Bug#993285: ITP: xilinx-bootgen -- boot image converter for Xilinx ARM SoCs

2021-08-29 Thread Nobuhiro Iwamatsu
Package: wnpp
Severity: wishlist
Owner: Nobuhiro Iwamatsu 
X-Debbugs-Cc: debian-de...@lists.debian.org

* Package name: xilinx-bootgen
  Version : 2021.1
  Upstream Author : Xilinx Inc
* URL : https://github.com/Xilinx/bootgen.git
* License : Apache-2.0
  Programming Lang: C++
  Description : boot image converter for Xilinx ARM SoCs

  xilinx-bootgen provides tools to generate a boot image (BOOT.BIN)
  for Xilinx ARM SoC (Zynq-7000, Zynq UltraScale + MPSoC, etc) devices.
  This also provides features such as boot authentication and OpenSSL-based
  encryption.



Bug#836368: marked as done (ITA: pev -- text-based tool to analyze PE files)

2021-08-29 Thread Debian Bug Tracking System
Your message dated Mon, 30 Aug 2021 02:23:07 +
with message-id 
and subject line Bug#836368: fixed in pev 0.81-5
has caused the Debian Bug report #836368,
regarding ITA: pev -- text-based tool to analyze PE files
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
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immediately.)


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--- Begin Message ---

Package: wnpp
Severity: normal
X-Debbugs-CC: Niels Thykier 

The maintainer of the pev have not done an upload since 2011 and the
email address bounces.  Because of this, I orphan his only package, pev.

Cc to his sponsor Niels.

-- 
Happy hacking
Petter Reinholdtsen
--- End Message ---
--- Begin Message ---
Source: pev
Source-Version: 0.81-5
Done: David da Silva Polverari 

We believe that the bug you reported is fixed in the latest version of
pev, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 836...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
David da Silva Polverari  (supplier of updated pev 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Wed, 25 Aug 2021 05:51:44 +
Source: pev
Architecture: source
Version: 0.81-5
Distribution: unstable
Urgency: medium
Maintainer: David da Silva Polverari 
Changed-By: David da Silva Polverari 
Closes: 836368
Changes:
 pev (0.81-5) unstable; urgency=medium
 .
   * New maintainer. (Closes: #836368)
   * Ran wrap-and-sort.
   * Using new DH level format. Consequently:
   - debian/compat: removed.
   - debian/control: changed from 'debhelper' to 'debhelper-compat' in
 Build-Depends field and bumped level to 13.
   * debian/copyright:
   - Added missing 'Files:' and 'License:' blocks.
   - Added missing packaging rights.
   - Updated existing copyright and license information.
   * debian/gbp.conf: set debian/master as debian-branch.
   * debian/lintian-overrides: created to override two lintians.
   * debian/patches/:
   - 0002-makefile-hardening.patch: added to fix upstream Makefile to allow
 for dpkg-buildflags based hardening.
   - 0003-makefile-reproducible.patch: added to make the build reproducible.
   * debian/rules:
   - Added the DEB_BUILD_MAINT_OPTIONS variable to improve GCC hardening.
   - Included /usr/share/dpkg/buildtools.mk to set CC properly for
 cross-compilation and exported CC for usage by make.
   * debian/salsa-ci.yml: added to provide CI tests for Salsa.
   * debian/upstream/metadata: created.
   * debian/watch:
   - Bumped to version 4.
   - Using the @ANY_VERSION@ variable instead of version matching regex.
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Processed: ITP: virify -- finds viruses in metagenomic and metatranscriptomic data

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> owner 993273 Steffen Moeller 
Bug #993273 [wnpp] ITP: virify -- finds viruses in metagenomic and 
metatranscriptomic data
Owner recorded as Steffen Moeller .
>
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Bug#993273: ITP: virify -- finds viruses in metagenomic and metatranscriptomic data

2021-08-29 Thread Steffen Moeller
Package: wnpp
Severity: wishlist

Subject: ITP: virify -- finds viruses in metagenomic and metatranscriptomic data
Package: wnpp
Owner: Steffen Moeller 
Severity: wishlist

* Package name: virify
  Version : 0.3.0
  Upstream Author : Martín Beracochea 
* URL : https://github.com/EBI-Metagenomics/emg-viral-pipeline
* License : Apache-2.0
  Programming Lang: Python
  Description : finds viruses in metagenomic and metatranscriptomic data
 This pipeline is run when there is an interest in finding viruses in
 a sample but one does not really know what to look for. The sequences
 provides all RNA sequences or all DNA sequences that it could find,
 likely somehow helped biochemically to increase chances to find the
 viral DNA/RNA, not the host's DNA/RNA, but any such enrichment is
 not ultimately required. Just sequence more, aka "deeper". Once this
 analysis is run, one will likely define PCR tests for the virus(es)
 identified.
 .
 VIRify is a recently developed pipeline for the detection, annotation,
 and taxonomic classification of viral contigs in metagenomic and
 metatranscriptomic assemblies. The pipeline is part of the repertoire of
 analysis services offered by the European Bioinformatics Institute.
 .
 VIRify’s taxonomic classification
 relies on the detection of taxon-specific profile hidden Markov models
 (HMMs), built upon a set of 22,014 orthologous protein domains and
 referred to as ViPhOGs.
 ,
 The pipeline is implemented and available in CWL and Nextflow.

Remark: This package is maintained by Steffen Moeller at
   https://salsa.debian.org/med-team/virify


Bug#940427: RFA: golang-github-syncthing-notify

2021-08-29 Thread Aloïs Micard
> Hi, I'm interested in helping out the Debian Go team and considering
> this is something I use constantly, I would definitely be willing to
> help maintain it.

Hi Jai, are you still interested in maintaining this package?
If so and need a sponsor feel free to ping me. Otherwise
I would be interested in becoming the maintainer.

Cheers,

-- 
Aloïs Micard 

GPG: DA4A A436 9BFA E299 67CD E85B F733 E871 0859 FCD2



Bug#993271: RFA: ninka -- license identification tool for source code

2021-08-29 Thread Luca Falavigna
Package: wnpp
Severity: normal

I request an adopter for the ninka package.

The package description is:
 Ninka is a lightweight license identification tool for source code. It is
 sentence-based, and provides a simple way to identify open source licenses in
 a source code file. It is capable of identifying several dozen different
 licenses (and their variations).
 .
 Ninka has been designed to be lightweight, fast and accurate.
 .
 This package contains the standard ninka application.



Processed: ITP: mashmap -- mapping whole genomes or long reads (PacBio/ONT) to reference

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> owner 993268 Steffen Moeller 
Bug #993268 [wnpp] ITP: mashmap -- mapping whole genomes or long reads 
(PacBio/ONT) to reference
Owner recorded as Steffen Moeller .
>
End of message, stopping processing here.

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Bug#993268: ITP: mashmap -- mapping whole genomes or long reads (PacBio/ONT) to reference

2021-08-29 Thread Steffen Moeller
Package: wnpp
Severity: wishlist

Subject: ITP: mashmap -- mapping whole genomes or long reads (PacBio/ONT) to 
reference
Package: wnpp
Owner: Steffen Moeller 
Severity: wishlist

* Package name: mashmap
  Version : 2.0
  Upstream Author : Copyright:  
* URL : https://github.com/marbl/MashMap
* License : PD
  Programming Lang: C
  Description : mapping whole genomes or long reads (PacBio/ONT) to 
reference
 MashMap implements a fast and approximate algorithm for computing local
 alignment boundaries between long DNA sequences. It can be useful
 for mapping genome assembly or long reads (PacBio/ONT) to reference
 genome(s). Given a minimum alignment length and an identity threshold
 for the desired local alignments, Mashmap computes alignment boundaries
 and identity estimates using k-mers. It does not compute the alignments
 explicitly, but rather estimates a k-mer based Jaccard similarity using
 a combination of Minimizers and MinHash. This is then converted to an
 estimate of sequence identity using the Mash distance. An appropriate
 k-mer sampling rate is automatically determined using the given minimum
 local alignment length and identity thresholds. The efficiency of the
 algorithm improves as both of these thresholds are increased.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/mashmap



Processed: ITP: virsorter2 -- classifier to detect DNA and RNA virus genomes

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> owner 993267 Steffen Moeller 
Bug #993267 [wnpp] ITP: virsorter2 -- classifier to detect DNA and RNA virus 
genomes
Owner recorded as Steffen Moeller .
>
End of message, stopping processing here.

Please contact me if you need assistance.
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Bug#993267: ITP: virsorter2 -- classifier to detect DNA and RNA virus genomes

2021-08-29 Thread Steffen Moeller
Package: wnpp
Severity: wishlist

Subject: ITP: virsorter2 -- classifier to detect DNA and RNA virus genomes
Package: wnpp
Owner: Steffen Moeller 
Severity: wishlist

* Package name: virsorter2
  Version : 2.2.3
  Upstream Author : Jiarong Guo 
* URL : https://github.com/jiarong/VirSorter2
* License : GPL-2.0
  Programming Lang: Python
  Description : classifier to detect DNA and RNA virus genomes
 VirSorter is a customizable pipeline to identify viral sequences from
 (meta)genomic data.

Remark: This package is maintained by Steffen Moeller at
   https://salsa.debian.org/med-team/virsorter2



Bug#907830: marked as done (O: hsetroot -- tool for composing root-pixmaps for X11)

2021-08-29 Thread Debian Bug Tracking System
Your message dated Sun, 29 Aug 2021 16:33:41 +
with message-id 
and subject line Bug#907830: fixed in hsetroot 1.0.5-1
has caused the Debian Bug report #907830,
regarding O: hsetroot -- tool for composing root-pixmaps for X11
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
907830: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=907830
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: normal

I intend to orphan the hsetroot package since I don't use thi myself anymore.

You can find the sources on salsa:
https://salsa.debian.org/debian/hsetroot

The package description is:
 hsetroot is a tool which allows you to compose wallpapers ("root pixmaps")
 for X. It has a lot of options like rendering gradients, solids, images but
 it also allows you to perform manipulations on those things, or chain them
 together.


signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: hsetroot
Source-Version: 1.0.5-1
Done: Vincent Bernat 

We believe that the bug you reported is fixed in the latest version of
hsetroot, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 907...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Vincent Bernat  (supplier of updated hsetroot package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Sun, 29 Aug 2021 18:10:15 +0200
Source: hsetroot
Architecture: source
Version: 1.0.5-1
Distribution: unstable
Urgency: medium
Maintainer: Vincent Bernat 
Changed-By: Vincent Bernat 
Closes: 907830 982936
Changes:
 hsetroot (1.0.5-1) unstable; urgency=medium
 .
   * New upstream release (Closes: #982936)
   * d/control: fix homepage and update debian/watch
   * d/gbp: introduce a debian/gbp.conf file to match repository layout
   * d/patches: remove all patches, applied upstream
   * d/control: put myself as a maintainer (Closes: #907830)
   * d/control: build-depends on libxinerama-dev
   * d/hsetroot.1: document new options
   * d/patches: fix atom name used when clearing previous wallpaper
   * d/rules: don't try to auto install
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Bug#964785: I'd like to create a shutter package and add it to the Debian package.

2021-08-29 Thread Michael Kogan
Am So., 29. Aug. 2021 um 13:51 Uhr schrieb Andrej Shadura :

> Thanks very much for your offer, but at the moment the only thing blocking
> it is me uploading the package :) The extra dependency is now in Debian, so
> I can proceed with uploading Shutter too before I go on my holiday.
>
> --
> Cheers,
>   Andrej
>

That's great news, thanks for the update!


Bug#951374: RFP: gh -- the GitHub CLI

2021-08-29 Thread Anthony Fok
Hi Brian,

Sorry for the late reply.

On Mon, Aug 16, 2021 at 10:56 PM Brian Thompson  wrote:
> On Mon, 2021-08-16 at 21:27 -0600, Anthony Fok wrote:
> >
> > Now, you might run into a problem when actually trying to name the
> > package "github-cli" (or even "gh") because dh-make-golang 0.4.0 does
> > not allow for overriding the package name.  For example:
> >
> > dh-make-golang -type p -pristine-tar github.com/cli/cli
> >
> > would name the package "cli"... I am working on packaging the latest
> > dh-make-golang and will try to add a flag to allow overriding the
> > package name, to be uploaded as dh-make-golang 0.4.1 or 0.5.0.
>
> It sounds like this functionality is required for what we are trying to 
> achieve.
> I am not very familiar with the golang family and its surrounding 
> infrastructure
> regarding Debian. Perhaps I am not best-equipped to package the github-cli 
> tool,
> but I am always willing to learn.

That's awesome!  Welcome to the Debian Go Packaging Team!
You may start by taking a look at  https://go-team.pages.debian.net/ .

I am happy to report that dh-make-golang 0.5.0-1 has been uploaded,
which means now you can name the package "gh" (to match the name of
the Debian package provided upstream on GitHub) by using the following
command:

dh-make-golang -pristine-tar -program_package_name gh github.com/cli/cli

(the -pristine-tar option is just my personal preference and is optional.)

> > Then there are the yet-to-be-packaged dependencies.  Just so that you
> > know, the following packages that github-cli depends on have already
> > been packaged but currently sitting in the
> > https://ftp-master.debian.org/new.html NEW queue:
> >
> >  * golang-github-yuin-goldmark-emoji 1.0.1-1
> >  * golang-github-muesli-reflow 0.3.0-1
> >  * golang-github-shurcool-graphql 0.0~git20200928.18c5c31-1
> >  * golang-github-shurcool-githubv4 0.0~git20210725.83ba7b4-1

Hurray!  These 4 packages have entered Debian!  (Thanks to FTP Masters!)

> > I'll report back here if I were to package and upload more of these
> > dependencies so as to avoid duplication of work.

> It sounds like we should pause the github-cli technical packaging work until
> dependent features and packages are added to the ecosystem. Would you agree 
> with
> that? I'm not seeing any BTS tags specific to RFPs (or bugs in general) for
> marking it as "blocked", as we would say in the corporate world. Although I am
> not sure that is even necessary.

Well, we won't know what the dependencies are until we start packaging
gh, so we would start by running dh-make-golang which will give us
more information such as the yet-to-be-packaged dependencies.

Yes, it would be a good idea to mark the relevant ITP/RFP bugs as
blocking for gh.  Not strictly necessary, but definitely helpful to
have the ITP/RFP bugs connected to this bug, otherwise it is hard to
keep track of them.

So yes, with the new dh-make-golang 0.5.0, you can start packaging gh
and its dependencies any time now!  Make sure to double check the NEW
queue and WNPP to ensure you are not doing work that has already been
done by others.  :-)

Let's begin!

Cheers,
Anthony



Bug#964785: I'd like to create a shutter package and add it to the Debian package.

2021-08-29 Thread Andrej Shadura
Hi,

On Sun, 29 Aug 2021, at 13:49, Michael Kogan wrote:
> Am Fr., 20. Aug. 2021 um 06:52 Uhr schrieb jiho lee :
>> Hi Andrej.
>> 
>> Is there anything else I need to support regarding shutter packaging?
>> 
>> There is a future society, but my future is not what others do.
>> Dept. of Information Science, Graduate School, Korea National Open University
> 
> Anything we can do from upstream to get this moving? We have now up to date 
> packages for Arch/Manjaro, Fedora, Gentoo, so Debian is the by far biggest 
> distro which hasn't packaged Shutter yet...

Thanks very much for your offer, but at the moment the only thing blocking it 
is me uploading the package :) The extra dependency is now in Debian, so I can 
proceed with uploading Shutter too before I go on my holiday.

-- 
Cheers,
  Andrej


Bug#964785: I'd like to create a shutter package and add it to the Debian package.

2021-08-29 Thread Michael Kogan
Am Fr., 20. Aug. 2021 um 06:52 Uhr schrieb jiho lee :

> Hi Andrej.
>
> Is there anything else I need to support regarding shutter packaging?
> 
> 
> There is a future society, but my future is not what others do.
> Dept. of Information Science, Graduate School, Korea National Open
> University
>

Anything we can do from upstream to get this moving? We have now up to date
packages for Arch/Manjaro, Fedora, Gentoo, so Debian is the by far biggest
distro which hasn't packaged Shutter yet...


Processed: yt: tests fail with h5py 3

2021-08-29 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 pending
Bug #993004 [src:yt] yt: tests fail with h5py 3
Added tag(s) pending.
> block -1 by 992999
Bug #993004 [src:yt] yt: tests fail with h5py 3
993004 was not blocked by any bugs.
993004 was not blocking any bugs.
Added blocking bug(s) of 993004: 992999

-- 
993004: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=993004
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: cronie RFA to O

2021-08-29 Thread Debian Bug Tracking System
Processing control commands:

> retitle 974038 O: cronie -- Process Scheduling Daemon
Bug #974038 [wnpp] RFA: cronie -- Process Scheduling Deamon
Changed Bug title to 'O: cronie -- Process Scheduling Daemon' from 'RFA: cronie 
-- Process Scheduling Deamon'.

-- 
974038: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=974038
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#974038: cronie RFA to O

2021-08-29 Thread Christian Kastner
Control: retitle 974038 O: cronie -- Process Scheduling Daemon

I RFA'ed the package nearly two years ago. My hope was to find someone
to guide through a transition from src:cron to src:cronie as the default
job scheduler for Debian.

That did not happen, so unfortunately, it is now time to orphan the package.

As, until recently, also the main maintainer of src:cron (from which I
also stepped down a while ago), I still believe that src:cronie should
replace our src:cron as the default cron daemon.

Note that src:cron itself is in need of a new maintainer, see #984736.



Processed: block 993242 with 993240

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 993242 with 993240
Bug #993242 [wnpp] ITP: golang-github-gambol99-go-marathon -- A GO API library 
for working with Marathon
993242 was not blocked by any bugs.
993242 was not blocking any bugs.
Added blocking bug(s) of 993242: 993240
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
993242: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=993242
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: block 983289 with 993242

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 983289 with 993242
Bug #983289 [wnpp] ITP: traefik -- The Cloud Native Application Proxy
983289 was blocked by: 991675 991766 991751 991637 991658 993240 991760 991763 
991757 991697
983289 was not blocking any bugs.
Added blocking bug(s) of 983289: 993242
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
983289: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983289
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#993242: ITP: golang-github-gambol99-go-marathon -- A GO API library for working with Marathon

2021-08-29 Thread Alois Micard
Package: wnpp
Severity: wishlist
Owner: Aloïs Micard 

* Package name: golang-github-gambol99-go-marathon
  Version : 0.7.1-1
  Upstream Author : Rohith Jayawardene
* URL : https://github.com/gambol99/go-marathon
* License : Apache-2.0
  Programming Lang: Go
  Description : A GO API library for working with Marathon

This library is needed for Traefik.
Cheers,



Processed: block 983289 with 993240

2021-08-29 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 983289 with 993240
Bug #983289 [wnpp] ITP: traefik -- The Cloud Native Application Proxy
983289 was blocked by: 991658 991697 991675 991637 991751 991763 991760 991766 
991757
983289 was not blocking any bugs.
Added blocking bug(s) of 983289: 993240
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
983289: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983289
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#993240: ITP: golang-github-donovanhide-eventsource -- Server Side Events client and server for Go

2021-08-29 Thread Alois Micard
Package: wnpp
Severity: wishlist
Owner: Aloïs Micard 

* Package name: golang-github-donovanhide-eventsource
  Version : 0.0~git20171031.3ed64d2-1
  Upstream Author : Donovan Hide
* URL : https://github.com/donovanhide/eventsource
* License : Apache
  Programming Lang: Go
  Description : Server Side Events client and server for Go

This library is needed for Traefik.



Bug#993237: ITP: svt-av1 -- Scalable Video Technology for AV1

2021-08-29 Thread Dylan Aïssi
Package: wnpp
Severity: wishlist
Owner: Dylan Aïssi 
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-multime...@lists.debian.org

* Package name: svt-av1
  Version: 0.8.7
* URL : https://gitlab.com/AOMediaCodec/SVT-AV1/
* License : BSD-2-clause
  Description: Scalable Video Technology for AV1 (SVT-AV1 Encoder and Decoder)
The Scalable Video Technology for AV1 (SVT-AV1 Encoder and Decoder) is an
AV1-compliant encoder/decoder library core. The SVT-AV1 encoder development
is a work-in-progress targeting performance levels applicable to
both VOD and
Live encoding / transcoding video applications. The SVT-AV1 decoder
implementation is targeting future codec research activities.

Remark: This package is maintained by Debian Multimedia Team at
   https://salsa.debian.org/multimedia-team/svt-av1