[jira] [Updated] (JOSHUA-277) UnsatisfiedLinkError: no ken in java.library.path

2016-06-14 Thread Thamme Gowda (JIRA)

 [ 
https://issues.apache.org/jira/browse/JOSHUA-277?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Thamme Gowda updated JOSHUA-277:

Description: 

I followed this guide http://joshua.incubator.apache.org/6.0/quick-start.html 
to test the latest build.

Assuming there few things are broken due to newer maven build system, I tried 
to fix pipeline.pl to get the quick start guide working.

Which files from kenlm build should I add to JNI path? (I am unable to locate 
the library file in the kenlm build output)

Here is the full log:

{code}
$JOSHUA/bin/pipeline.pl --source bn --target en --type hiero 
--no-prepare --aligner berkeley --corpus input/bn-en/tok/training.bn-en 
--tune input/bn-en/tok/dev.bn-en --test input/bn-en/tok/devtest.bn-en
[train-copy-and-filter] cached, skipping...
[train-vocab-bn] cached, skipping...
[train-vocab-en] cached, skipping...
[tune-copy-and-filter] cached, skipping...
[tune-vocab-bn] cached, skipping...
[tune-vocab-en.0] cached, skipping...
[tune-vocab-en.1] cached, skipping...
[tune-vocab-en.2] cached, skipping...
[tune-vocab-en.3] cached, skipping...
[test-copy-and-filter] cached, skipping...
[test-vocab-bn] cached, skipping...
[test-vocab-en.0] cached, skipping...
[test-vocab-en.1] cached, skipping...
[test-vocab-en.2] cached, skipping...
[test-vocab-en.3] cached, skipping...
[source-numlines] cached, skipping...
[source-numlines] retrieved cached result =>20788
[berkeley-aligner-chunk-0] cached, skipping...
[aligner-combine] cached, skipping...
[pack-grammar] cached, skipping...
[lm-sort-uniq] cached, skipping...
[kenlm] cached, skipping...
[compile-kenlm] cached, skipping...
[glue-tune] cached, skipping...
Error: Could not find or load main class 
joshua.util.encoding.EncoderConfiguration
[tune-bundle] cached, skipping...
[mert-1] rebuilding...
  
dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.bn
 [CHANGED]
  
dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config
 [CHANGED]
  dep=tune/model/grammar.packed/slice_0.source [CHANGED]
  
dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config.final
 [NOT FOUND]
  
cmd=/Users/thammegr/work/projects/apache/incubator-joshua/scripts/training/run_tuner.py
 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.bn
 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.en
 --tunedir 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune --tuner 
mert --decoder 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/decoder_command
 --decoder-config 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config
 --decoder-output-file 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/output.nbest
 --decoder-log-file 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.log
 --iterations 10 --metric 'BLEU 4 closest'
  JOB FAILED (return code 1)
Exception in thread "main" java.lang.RuntimeException: Unable to instantiate 
feature function 'StateMinimizingLanguageModel -lm_order 5 -lm_file 
/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/model/lm.kenlm'!
at 
org.apache.joshua.decoder.Decoder.initializeFeatureFunctions(Decoder.java:761)
at org.apache.joshua.decoder.Decoder.initialize(Decoder.java:514)
at org.apache.joshua.decoder.Decoder.(Decoder.java:122)
at org.apache.joshua.decoder.JoshuaDecoder.main(JoshuaDecoder.java:69)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at 
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at 
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at 
org.apache.joshua.decoder.Decoder.initializeFeatureFunctions(Decoder.java:757)
... 3 more
Caused by: java.lang.ExceptionInInitializerError
at 
org.apache.joshua.decoder.ff.lm.StateMinimizingLanguageModel.initializeLM(StateMinimizingLanguageModel.java:75)
at 
org.apache.joshua.decoder.ff.lm.LanguageModelFF.(LanguageModelFF.java:156)
at 
org.apache.joshua.decoder.ff.lm.StateMinimizingLanguageModel.(StateMinimizingLanguageModel.java:50)
... 8 more
Caused by: java.lang.RuntimeException: java.lang.UnsatisfiedLinkError: no ken 
in java.library.path
at org.apache.joshua.decoder.ff.lm.KenLM.(KenLM.java:52)
... 11 more
Caused by: java.lang.UnsatisfiedLinkError: no ken in java.library.path
at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1867)
at java.lang.Runtime.loadLibrary0(Runtime.java:870)
at 

[jira] [Updated] (JOSHUA-277) UnsatisfiedLinkError: no ken in java.library.path

2016-06-14 Thread Thamme Gowda (JIRA)

 [ 
https://issues.apache.org/jira/browse/JOSHUA-277?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Thamme Gowda updated JOSHUA-277:

Summary: UnsatisfiedLinkError: no ken in java.library.path  (was: Cant find 
ken library )

> UnsatisfiedLinkError: no ken in java.library.path
> -
>
> Key: JOSHUA-277
> URL: https://issues.apache.org/jira/browse/JOSHUA-277
> Project: Joshua
>  Issue Type: Bug
>Reporter: Thamme Gowda
>
> {code}
> $JOSHUA/bin/pipeline.pl --source bn --target en --type hiero 
> --no-prepare --aligner berkeley --corpus input/bn-en/tok/training.bn-en   
>   --tune input/bn-en/tok/dev.bn-en --test input/bn-en/tok/devtest.bn-en
> [train-copy-and-filter] cached, skipping...
> [train-vocab-bn] cached, skipping...
> [train-vocab-en] cached, skipping...
> [tune-copy-and-filter] cached, skipping...
> [tune-vocab-bn] cached, skipping...
> [tune-vocab-en.0] cached, skipping...
> [tune-vocab-en.1] cached, skipping...
> [tune-vocab-en.2] cached, skipping...
> [tune-vocab-en.3] cached, skipping...
> [test-copy-and-filter] cached, skipping...
> [test-vocab-bn] cached, skipping...
> [test-vocab-en.0] cached, skipping...
> [test-vocab-en.1] cached, skipping...
> [test-vocab-en.2] cached, skipping...
> [test-vocab-en.3] cached, skipping...
> [source-numlines] cached, skipping...
> [source-numlines] retrieved cached result =>20788
> [berkeley-aligner-chunk-0] cached, skipping...
> [aligner-combine] cached, skipping...
> [pack-grammar] cached, skipping...
> [lm-sort-uniq] cached, skipping...
> [kenlm] cached, skipping...
> [compile-kenlm] cached, skipping...
> [glue-tune] cached, skipping...
> Error: Could not find or load main class 
> joshua.util.encoding.EncoderConfiguration
> [tune-bundle] cached, skipping...
> [mert-1] rebuilding...
>   
> dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.bn
>  [CHANGED]
>   
> dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config
>  [CHANGED]
>   dep=tune/model/grammar.packed/slice_0.source [CHANGED]
>   
> dep=/Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config.final
>  [NOT FOUND]
>   
> cmd=/Users/thammegr/work/projects/apache/incubator-joshua/scripts/training/run_tuner.py
>  
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.bn
>  
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/data/tune/corpus.en
>  --tunedir 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune --tuner 
> mert --decoder 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/decoder_command
>  --decoder-config 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.config
>  --decoder-output-file 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/output.nbest
>  --decoder-log-file 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/joshua.log
>  --iterations 10 --metric 'BLEU 4 closest'
>   JOB FAILED (return code 1)
> Exception in thread "main" java.lang.RuntimeException: Unable to instantiate 
> feature function 'StateMinimizingLanguageModel -lm_order 5 -lm_file 
> /Users/thammegr/work/projects/apache/incubator-joshua/data/bn-en/tune/model/lm.kenlm'!
>   at 
> org.apache.joshua.decoder.Decoder.initializeFeatureFunctions(Decoder.java:761)
>   at org.apache.joshua.decoder.Decoder.initialize(Decoder.java:514)
>   at org.apache.joshua.decoder.Decoder.(Decoder.java:122)
>   at org.apache.joshua.decoder.JoshuaDecoder.main(JoshuaDecoder.java:69)
> Caused by: java.lang.reflect.InvocationTargetException
>   at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
>   at 
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
>   at 
> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
>   at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
>   at 
> org.apache.joshua.decoder.Decoder.initializeFeatureFunctions(Decoder.java:757)
>   ... 3 more
> Caused by: java.lang.ExceptionInInitializerError
>   at 
> org.apache.joshua.decoder.ff.lm.StateMinimizingLanguageModel.initializeLM(StateMinimizingLanguageModel.java:75)
>   at 
> org.apache.joshua.decoder.ff.lm.LanguageModelFF.(LanguageModelFF.java:156)
>   at 
> org.apache.joshua.decoder.ff.lm.StateMinimizingLanguageModel.(StateMinimizingLanguageModel.java:50)
>   ... 8 more
> Caused by: java.lang.RuntimeException: java.lang.UnsatisfiedLinkError: no ken 
> in java.library.path
>   at org.apache.joshua.decoder.ff.lm.KenLM.(KenLM.java:52)
>   ... 11 more
> Caused by: java.lang.UnsatisfiedLinkError: no ken in java.library.path
>