Package: wnpp Severity: wishlist Owner: [EMAIL PROTECTED] * Package name : ghmm Upstream Authors : Alexander Schliep Benjamin Georgi Wasinee Rungsarityotin Ivan G. Costa Janne Grunau Matthias Heinig * URL : http://www.ghmm.org * License : LGPL Description : Library with data structures and algorithms for Hidden Markov Models
Hi, I plan to package ghmm. I will include the C library and python bindings to it. There will be one build of the C library against GSL (the GNU Scientific Library which is GPL, thus causing possible license problems with some software) and one build without GSL. These two builds will be ABI compatible. > The General Hidden Markov Model library (GHMM) is a freely available > LGPL-ed C library implementing efficient data structures and > algorithms for basic and extended HMMs. The development is hosted at > Sourceforge http://sourceforge.net/projects/ghmm/, where you have > access to the Subversion repository, mailing lists and forums. > > The GHMM is developed by the Algorithmics group at the Max Planck > Institute for Molecular Genetics. > Features: > * Discrete and continous emissions > * Mixtures of PDFs for continous emissions > * Non-homogenous Markov chains > * Pair HMMs (contributed by Genoscope ) > * Clustering and mixture modelling for HMMs > * Graphical Editor HMMEd > * Python bindings > * XML-based file format > * Portable (autoconf, automake, Windows) > * C++ API (NOT under active development, unsupported Bye
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