date:20110704

Re: [Dspace-tech] Customising emails

2011-07-04 Thread Verdonck Christof





Dear


I precondition that you use version 1.7.2 (but I believe all others use
the sam principle).
Basically, you add the parameter in the feedback template file
(dspace\config\emails\feedback)

After that you change the file FeedbackServlet
(dspace-jspui\dspace-jspui-api\src\main\java\org\dspace\app\webui\servlet).
in the method doDSGet, you will find a part which looks like:

...
// All data is there, send the email
    try
    {
    Email email =
ConfigurationManager.getEmail(I18nUtil.getEmailFilename(context.getCurrentLocale(),
"feedback"));
    email.addRecipient(ConfigurationManager
    .getProperty("feedback.recipient"));

    email.addArgument(new Date()); // Date
    email.addArgument(formEmail); // Email
    email.addArgument(authEmail); // Logged in as
    email.addArgument(fromPage); // Referring page
    email.addArgument(userAgent); // User agent
    email.addArgument(sessionID); // Session ID
    email.addArgument(feedback); // The feedback itself

    // Replying to feedback will reply to email on form
    email.setReplyTo(formEmail);

    email.send();

    log.info(LogManager.getHeader(context, "sent_feedback",
"from="
    + formEmail));

    JSPManager.showJSP(request, response,
    "/feedback/acknowledge.jsp");
    }
...


There you can add you parameter by following the example:

    email.addArgument(myParam); 



Yours Sincerely



Christof Verdonck



Gary Browne wrote:

  Hi all,

I'd like to add some new parameters to the feedback email page but I can't work out how it's done? Any pointers would be much appreciated.

Thanks,
Gary


GARY BROWNE | Development Programmer 
Library IT Services | University Library
THE UNIVERSITY OF SYDNEY
Level 1, Fisher Library F03 | The University of Sydney | NSW | 2006
T +61 2 9351 5946  | F +61 2 9036 
E gary.bro...@sydney.edu.au  | W http://sydney.edu.au 

Sent from my plain old desktop computer.

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Re: [Dspace-tech] Change default sorting in search results

2011-07-04 Thread Verdonck Christof

Dear

I can assure you that it is there. I just downloaded version 1.7.1 and
looked in the source folder
dspace-1.7.1-src-release\dspace-discovery\dspace-discovery-xmlui-api\src\main\java\org\dspace\app\xmlui\aspect\discovery

I included the file as an attachment.

Yours Sincerely

Christof Verdonck

Nemiz, Elvi S. wrote:
Dear Christof,

Thanks for your reply. We are using version 1.7.1 and I can't find the
file AbstractSearch.java.

On Fri, Jul 1, 2011 at 4:19 PM, Verdonck
Christof
wrote:

Dear

I think you can change the file

dspace-1.7.2-src-release\dspace-discovery\dspace-discovery-xmlui-api\src\main\java\org\dspace\app\xmlui\aspect\discovery\AbstractSearch.java

replace
protected String getParameterOrder() {
String s =
ObjectModelHelper.getRequest(objectModel).getParameter("order");
return s != null ? s : "DESC";
}

with

protected String getParameterOrder() {
String s =
ObjectModelHelper.getRequest(objectModel).getParameter("order");
return s != null ? s : "ASC";
}

In this way, the list will be sorted, by default, in Ascending order.

Yours Sincerely

Christof Verdonck

Nemiz, Elvi S. wrote:

Dear All,

Hello, we are using Discovery in our DSpace instance with mirage as our
theme. I have noticed that when using the search box that can be found
in the home page or at the side bar, search results are sorted by
relevance in ascending order which means that items that are least
relevant are displayed at the top of the search results. If I'm using
jspui, search results are sorted by relevance in descending order.
Please visit http://repository.seafdec.org.ph/
and try to search using the search box in the side bar or at home page.
The jspui is at http://repository.seafdec.org.ph/jspui.
Try using the term shrimp. Please advice how can I change the default
sorting of search results in xmlui? Thanks in advance.

Sincerely,
Elvi S. Nemiz
Information Assistant
Library and Data Bank Services Section
Training and Information Division
SEAFDEC Aquaculture Department
Tigbauan, Iloilo
Philippines

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Elvi S. Nemiz
Information Assistant
Library and Data Bank Services Section
Training and Information Division
SEAFDEC Aquaculture Department
Tigbauan, Iloilo
Philippines

AbstractSearch.java
Description: java/
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Re: [Dspace-tech] [Dspace-devel] [DuraSpace JIRA] Commented: (DS-944) Authority Control Bug

2011-07-04 Thread Verdonck Christof

Dear

So, you are using the SRJournalTitle Authority Control?
In which environment are you tyrying to do this?

Yours Sincerely

Christof Verdonck

João Melo (DuraSpace JIRA) wrote:

[ https://jira.duraspace.org/browse/DS-944?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=20883#action_20883 ]

João Melo commented on DS-944:
--

I've used versions 1.6.2 and 1.7.2.
I'm using the SRJournalTitle Authority Control.

1. When some text is typed in the alternative title box, it, correctly, starts to show a load image (waiting for results), but the list of results isn't never shown.
(Prove: http://www.filefactory.com/file/cc2a5cd/n/Screenshot.png)

2. However, the list of items is retrieved from the server (inner html is changed).
(Prove: http://www.filefactory.com/file/cc2a5c9/n/autocomplete.txt)

Seems like this is a _javascript_ problem.

Authority Control Bug
-

Key: DS-944
URL: https://jira.duraspace.org/browse/DS-944
Project: DSpace
Issue Type: Bug
Environment: Unix
Reporter: João Melo

There is a bug using authority controls with firefox 4.0, IE 9, Chrome (for Mac) - the only tested.
The list of items is retrieved from the server but isn't shown.

Re: [Dspace-tech] Cannot Log-in to DSpace (xmlui) using Internet Explorer and Chrome

2011-07-04 Thread Verdonck Christof





 Dear


I checked the version you mention (Firefox 5, IE 8 and IE 9, Chrome
12.0.742.112), all works fine!


Yours Sincerely



Christof Verdonck



Amir Pourabdollah wrote:

  
  Hi,
   
  I am new to this mailing list. I have
recently installed a repository in XMLUI (DSpace 1.7.2) and started to
customize it. I use Firefox and everything is OK, but today I just
realized that in IE (versions 8 and
  9) and in Chrome when I try to log-in nothing
happens: The system does not show the user name on the top and it looks
like when anonymous user works. I tried these:
  - It works fine in JSPUI (all browsers)
  - In XMLUI, the system is still reacting to
wrong username/password but when those are correct, nothing happens.
  - The DSpace log file shows no error: shows a
successful login, but then loosing the name and anonymous user appears.
  - Suspected to cookies, changed IE privacy
option to the lowest level, no joy. The fact that JSPUI works fine says
it is not cookies, not sure...
   
  At the moment only Firefox does the job well.
   
  Please help...
   
  Thanks,
  Amir.
   
  
  
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[Dspace-tech] Unsubscribe

2011-07-04 Thread javed . hirani



Regards,

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Re: [Dspace-tech] Cannot Log-in to DSpace (xmlui) using Internet Explorer and Chrome

2011-07-04 Thread Amir Pourabdollah

Dear Christof, all,

I am also sure that this is not a problem with any DSpace installation and I am 
looking for what is wrong in my installation.
My instance is now available via http://elogeo.nottingham.ac.uk/xmlui
Please feel free to register and test the login issue (I can remove your 
account later if you like).
Many thanks,
Amir.

From: Verdonck Christof [mailto:verdonck.chris...@eurodyn.com]
Sent: 04 July 2011 09:05
To: Amir Pourabdollah
Subject: Re: [Dspace-tech] Cannot Log-in to DSpace (xmlui) using Internet 
Explorer and Chrome

Dear


I checked the version you mention (Firefox 5, IE 8 and IE 9, Chrome 
12.0.742.112), all works fine!


Yours Sincerely





Christof Verdonck


Amir Pourabdollah wrote:

Hi,



I am new to this mailing list. I have recently installed a repository in XMLUI 
(DSpace 1.7.2) and started to customize it. I use Firefox and everything is OK, 
but today I just realized that in IE (versions 8 and

9) and in Chrome when I try to log-in nothing happens: The system does not show 
the user name on the top and it looks like when anonymous user works. I tried 
these:

- It works fine in JSPUI (all browsers)

- In XMLUI, the system is still reacting to wrong username/password but when 
those are correct, nothing happens.

- The DSpace log file shows no error: shows a successful login, but then 
loosing the name and anonymous user appears.

- Suspected to cookies, changed IE privacy option to the lowest level, no joy. 
The fact that JSPUI works fine says it is not cookies, not sure...



At the moment only Firefox does the job well.



Please help...



Thanks,

Amir.



This message and any attachment are intended solely for the addressee and may 
contain confidential information. If you have received this message in error, 
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views or opinions expressed by the author of this email do not necessarily 
reflect the views of the University of Nottingham.

This message has been checked for viruses but the contents of an attachment may 
still contain software viruses which could damage your computer system: you are 
advised to perform your own checks. Email communications with the University of 
Nottingham may be monitored as permitted by UK legislation.







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Re: [Dspace-tech] Customising emails

2011-07-04 Thread Gary Browne


Great, thanks Christof,

That's just the info I was after.

Regards,
Gary

-Original Message-
From: Verdonck Christof [mailto:verdonck.chris...@eurodyn.com]
Sent: Mon 7/4/2011 18:32
To: Gary Browne; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Customising emails
 
Dear


I precondition that you use version 1.7.2 (but I believe all others use the sam 
principle).
Basically, you add the parameter in the feedback template file 
(dspace\config\emails\feedback)

After that you change the file FeedbackServlet 
(dspace-jspui\dspace-jspui-api\src\main\java\org\dspace\app\webui\servlet).
in the method doDSGet, you will find a part which looks like:

...
// All data is there, send the email
try
{
Email email = 
ConfigurationManager.getEmail(I18nUtil.getEmailFilename(context.getCurrentLocale(),
 "feedback"));
email.addRecipient(ConfigurationManager
.getProperty("feedback.recipient"));

email.addArgument(new Date()); // Date
email.addArgument(formEmail); // Email
email.addArgument(authEmail); // Logged in as
email.addArgument(fromPage); // Referring page
email.addArgument(userAgent); // User agent
email.addArgument(sessionID); // Session ID
email.addArgument(feedback); // The feedback itself

// Replying to feedback will reply to email on form
email.setReplyTo(formEmail);

email.send();

log.info(LogManager.getHeader(context, "sent_feedback", "from="
+ formEmail));

JSPManager.showJSP(request, response,
"/feedback/acknowledge.jsp");
}
...


There you can add you parameter by following the example:

email.addArgument(myParam); 



Yours Sincerely




Christof Verdonck



Gary Browne wrote: 

Hi all,

I'd like to add some new parameters to the feedback email page but I 
can't work out how it's done? Any pointers would be much appreciated.

Thanks,
Gary


GARY BROWNE | Development Programmer 
Library IT Services | University Library
THE UNIVERSITY OF SYDNEY
Level 1, Fisher Library F03 | The University of Sydney | NSW | 2006
T +61 2 9351 5946  | F +61 2 9036 
E gary.bro...@sydney.edu.au  | W http://sydney.edu.au 

Sent from my plain old desktop computer.

CRICOS 00026A
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Please think of our environment and only print this e-mail if necessary.




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Why? It contains a definitive record of application performance, 
security 
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makes 
sense of it. IT sense. And common sense.
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[Dspace-tech] remove the search

2011-07-04 Thread Webshet, Sisay (ILRI)

Hi there,

I am creating a new xmlui theme based on the Mirage theme.  I

want to remove the search box that appears in the body of the main

page (not the sidebar search box).  What's the best way to do this?  I

looked at news-xmlui.xml and dri2html/*.xsl but I can't find where

this search box is being pulled from.

 

Sisay

 

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[Dspace-tech] Usability of DSpace

2011-07-04 Thread Alexandre Magaz Graça

Hi,

Here, at the University of Lleida, we have an student who is working on 
the usability of DSpace for her Master's dissertation. She has already 
run some usability tests and before continuing, we would like to know if 
there's any interest on it. We would like the DSpace project to take 
advantage of this work, so any advice on this will be greatly appreciated.

By the way, I've seen an item about usability improvements in DSpace 1.8 
release notes [1], but I haven't find anything else about it in the 
wiki. Is there any place where we can check what has already been done?

[1] https://wiki.duraspace.org/display/DSPACE/DSpace+Release+1.8.0+Notes

Thanks,
Àlex

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Re: [Dspace-tech] Tomcat memory leak warning prevents restarting

2011-07-04 Thread Vlastimil Krejcir

   Hi,

   I'm sure that this issue has already been discussed here more than once 
and as I can remember without any final and useful universal solution 
(maybe there's not one). I have been fighting with it for years (and still 
don't know where lies the "bug"). My solution is to restart Tomcat (via 
cron) once a day and use a special piece of code to do this - I test if 
Tomcat is really stopped correctly and if not I kill the Tomcat 
process (bash script):


/opt/tomcat/bin/shutdown.sh
echo "Waiting 45 second for Tomcat shutdown..."
# This is necessary, because shutting down process can take some time, 
# 45 second is enough according to my experience 
sleep 45

RUNNING=`ps ax | grep opt\/tomcat | grep 2048`

if [ -z "$RUNNING" ]
then
 echo "Tomcat has been stopped...";
else
 echo "Shutdown failure... Trying to do hard kill."
 PID=`echo $RUNNING | cut -d ' ' -f 1`
 kill -9 $PID

# give system some time to kill it
sleep 3

# check it again
 RUNNING=`ps ax | grep opt\/tomcat | grep 2048`
 if [ -z "$RUNNING" ]
 then
 echo "Tomcat has been killed with -9."
 else
 echo "Cannot kill Tomcat. Administrator needed!"
 exit 1
 fi
fi


This "shutdown" Tomcat for sure.

Vlastik


Vlastimil Krejčíř
Library and Information Centre, Institute of Computer Science
Masaryk University, Brno, Czech Republic
Email: krejcir (at) ics (dot) muni (dot) cz
Phone: +420 549 49 3872
ICQ: 163963217
Jabber: kre...@jabber.org


On Tue, 24 May 2011, Jason Stirnaman wrote:

>
> I found a long, interesting thread from September 2010 at 
> http://www.mail-archive.com/dspace-tech@lists.sourceforge.net/msg11969.html 
> around this topic and an excellent description of the Tomcat 
> MemoryLeakProtection at http://wiki.apache.org/tomcat/MemoryLeakProtection. I 
> obviously didn't do my homework before posting. It looks like Tomcat 7.0.6 
> *might* "solve" this problem.
> However, I'm still unclear whether there is anything else I can do now to 
> work around it - to at least stop the leak detection from thwarting my 
> restarts?
>
> As Tim suggested in that earlier thread I'm including more details from my 
> production server while Tomcat is up and DSpace is running OK.
>
> Hardware:
>  Solaris 10 Zone virtual machine with 1167MHz processor
>  Output from top (I'm open to better methods, but I'm limited to the single 
> Zone.)
>  40 processes: 39 sleeping, 1 on cpu
>  CPU states: 93.5% idle,  3.7% user,  2.8% kernel,  0.0% iowait,  0.0% swap
>  Kernel: 18117 ctxsw, 6164 trap, 8377 intr, 45826 syscall, 4 fork, 543 flt, 
> 16 pgin, 40 pgout
>  Memory: 64G phys mem, 40G free mem, 4104M total swap, 4104M free swap
>
> RAM:
> "CATALINA_OPTS" value="-Xms256m -Xmx1028m -XX:MaxPermSize=256m"
> I recently increased RAM to 1028 from (I think) 256M and I doubled PermGen. 
> Since then the Java process has consistently been using around 490M and 
> usually less than 1% CPU.
> Postgres uses around 520M.
>
> DSpace: version 1.7.1 with XMLUI and Discovery
>
> Issues: Prior to my increasing the allotted Catalina RAM and Permgen, Tomcat 
> would stop responding around every 3 days (? number of requests) due to the 
> database pool filling up ("cannot get a connection - pool exhausted"). I 
> decided to also restart Tomcat every night to prevent this from happening. 
> That's when I encountered the memory leak warnings preventing my restarts.
>
> Jason
>
>
> Jason Stirnaman
> Biomedical Librarian, Digital Projects
> A.R. Dykes Library, University of Kansas Medical Center
> jstirna...@kumc.edu
> 913-588-7319
>
>
 On 5/23/2011 at 01:02 PM, in message <4DDAA130.D22 : 5 : 23711>, Jason 
 Stirnaman wrote:
>
>
> I get the error below when stopping Tomcat. In this particular case, I was 
> trying to use Solaris' SMF to restart the Tomcat service. Instead, it never 
> completed shutting down and it stopped answering requests. I got this error 
> stanza repeated over and over in the log. Any ideas what's going on?
> Thanks,
> Jason
>
>
> Details:
> DSpace 1.7.1 w/ Discovery
> Tomcat 6.0.32
> Solaris 10
>
>
> May 21, 2011 12:00:07 AM org.apache.coyote.http11.Http11Protocol pause
> INFO: Pausing Coyote HTTP/1.1 on http-80
> May 21, 2011 12:00:08 AM org.apache.catalina.core.StandardService stop
> May 21, 2011 12:00:07 AM org.apache.coyote.http11.Http11Protocol pause
> May 21, 2011 12:00:07 AM org.apache.coyote.http11.Http11Protocol pause
> INFO: Pausing Coyote HTTP/1.1 on http-80
> May 21, 2011 12:00:08 AM org.apache.catalina.core.StandardService stop
> INFO: Stopping service Catalina
> May 21, 2011 12:00:49 AM org.apache.catalina.loader.WebappClassLoader 
> clearReferencesThreads
> SEVERE: The web application [] appears to have started a thread named 
> [MultiThreadedHttpC

Re: [Dspace-tech] remove the search

2011-07-04 Thread André

Dear Sisay,

Don't know if this is the best way as you requested, but one solution would
be to remove it from the sitemap for your theme.

[dspace-src]/dspace-discovery/dspace-discovery-xmlui-api/src/main/resources/aspects/Discovery/sitemap.xmap

You'll find:



Just comment this map:transform and it should work.

Kind regards,
Andre Assada



2011/7/4 Webshet, Sisay (ILRI) 

>  Hi there,
>
> I am creating a new xmlui theme based on the Mirage theme.  I
>
> want to remove the search box that appears in the body of the main
>
> page (not the sidebar search box).  What's the best way to do this?  I
>
> looked at news-xmlui.xml and dri2html/*.xsl but I can't find where
>
> this search box is being pulled from.
>
> ** **
>
> Sisay
>
> ** **
>
>
> --
> All of the data generated in your IT infrastructure is seriously valuable.
> Why? It contains a definitive record of application performance, security
> threats, fraudulent activity, and more. Splunk takes this data and makes
> sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-d2d-c2
> ___
> DSpace-tech mailing list
> DSpace-tech@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>
>
--
All of the data generated in your IT infrastructure is seriously valuable.
Why? It contains a definitive record of application performance, security 
threats, fraudulent activity, and more. Splunk takes this data and makes 
sense of it. IT sense. And common sense.
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Re: [Dspace-tech] remove the search

2011-07-04 Thread Verdonck Christof

Dear

Yes, this is also the solution I suggest you.

Christof Verdonck

André wrote:
Dear Sisay,

Don't know if this is the best way as you requested, but one solution
would be to remove it from the sitemap for your theme.

[dspace-src]/dspace-discovery/dspace-discovery-xmlui-api/src/main/resources/aspects/Discovery/sitemap.xmap

You'll find:

Just comment this map:transform and it should work.

Kind regards,
Andre Assada

2011/7/4 Webshet, Sisay (ILRI)

Hi
there,
I
am creating a new xmlui theme based on the Mirage theme. I
want
to remove the search box that appears in the body of the main
page
(not the sidebar search box). What's the best way to do this? I
looked
at news-xmlui.xml and dri2html/*.xsl but I can't find where
this
search box is being pulled from.
Sisay

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Re: [Dspace-tech] Usability of DSpace

2011-07-04 Thread Michael Guthrie

Hi Alex

I am sure the community would find it very useful to read the student's 
findings. We ate Open Repository would certainly be interested in reading.

Bests,

Michael


Michael Guthrie
Manager, Open Repository

BioMed Central
www.openrepository.com


-Original Message-
From: Alexandre Magaz Graça [mailto:alexandre.ma...@udl.cat] 
Sent: 04 July 2011 13:28
To: DSpace Tech
Subject: [Dspace-tech] Usability of DSpace

Hi,

Here, at the University of Lleida, we have an student who is working on 
the usability of DSpace for her Master's dissertation. She has already 
run some usability tests and before continuing, we would like to know if 
there's any interest on it. We would like the DSpace project to take 
advantage of this work, so any advice on this will be greatly appreciated.

By the way, I've seen an item about usability improvements in DSpace 1.8 
release notes [1], but I haven't find anything else about it in the 
wiki. Is there any place where we can check what has already been done?

[1] https://wiki.duraspace.org/display/DSPACE/DSpace+Release+1.8.0+Notes

Thanks,
Àlex

--
All of the data generated in your IT infrastructure is seriously valuable.
Why? It contains a definitive record of application performance, security 
threats, fraudulent activity, and more. Splunk takes this data and makes 
sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-d2d-c2
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Why? It contains a definitive record of application performance, security 
threats, fraudulent activity, and more. Splunk takes this data and makes 
sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-d2d-c2
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