[GitHub] [incubator-sdap-nexus] RKuttruff commented on a diff in pull request #185: SDAP-399: Quickstart update - Docker

2022-09-30 Thread GitBox 


RKuttruff commented on code in PR #185:
URL: 
https://github.com/apache/incubator-sdap-nexus/pull/185#discussion_r984985448


##
CHANGELOG.md:
##
@@ -41,9 +41,9 @@ and this project adheres to [Semantic 
Versioning](https://semver.org/spec/v2.0.0
 - Fixed issue where satellite to satellite matchups with the same dataset 
don't return the expected result
 - Fixed CSV and NetCDF matchup output bug
 - Fixed NetCDF output switching latitude and longitude
+- SDAP-399: Updated quickstart guide for standalone docker deployment of SDAP.
+- SDAP-399: Updated quickstart Jupyter notebook
 - Fixed import error causing `/timeSeriesSpark` queries to fail.
 - Fixed bug where domsresults no longer worked after successful matchup
 - Fixed certificate error in Dockerfile
-### Security

Review Comment:
   Added a newline after. It no longer shows as deleted



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[GitHub] [incubator-sdap-nexus] RKuttruff commented on a diff in pull request #185: SDAP-399: Quickstart update - Docker

2022-09-30 Thread GitBox 


RKuttruff commented on code in PR #185:
URL: 
https://github.com/apache/incubator-sdap-nexus/pull/185#discussion_r984984394


##
docker/jupyter/Dockerfile:
##
@@ -29,7 +29,8 @@ ENV CHOWN_HOME_OPTS='-R'
 ENV REBUILD_CODE=true
 
 ARG APACHE_NEXUS=https://github.com/apache/incubator-sdap-nexus.git
-ARG APACHE_NEXUS_BRANCH=master
+ARG APACHE_NEXUS_COMMIT=be19c1d567301b09269e851cc5b5af55fea02c5d

Review Comment:
   Updated to point to nexuscli in master branch. Rebuilt & tested image
   `rileykkjpl/jupyter:1.5`



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[GitHub] [incubator-sdap-nexus] RKuttruff commented on a diff in pull request #185: SDAP-399: Quickstart update - Docker

2022-09-30 Thread GitBox 


RKuttruff commented on code in PR #185:
URL: 
https://github.com/apache/incubator-sdap-nexus/pull/185#discussion_r984941752


##
docs/quickstart.rst:
##
@@ -64,181 +80,240 @@ The network we will be using for this quickstart will be 
called ``sdap-net``. Cr
 
 .. _quickstart-step3:
 
-Download Sample Data
--
+Start Ingester Components and Ingest Some Science Data
+
 
-The data we will be downloading is part of the `AVHRR OI dataset 
`_ which 
measures sea surface temperature. We will download 1 month of data and ingest 
it into a local Solr and Cassandra instance.
+Create Data Directory
+
+
+Let's start by creating the directory to hold the science data to ingest.
 
 Choose a location that is mountable by Docker (typically needs to be under the 
User's home directory) to download the data files to.
 
 .. code-block:: bash
 
-  export DATA_DIRECTORY=~/nexus-quickstart/data/avhrr-granules
-  mkdir -p ${DATA_DIRECTORY}
+export DATA_DIRECTORY=~/nexus-quickstart/data/avhrr-granules
+mkdir -p ${DATA_DIRECTORY}
 
-Then go ahead and download 1 month worth of AVHRR netCDF files.
+Now we can start up the data storage components. We will be using Solr and 
Cassandra to store the tile metadata and data respectively.
 
-.. code-block:: bash
+.. _quickstart-step4:
 
-  cd $DATA_DIRECTORY
+Start Zookeeper
+---
 
-  export 
URL_LIST="https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/305/2015110112-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/306/2015110212-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/307/2015110312-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/308/2015110412-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/309/2015110512-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/
 2015/310/2015110612-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/311/2015110712-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/312/2015110812-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/313/2015110912-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/314/2015111012-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/315/201512-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 https://podaac-opendap.jpl.nasa.gov:443
 
/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/316/2015111212-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/317/2015111312-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/318/2015111412-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/319/2015111512-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/320/2015111612-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/321/2015111712-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-G
 LOB-v02.0-fv02.0.nc 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/322/2015111812-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc
 
https://podaac-opendap.jpl.nasa.gov:443/opendap/allData/ghrsst/data/GDS2/L4/GLOB/NCEI/AVHRR_OI/v2/2015/323/2015111912-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc

[GitHub] [incubator-sdap-nexus] RKuttruff commented on a diff in pull request #185: SDAP-399: Quickstart update - Docker

2022-09-30 Thread GitBox 


RKuttruff commented on code in PR #185:
URL: 
https://github.com/apache/incubator-sdap-nexus/pull/185#discussion_r984909253


##
CHANGELOG.md:
##
@@ -41,9 +41,9 @@ and this project adheres to [Semantic 
Versioning](https://semver.org/spec/v2.0.0
 - Fixed issue where satellite to satellite matchups with the same dataset 
don't return the expected result
 - Fixed CSV and NetCDF matchup output bug
 - Fixed NetCDF output switching latitude and longitude
+- SDAP-399: Updated quickstart guide for standalone docker deployment of SDAP.
+- SDAP-399: Updated quickstart Jupyter notebook
 - Fixed import error causing `/timeSeriesSpark` queries to fail.
 - Fixed bug where domsresults no longer worked after successful matchup
 - Fixed certificate error in Dockerfile
-### Security

Review Comment:
   
https://github.com/RKuttruff/incubator-sdap-nexus/blob/quickstart-update/CHANGELOG.md?plain=1#L49



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[GitHub] [incubator-sdap-nexus] RKuttruff commented on a diff in pull request #185: SDAP-399: Quickstart update - Docker

2022-09-30 Thread GitBox 


RKuttruff commented on code in PR #185:
URL: 
https://github.com/apache/incubator-sdap-nexus/pull/185#discussion_r984909047


##
CHANGELOG.md:
##
@@ -41,9 +41,9 @@ and this project adheres to [Semantic 
Versioning](https://semver.org/spec/v2.0.0
 - Fixed issue where satellite to satellite matchups with the same dataset 
don't return the expected result
 - Fixed CSV and NetCDF matchup output bug
 - Fixed NetCDF output switching latitude and longitude
+- SDAP-399: Updated quickstart guide for standalone docker deployment of SDAP.
+- SDAP-399: Updated quickstart Jupyter notebook
 - Fixed import error causing `/timeSeriesSpark` queries to fail.
 - Fixed bug where domsresults no longer worked after successful matchup
 - Fixed certificate error in Dockerfile
-### Security

Review Comment:
   Well this is strange...
   It's there in the branch



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