Depends},
${misc:Depends}
Suggests: clhep-doc
Description: CLHEP: A Class Library for High Energy Physics - development
CLHEP provides a set of HEP-specific foundation and utility classes such
diff --git a/debian/libclhep2.1.install b/debian/libclhep2.1.install
deleted file mode 100644
index 88b7ef7..000
--- a/debian/libclhep2.1.install
+++ /dev/null
@@ -1 +0,0 @@
-usr/lib/*/libCLHEP.so.*
diff --git a/debian/libclhep2.1v5.install b/debian/libclhep2.1v5.install
new file mode 100644
index 000..88b7ef7
--- /dev/null
+++ b/debian/libclhep2.1v5.install
@@ -0,0 +1 @@
+usr/lib/*/libCLHEP.so.*
--
2.5.0
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791011: nmu diff for console-bridge 0.2.5-2.1
Dear maintainer,
I've prepared a NMU for console-bridge, to deal with the libstdc++ transition,
and will shortly upload it to the 1-day delayed queue. Please find the
debdiff below.
Cheers,
Julien
From 1e1c702b20a415c7360519ffcf44c03c0b089ebc Mon Sep 17 00:00:00 2001
From: Julien Cristau jcris...@debian.org
Date: Sun, 16 Aug 2015 17:33:59 +0200
Subject: [PATCH] Rename library packages for g++5 ABI transition (closes:
791011).
---
debian/changelog | 7 +++
debian/control| 12
debian/libconsole-bridge0.2.install | 1 -
debian/libconsole-bridge0.2v5.install | 1 +
debian/rules | 2 +-
5 files changed, 17 insertions(+), 6 deletions(-)
delete mode 100644 debian/libconsole-bridge0.2.install
create mode 100644 debian/libconsole-bridge0.2v5.install
diff --git a/debian/changelog b/debian/changelog
index 5ffdec6..bf73156 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+console-bridge (0.2.5-2.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename library packages for g++5 ABI transition (closes: 791011).
+
+ -- Julien Cristau jcris...@debian.org Sun, 16 Aug 2015 17:33:59 +0200
+
console-bridge (0.2.5-2) unstable; urgency=low
* Remove symbols support
diff --git a/debian/control b/debian/control
index c3e824a..35ceb70 100644
--- a/debian/control
+++ b/debian/control
@@ -13,11 +13,13 @@ Vcs-Git:
git://anonscm.debian.org/debian-science/packages/console-bridge.git
Homepage: https://github.com/ros/console_bridge
XS-Testsuite: autopkgtest
-Package: libconsole-bridge0.2
+Package: libconsole-bridge0.2v5
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Pre-Depends: ${misc:Pre-Depends}
Multi-Arch: same
+Conflicts: libconsole-bridge0.2
+Replaces: libconsole-bridge0.2
Description: console bridge - library
ROS-independent, pure CMake (i.e. non-catkin and non-rosbuild
package) that provides logging calls that mirror those found in
@@ -30,7 +32,7 @@ Architecture: any
Section: libdevel
Depends: libboost-thread-dev,
libboost-system-dev,
-libconsole-bridge0.2 (= ${binary:Version}),
+libconsole-bridge0.2v5 (= ${binary:Version}),
pkg-config, ${misc:Depends}
Multi-Arch: same
Description: console bridge - development files
@@ -41,12 +43,14 @@ Description: console bridge - development files
This package contains the development files (headers, pkg-config and
CMake files).
-Package: libconsole-bridge0.2-dbg
+Package: libconsole-bridge0.2v5-dbg
Architecture: any
Section: debug
-Depends: libconsole-bridge0.2 (= ${binary:Version}),
+Depends: libconsole-bridge0.2v5 (= ${binary:Version}),
${misc:Depends}
Multi-Arch: same
+Conflicts: libconsole-bridge0.2-dbg
+Replaces: libconsole-bridge0.2-dbg
Description: console bridge - debugging symbols
ROS-independent, pure CMake (i.e. non-catkin and non-rosbuild
package) that provides logging calls that mirror those found in
diff --git a/debian/libconsole-bridge0.2.install
b/debian/libconsole-bridge0.2.install
deleted file mode 100644
index 3de3b10..000
--- a/debian/libconsole-bridge0.2.install
+++ /dev/null
@@ -1 +0,0 @@
-usr/lib/*/*.so.*
diff --git a/debian/libconsole-bridge0.2v5.install
b/debian/libconsole-bridge0.2v5.install
new file mode 100644
index 000..3de3b10
--- /dev/null
+++ b/debian/libconsole-bridge0.2v5.install
@@ -0,0 +1 @@
+usr/lib/*/*.so.*
diff --git a/debian/rules b/debian/rules
index 928ebc0..aec1817 100755
--- a/debian/rules
+++ b/debian/rules
@@ -12,4 +12,4 @@ override_dh_auto_clean:
dh_auto_clean --
override_dh_strip:
- dh_strip -a --dbg-package=libconsole-bridge0.2-dbg
+ dh_strip -a --dbg-package=libconsole-bridge0.2v5-dbg
--
2.5.0
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791049: nmu diff for givaro 3.7.2-1.1
Dear maintainer,
I've prepared a NMU for givaro, to deal with the libstdc++ transition,
and will shortly upload it to the 1-day delayed queue. Please find the
debdiff below.
Cheers,
Julien
From a648b2e8c00e4a3b5069b239196a1539b5c80347 Mon Sep 17 00:00:00 2001
From: Julien Cristau jcris...@debian.org
Date: Sun, 16 Aug 2015 17:35:10 +0200
Subject: [PATCH] Rename library packages for g++5 ABI transition (closes:
791049).
---
debian/changelog| 7 +++
debian/control | 6 --
debian/libgivaro1.install | 1 -
debian/libgivaro1v5.install | 1 +
4 files changed, 12 insertions(+), 3 deletions(-)
delete mode 100644 debian/libgivaro1.install
create mode 100644 debian/libgivaro1v5.install
diff --git a/debian/changelog b/debian/changelog
index afa64c7..c509687 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+givaro (3.7.2-1.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename library packages for g++5 ABI transition (closes: 791049).
+
+ -- Julien Cristau jcris...@debian.org Sun, 16 Aug 2015 17:35:10 +0200
+
givaro (3.7.2-1) unstable; urgency=low
* Upload to sid.
diff --git a/debian/control b/debian/control
index ffec12c..0cf5ad6 100644
--- a/debian/control
+++ b/debian/control
@@ -14,7 +14,7 @@ Vcs-Browser:
http://git.debian.org/?p=debian-science/packages/givaro.git
Package: libgivaro-dev
Section: libdevel
Architecture: any
-Depends: ${misc:Depends}, libgivaro1 (= ${binary:Version}), make
+Depends: ${misc:Depends}, libgivaro1v5 (= ${binary:Version}), make
Suggests: libgivaro-doc
Description: arithmetic and algebraic computations - development files
Givaro is a C++ library for arithmetic and algebraic computations.
@@ -34,12 +34,14 @@ Description: arithmetic and algebraic computations -
development files
.
This package contains development files for Givaro.
-Package: libgivaro1
+Package: libgivaro1v5
Section: libs
Multi-arch: same
Pre-Depends: ${misc:Pre-Depends}
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
+Conflicts: libgivaro1
+Replaces: libgivaro1
Description: arithmetic and algebraic computations
Givaro is a C++ library for arithmetic and algebraic computations.
Its main features are implementations of the basic arithmetic of many
diff --git a/debian/libgivaro1.install b/debian/libgivaro1.install
deleted file mode 100644
index 75b6102..000
--- a/debian/libgivaro1.install
+++ /dev/null
@@ -1 +0,0 @@
-debian/tmp/usr/lib/*/libgivaro.so.*
diff --git a/debian/libgivaro1v5.install b/debian/libgivaro1v5.install
new file mode 100644
index 000..75b6102
--- /dev/null
+++ b/debian/libgivaro1v5.install
@@ -0,0 +1 @@
+debian/tmp/usr/lib/*/libgivaro.so.*
--
2.5.0
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791195: nmu diff for lttoolbox 3.3.2~r61000-3.1
Dear maintainer,
I've prepared a NMU for lttoolbox, to deal with the libstdc++ transition,
and will shortly upload it to the 1-day delayed queue. Please find the
debdiff below.
Cheers,
Julien
From 306df7a7190b9d9b452de0d6d1c578efbeb70682 Mon Sep 17 00:00:00 2001
From: Julien Cristau jcris...@debian.org
Date: Sun, 16 Aug 2015 17:46:35 +0200
Subject: [PATCH] Rename library packages for g++5 ABI transition (closes:
791195).
---
debian/changelog | 7 +++
debian/control| 8
debian/liblttoolbox3-3.3-0.install| 1 -
debian/liblttoolbox3-3.3-0.postinst | 8
debian/liblttoolbox3-3.3-0v5.install | 1 +
debian/liblttoolbox3-3.3-0v5.postinst | 8
6 files changed, 20 insertions(+), 13 deletions(-)
delete mode 100644 debian/liblttoolbox3-3.3-0.install
delete mode 100644 debian/liblttoolbox3-3.3-0.postinst
create mode 100644 debian/liblttoolbox3-3.3-0v5.install
create mode 100644 debian/liblttoolbox3-3.3-0v5.postinst
diff --git a/debian/changelog b/debian/changelog
index 2570e69..36511ec 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+lttoolbox (3.3.2~r61000-3.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename library packages for g++5 ABI transition (closes: 791195).
+
+ -- Julien Cristau jcris...@debian.org Sun, 16 Aug 2015 17:46:35 +0200
+
lttoolbox (3.3.2~r61000-3) unstable; urgency=low
* Removed troublesome symbols file.
diff --git a/debian/control b/debian/control
index 529df7a..9bb8b5c 100644
--- a/debian/control
+++ b/debian/control
@@ -28,7 +28,7 @@ Vcs-Browser:
http://anonscm.debian.org/cgit/debian-science/packages/lttoolbox.gi
Package: lttoolbox
Architecture: any
-Depends: liblttoolbox3-3.3-0 (= ${binary:Version}),
+Depends: liblttoolbox3-3.3-0v5 (= ${binary:Version}),
${misc:Depends},
${shlibs:Depends}
Description: Apertium lexical processing modules and tools
@@ -38,14 +38,14 @@ Description: Apertium lexical processing modules and tools
for making morphological analysers and generators for natural language
processing applications.
-Package: liblttoolbox3-3.3-0
+Package: liblttoolbox3-3.3-0v5
Architecture: any
Multi-Arch: same
Pre-Depends: ${misc:Pre-Depends}
Depends: ${misc:Depends}, ${shlibs:Depends}
Provides: liblttoolbox
-Conflicts: liblttoolbox, liblttoolbox3
-Replaces: liblttoolbox, liblttoolbox3
+Conflicts: liblttoolbox3-3.3-0, liblttoolbox, liblttoolbox3
+Replaces: liblttoolbox3-3.3-0, liblttoolbox, liblttoolbox3
Description: Shared library for lttoolbox
The lttoolbox contains the augmented letter transducer tools for natural
language processing used by Apertium, a platform for building rule-based
diff --git a/debian/liblttoolbox3-3.3-0.install
b/debian/liblttoolbox3-3.3-0.install
deleted file mode 100644
index 10e3d24..000
--- a/debian/liblttoolbox3-3.3-0.install
+++ /dev/null
@@ -1 +0,0 @@
-debian/tmp/usr/lib/*/liblttoolbox3-3.3.so.*
diff --git a/debian/liblttoolbox3-3.3-0.postinst
b/debian/liblttoolbox3-3.3-0.postinst
deleted file mode 100644
index 7df96b6..000
--- a/debian/liblttoolbox3-3.3-0.postinst
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/bin/sh
-set -e
-
-#DEBHELPER#
-
-ldconfig
-
-exit 0
diff --git a/debian/liblttoolbox3-3.3-0v5.install
b/debian/liblttoolbox3-3.3-0v5.install
new file mode 100644
index 000..10e3d24
--- /dev/null
+++ b/debian/liblttoolbox3-3.3-0v5.install
@@ -0,0 +1 @@
+debian/tmp/usr/lib/*/liblttoolbox3-3.3.so.*
diff --git a/debian/liblttoolbox3-3.3-0v5.postinst
b/debian/liblttoolbox3-3.3-0v5.postinst
new file mode 100644
index 000..7df96b6
--- /dev/null
+++ b/debian/liblttoolbox3-3.3-0v5.postinst
@@ -0,0 +1,8 @@
+#!/bin/sh
+set -e
+
+#DEBHELPER#
+
+ldconfig
+
+exit 0
--
2.5.0
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791264: qwtplot3d: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:13:56 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. class Plot3D includes a std::list, so AIUI libqwtplot3d-qt4-0 should be renamed. A proposed patch is available from https://launchpad.net/ubuntu/+source/qwtplot3d/0.2.7+svn191-7ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791227: openigtlink: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:13:17 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. openigtlink exposes std::string / std::list through its public API, so libopenigtlink1.10 needs a rename. A proposed patch is available from https://launchpad.net/ubuntu/+source/openigtlink/1.10.5-1ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791195: lttoolbox: library transition may be needed when GCC 5 is the default
On Tue, Aug 11, 2015 at 09:38:30 +0200, Tino Didriksen wrote: On 3 July 2015 at 15:12, Matthias Klose d...@debian.org wrote: - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. - If there are no reverse dependencies, it should be the package maintainers decision if a transition is needed. However this might break software which is not in the Debian archive, and built against these packages. No transition is needed, and as upstream I would really prefer no transition is forced. As upstream why does the binary package name for the library matter to you? Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791011: console-bridge: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:09:27 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. console-bridge does expose the public OutputHandler*::log symbols which involve std::string, and libconsole-bridge0.2 thus needs to be renamed. There's a possible patch at https://launchpad.net/ubuntu/+source/console-bridge/0.2.5-2ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791008: coinutils: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:09:24 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. coinutils exposes a number of things involving std::string e.g. in CoinParam or CoinFileIO (the first two I've checked), so coinor-libcoinutils3 needs to be renamed. A possible patch is available at https://launchpad.net/ubuntu/+source/coinutils/2.9.15-3ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791195: lttoolbox: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:12:43 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. There's a number of std::string and std::wstring references in lttoolbox's public symbols; liblttoolbox3-3.3-0 should be renamed. You may want to check out the patch at https://launchpad.net/ubuntu/+source/lttoolbox/3.3.2~r61000-3ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#790977: alglib: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:08:50 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. The rebuild with new libstdc++ causes a lot of renamed symbols, so libalglib3.9 needs to be renamed. A possible patch is available at https://launchpad.net/ubuntu/+source/alglib/3.9.0-2ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#790984: blitz++: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:08:58 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. blitz::Timer::ivar_ gets renamed as part of the rebuild. While that looks like a private variable, it seems to be accessed by inlined methods, so I think that means libblitz0ldbl needs a rename. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791301: ticcutils: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:14:39 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. A number of public symbols reference std::string, so libticcutils2 needs to be renamed. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791251: pynac: library transition may be needed when GCC 5 is the default
On Fri, Jul 3, 2015 at 13:13:42 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. I confirmed that some public symbols change due to the use of std::list or std::string, so libpynac0 needs to be renamed. There is a possible patch at https://launchpad.net/ubuntu/+source/pynac/0.3.7-1ubuntu1 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791209: muparser: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:12:58 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. Some public symbols change, so libmuparser2 needs to be renamed. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791248: psurface: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:13:39 +, Matthias Klose wrote: - Rebuild the library using g++/g++-5 from experimental. Note that most likely all C++ libraries within the build dependencies need a rebuild too. You can find the log for a rebuild in https://people.debian.org/~doko/logs/gcc5-20150701/ Search for BEGIN GCC CXX11 in the log. - Decide if the symbols matching __cxx11 or B5cxx11 are part of the library API, and are used by the reverse dependencies of the library. I confirmed that some public symbols change with the rebuild, so libpsurface0 needs to be renamed. https://launchpad.net/ubuntu/+source/psurface/2.0.0-1ubuntu1 has a patch which may help. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#791130: libitpp: library transition may be needed when GCC 5 is the default
Control: severity -1 serious Control: tag -1 confirmed On Fri, Jul 3, 2015 at 13:11:34 +, Matthias Klose wrote: Package: src:libitpp Version: 4.3.1-3 Severity: important Tags: sid stretch User: debian-...@lists.debian.org Usertags: libstdc++-cxx11 Background [1]: libstdc++6 introduces a new ABI to conform to the C++11 standard, but keeps the old ABI to not break existing binaries. Packages which are built with g++-5 from experimental (not the one from testing/unstable) are using the new ABI. Libraries built from this source package export some of the new __cxx11 or B5cxx11 symbols, and dropping other symbols. If these symbols are part of the API of the library, then this rebuild with g++-5 will trigger a transition for the library. See e.g. https://buildd.debian.org/status/fetch.php?pkg=aghermannarch=amd64ver=1.0.5-1%2Bb1stamp=1438793511 Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#784269: eigen3: unlimited make -j
Source: eigen3 Version: 3.2.2-3 Severity: grave Control: found -1 3.2.4-1 Your debian/rules does export NUMJOBS = $(patsubst parallel=%,%,$(filter parallel=%,$(DEB_BUILD_OPTIONS))) and then runs make -j$(NUMJOBS). If DEB_BUILD_OPTIONS is not set, or doesn't contain a parallelism setting, this results in unlimited parallelism instead of the expected -j1, pretty much killing the build host. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#783797: paraview-dev: can't build plugins, cmake file broken
Package: paraview-dev
Version: 4.1.0+dfsg+1-1
Severity: grave
PARAVIEW_USE_FILE is broken, references programs that don't exist:
$ cd $(mktemp -d)
$ cat CMakeLists.txt
PROJECT(test)
CMAKE_MINIMUM_REQUIRED(VERSION 2.8)
FIND_PACKAGE(ParaView REQUIRED)
INCLUDE(${PARAVIEW_USE_FILE})
$ cmake .
-- The C compiler identification is GNU 4.9.2
-- The CXX compiler identification is GNU 4.9.2
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
CMake Error at /usr/lib/cmake/paraview/ParaViewTargets.cmake:3271 (message):
The imported target vtkParseOGLExt references the file
/usr/bin/vtkParseOGLExt
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
/usr/lib/cmake/paraview/ParaViewTargets.cmake
but not all the files it references.
Call Stack (most recent call first):
/usr/lib/cmake/paraview/ParaViewConfig.cmake:36 (include)
CMakeLists.txt:3 (FIND_PACKAGE)
-- Configuring incomplete, errors occurred!
See also /tmp/tmp.3sj8jzy6s1/CMakeFiles/CMakeOutput.log.
-- System Information:
Debian Release: 8.0
APT prefers stable-updates
APT policy: (990, 'stable-updates'), (990, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 3.16.0-4-amd64 (SMP w/2 CPU cores)
Locale: LANG=C, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages paraview-dev depends on:
ii libc6 2.19-18
ii libeigen3-dev 3.2.2-3
ii paraview 4.1.0+dfsg+1-1
ii qt4-dev-tools 4:4.8.6+git64-g5dc8b2b+dfsg-3
Versions of packages paraview-dev recommends:
ii qt4-dev-tools 4:4.8.6+git64-g5dc8b2b+dfsg-3
paraview-dev suggests no packages.
-- no debconf information
--
Julien Cristau julien.cris...@logilab.fr
Logilab http://www.logilab.fr/
Informatique scientifique gestion de connaissances
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#754310: netgen: meshing a STEP file makes X crash
On Wed, Jul 9, 2014 at 21:51:33 +0200, Francesco Poli (wintermute) wrote: Package: netgen Version: 4.9.13.dfsg-8+b1 Severity: grave Justification: renders package unusable Hello, I cannot generate a mesh on a geometry described in a STEP file without experiencing X crashes that force me to reboot the machine. X crashes are X bugs, not client bugs. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#750197: Please run the vtk test suite
On Mon, Jun 2, 2014 at 15:53:05 +0200, Anton Gladky wrote: severity 750197 important thanks Please do not set such high severity for all bugs. VTK6 has a autopkgtest, which I find not a bad replacement. autopkgtest is very much not a replacement for build-time tests. (not arguing about the severity though) Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#748552: vtk6: FTBFS on powerpc and kfreebsd
Source: vtk6
Version: 6.1.0+dfsg-1
Severity: serious
Justification: fails to build from source
Hi,
your package no longer builds on the powerpc and kfreebsd buildds:
[ 1%] Building CXX object
Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/SystemInformation.cxx.o
cd /«BUILDDIR»/vtk6-6.1.0+dfsg/debian/build/Utilities/KWSys/vtksys
/usr/bin/c++ -DKWSYS_NAMESPACE=vtksys -DVTK_IN_VTK -Dvtksys_EXPORTS
-DKWSYS_BUILD_SHARED=1 -DKWSYS_CXX_HAS_ATOL=1 -DKWSYS_CXX_HAS_ATOLL=1
-DKWSYS_CXX_HAS_RLIMIT64=1 -DKWSYS_SYSTEMINFORMATION_HAS_BACKTRACE=1
-DKWSYS_SYSTEMINFORMATION_HAS_CPP_DEMANGLE=1
-DKWSYS_SYSTEMINFORMATION_HAS_DEBUG_BUILD=1
-DKWSYS_SYSTEMINFORMATION_HAS_SYMBOL_LOOKUP=1 -DKWSYS_SYS_HAS_IFADDRS_H=1
-DKWSYS_USE_LONG_LONG=1 -DSIZEOF_VOID_P=8 -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -Wno-deprecated -O2 -g -DNDEBUG -Wnon-virtual-dtor
-Wno-long-long -ansi -Wcast-align -Wchar-subscripts -Wall -Wextra
-Wpointer-arith -Wformat-security -Woverloaded-virtual -Wshadow
-Wunused-parameter -fno-check-new -fno-common -fPIC
-I/«BUILDDIR»/vtk6-6.1.0+dfsg/debian/build/Utilities/KWSys
-I/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys-o
CMakeFiles/vtksys.dir/SystemInformation.cxx.o -c
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx: In
member function 'std::string
vtksys::{anonymous}::SymbolProperties::Demangle(const char*) const':
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:1469:5:
error: 'abi' has not been declared
abi::__cxa_demangle(symbol, buffer, bufferLen, status);
^
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx: In
member function 'void
vtksys::{anonymous}::SymbolProperties::Initialize(void*)':
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:1487:3:
error: 'Dl_info' was not declared in this scope
Dl_info info;
^
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:1487:11:
error: expected ';' before 'info'
Dl_info info;
^
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:1488:34:
error: 'info' was not declared in this scope
int ierr=dladdr(this-Address,info);
^
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:1488:38:
error: 'dladdr' was not declared in this scope
int ierr=dladdr(this-Address,info);
^
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx: In
static member function 'static std::string
vtksys::SystemInformationImplementation::GetProgramStack(int, int)':
/«BUILDDIR»/vtk6-6.1.0+dfsg/Utilities/KWSys/vtksys/SystemInformation.cxx:3640:41:
error: 'backtrace' was not declared in this scope
int nFrames=backtrace(stackSymbols,256);
^
Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/build.make:333: recipe for
target 'Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/SystemInformation.cxx.o'
failed
make[4]: ***
[Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/SystemInformation.cxx.o] Error 1
make[4]: Leaving directory '/«BUILDDIR»/vtk6-6.1.0+dfsg/debian/build'
CMakeFiles/Makefile2:333: recipe for target
'Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/all' failed
make[3]: *** [Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/all] Error 2
See the full build logs at
https://buildd.debian.org/status/package.php?p=vtk6
Cheers,
Julien
signature.asc
Description: Digital signature
--
debian-science-maintainers mailing list
debian-science-maintainers@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#741196: libpetsc3.4.2: libpetsc.so.3.4.2 links with both GPL-licensed and GPL-incompatible libraries
Control: severity -1 important Control: tags -1 moreinfo On Wed, May 14, 2014 at 00:41:10 +0200, Francesco Poli wrote: On Tue, 13 May 2014 18:48:34 +0200 Julien Cristau wrote: On Tue, May 13, 2014 at 18:34:35 +0200, Francesco Poli wrote: [...] As already said in the original bug report, please see the almost identical bug #740463 for some further details about the SCOTCH licensing issues. I hope this clarifies. From what I understand CeCILL-C is intended to be more permissive than plain CeCILL, which itself is explicitly GPL-compatible. So not really. Regardless of what the license is *intended* to be, CeCILL-C in fact includes restrictions not present in the GNU GPL and has no explicit conversion-to-GPL clause, unlike the CeCILL license. As a consequence, CeCILL-C really appears to be GPL-incompatible, unfortunately... Anyway, thanks for following up on this bug report of mine. And thanks for any help you may provide to fix the issue! Since I disagree, I'd like you to get that confirmed in an authoritative statement from ftpmaster. In the meantime, I'll downgrade this bug. Cheers, Julien -- Julien Cristau julien.cris...@logilab.fr Logilab http://www.logilab.fr/ Informatique scientifique gestion de connaissances -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#741196: libpetsc3.4.2: libpetsc.so.3.4.2 links with both GPL-licensed and GPL-incompatible libraries
Control: tags -1 moreinfo On Sun, Mar 9, 2014 at 22:26:06 +0100, Francesco Poli (wintermute) wrote: = libptscotch-5.1.so and libptscotcherr-5.1.so, which are released under the GPL-incompatible terms of the CeCILL-C v1.0 license Do you have a reference for this claimed incompatibility? Cheers, Julien -- Julien Cristau julien.cris...@logilab.fr Logilab http://www.logilab.fr/ Informatique scientifique gestion de connaissances -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#741196: libpetsc3.4.2: libpetsc.so.3.4.2 links with both GPL-licensed and GPL-incompatible libraries
On Tue, May 13, 2014 at 18:34:35 +0200, Francesco Poli wrote: Control: tags -1 - moreinfo On Tue, 13 May 2014 11:37:17 +0200 Julien Cristau wrote: [...] On Sun, Mar 9, 2014 at 22:26:06 +0100, Francesco Poli (wintermute) wrote: = libptscotch-5.1.so and libptscotcherr-5.1.so, which are released under the GPL-incompatible terms of the CeCILL-C v1.0 license Do you have a reference for this claimed incompatibility? As already said in the original bug report, please see the almost identical bug #740463 for some further details about the SCOTCH licensing issues. I hope this clarifies. From what I understand CeCILL-C is intended to be more permissive than plain CeCILL, which itself is explicitly GPL-compatible. So not really. Cheers, Julien -- Julien Cristau julien.cris...@logilab.fr Logilab http://www.logilab.fr/ Informatique scientifique gestion de connaissances -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#747393: fixed in sdformat 2.0.0-3
Control: reopen -1 On Sun, May 11, 2014 at 21:23:54 +, Jose Luis Rivero wrote: sdformat (2.0.0-3) unstable; urgency=medium . * [f03ab47] Conflict with libsdformat1. (Closes: #747393) This is not an appropriate fix. See policy §8.2: If your package contains files whose names do not change with each change in the library shared object version, you must not put them in the shared library package. Otherwise, several versions of the shared library cannot be installed at the same time without filename clashes, making upgrades and transitions unnecessarily difficult. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#745233: libhogweed2: should have versioned depend on newer libgmp10
On Thu, Apr 24, 2014 at 21:24:17 +0200, Magnus Holmgren wrote: tisdagen den 22 april 2014 22.12.24 skrev Steve M. Robbins: I think I understand the rationale for using the super-fine-grained symbol versioning. If someone from the debian-science-maintainers team would like to maintain this file, please go ahead and commit it to the repository. Unfortunately, I don't have the time to audit each release; so if left to me, I will use the easy and conservative dh_makeshlibs -V solution. Once the symbols file is in place, maintaining it shouldn't require very much effort. As I explained, dpkg-gensymbols, which is run by dh_makeshlibs, tells you about any symbol changes when you build the package. You merely have to apply the generated diff to the symbols file and adjust the minium required version appropriately, making the procedure more automated compared to manually checking when the dependencies have to change. Running simply dh_makeshlibs -V should be avoided as will result in unnecessarily tight dependencies and therefore may delay testing transitioning. More importantly, a symbols file lets you detect when symbols go away. dh_makeshlibs -V doesn't do that. Cheers, Julien signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#743490: libopenblas-base: crashes on init in a kvm guest
Package: libopenblas-base Version: 0.1.1-6+deb7u2 Severity: important Tags: upstream When installing this package on a kvm guest, 'python -c import numpy' crashes with: GotoBLAS : Architecture Initialization failed. No initialization function found. /proc/cpuinfo: processor : 0 vendor_id : GenuineIntel cpu family : 6 model : 2 model name : QEMU Virtual CPU version 1.1.2 stepping: 3 microcode : 0x1 cpu MHz : 2493.774 cache size : 4096 KB fpu : yes fpu_exception : yes cpuid level : 4 wp : yes flags : fpu de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pse36 clflush mmx fxsr sse sse2 syscall nx lm up rep_good nopl pni cx16 hypervisor lahf_lm bogomips: 4987.54 clflush size: 64 cache_alignment : 64 address sizes : 40 bits physical, 48 bits virtual power management: https://github.com/xianyi/OpenBLAS/issues/318 looks related. Cheers, Julien -- Julien Cristau julien.cris...@logilab.fr Logilab http://www.logilab.fr/ Informatique scientifique gestion de connaissances -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
