Re: [Dspace-tech] error messages when submitting to dspace

2009-01-23 Thread Diggory Mark

On Jan 23, 2009, at 2:31 PM, Brian Freels-Stendel wrote:

> FWIW, we see the same upload and license errors on a regular, but not
> quite common, basis.  Particular accounts seem to be affected
> intermittently.  If the submitter tries again, though, the second
> attempt is nearly always successful.  We find the same errors in our  
> log
> files.

Just a speculation (from my own experience) that may be "frequently  
active submission accounts" rather that specific accounts.

> Our tomcat runs as 'tomcat', but dspace and tomcat users belong to  
> each
> others' groups, so they should both be able to write to all relevant
> directories.

This may not always be the case if your group permissions are not  
maintained (via a stickybit) on the assetstore directory when new  
directories are created in it.  We have the same permissions setup  
while I was working at MIT, you need to make sure to have "group"  
permissions set to write on the directories, there is a chance that  
they can get "stripped" if you run any CLI dspace scripts with the  
umask set wrong.  Likewise, if the startup script for your tomcat  
forces you to a more secure umask while running, you cannot get tomcat  
not to write the group write permission on any file it creates.

I ultimately setup a cron job that scanned the assetstore periodically  
checking for and correcting errant permissions bits.

I ultimately have come to the conclusion that trying to run the CLI  
apps and the tomcat with separate user accounts on linux is an arduous  
thing to deal with, especially with debian rooted "start-stop-deamon"  
based scripts having forced umask security embedded in them stopping  
the group and world permissions from being write.  f you can run under  
the same user... you'll rather save your sys admin some torture.  But  
hey, now we're really digging in the dark...

-Mark

>
>
> I don't have any information to add except that it happens to us, too.
>
> Brian Freels-Stendel
> University of New Mexico
>
>
 On 1/23/2009 at 2:00 PM, in message <497a2fde.5090...@uic.edu>,
> Sandy De Groote
>  wrote:
>> Unfortunately non of these suggestions seems to be the problem.  Any
>
>> other suggestions?
>> thanks.
>>
>> Diggory Mark wrote:
>>> Yes, filesystem permissions in the assetstore would cause both to
>>> fail. But also look at your filesystem quota as well to make sure
>>> there is disk space.
>>>
>>> On Jan 22, 2009, at 9:32 AM, Claudia Jürgen wrote:
>>>
 Hi Sandy,

 seems to be the problem mentioned below, an authorization one.

 Your tomcat user needs the authorization to write to
 [dspace]/assetstore.

 In the installation instructions it is recommended to run tomcat as
> the
 dspace user which owns the [dspace] directory.

 Claudia



 Sandy De Groote schrieb:
> Claudia,
> Thanks for any help you can provide!
>
>
>
> Jan 20, 2009 8:30:13 AM
> org.apache.catalina.core.StandardWrapperValve
> invoke
> WARNING: Servlet.service() for servlet submit threw exception
> java.io.IOException: No such file or directory
>   at java.io.UnixFileSystem.createFileExclusively(Native Method)
>   at java.io.File.createNewFile(File.java:850)
>   at
>
> edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
>   at
>
>>
> org 
> .dspace 
> .storage.bitstore.BitstreamStorageManager.store(BitstreamStorageMan
>> ager.java:332)
>
>
>   at org.dspace.content.Bitstream.create(Bitstream.java:184)
>   at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
>   at
> org.dspace.content.Item.createSingleBitstream(Item.java:1185)
>   at org.dspace.content.Item.licenseGranted(Item.java:1265)
>   at
>
>>
> org 
> .dspace 
> .app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:
>> 1615)
>
>
>   at
>
> org 
> .dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java: 
> 424)
>
>
>   at
>
>>
> org 
> .dspace 
> .app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:
>> 147)
>
>
>   at
>
> org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java: 
> 105)
>
>
>   at
> javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
>   at
> javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>   at
>
>>
> org 
> .apache 
> .catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationF
>> ilterChain.java:252)
>
>
>   at
>
>>
> org 
> .apache 
> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCha
>> in.java:173)
>
>
>   at
>
>>
> org 
> .dspace 
> .app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilte
>> r.java:98)
>
>
>   at
>
>>
> org 
> .apache 
> .catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationF
>> ilterChain.java:202)
>
>
>   at
>
>>
> org 
> .apache 
> .catalina.core.Applicat

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-23 Thread Brian Freels-Stendel
FWIW, we see the same upload and license errors on a regular, but not
quite common, basis.  Particular accounts seem to be affected
intermittently.  If the submitter tries again, though, the second
attempt is nearly always successful.  We find the same errors in our log
files.

Our tomcat runs as 'tomcat', but dspace and tomcat users belong to each
others' groups, so they should both be able to write to all relevant
directories.  

I don't have any information to add except that it happens to us, too.

Brian Freels-Stendel
University of New Mexico


>>> On 1/23/2009 at 2:00 PM, in message <497a2fde.5090...@uic.edu>,
Sandy De Groote
 wrote:
> Unfortunately non of these suggestions seems to be the problem.  Any

> other suggestions?
> thanks.
> 
> Diggory Mark wrote:
>> Yes, filesystem permissions in the assetstore would cause both to 
>> fail. But also look at your filesystem quota as well to make sure 
>> there is disk space.
>>
>> On Jan 22, 2009, at 9:32 AM, Claudia Jürgen wrote:
>>
>>> Hi Sandy,
>>>
>>> seems to be the problem mentioned below, an authorization one.
>>>
>>> Your tomcat user needs the authorization to write to
>>> [dspace]/assetstore.
>>>
>>> In the installation instructions it is recommended to run tomcat as
the
>>> dspace user which owns the [dspace] directory.
>>>
>>> Claudia
>>>
>>>
>>>
>>> Sandy De Groote schrieb:
 Claudia,
 Thanks for any help you can provide!



 Jan 20, 2009 8:30:13 AM
org.apache.catalina.core.StandardWrapperValve
 invoke
 WARNING: Servlet.service() for servlet submit threw exception
 java.io.IOException: No such file or directory
at java.io.UnixFileSystem.createFileExclusively(Native Method)
at java.io.File.createNewFile(File.java:850)
at 

edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
at
 
>
org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageMan
> ager.java:332) 


at org.dspace.content.Bitstream.create(Bitstream.java:184)
at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
at
org.dspace.content.Item.createSingleBitstream(Item.java:1185)
at org.dspace.content.Item.licenseGranted(Item.java:1265)
at
 
>
org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:
> 1615) 


at

org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)


at
 
>
org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:
> 147) 


at

org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)


at
javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
at
javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
at
 
>
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationF
> ilterChain.java:252) 


at
 
>
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCha
> in.java:173) 


at
 
>
org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilte
> r.java:98) 


at
 
>
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationF
> ilterChain.java:202) 


at
 
>
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterCha
> in.java:173) 


at
 
>
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.jav
> a:213) 


at
 
>
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.jav
> a:178) 


at
 
>
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)

> 


at
 
>
org.apache.catalina.valves.ErrorReportValve.i
nvoke(ErrorReportValve.java:105)

> 


at

org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:541)


at
 
>
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:
> 107) 


at

org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148)


at

org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:869)


at
 
>
org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processCo
> nnection(Http11BaseProtocol.java:664) 


at
 
>
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java
> :527) 


at
 
>
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWor
> kerThread.java:80) 


at
 
>
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java
> :684) 


at java.lang.Thread.run(Thread.java:595)
 Jan 20, 2009 8:44:05 AM
org.apache.catalina.core.StandardWrapperValve
 invoke
 WARNING: Servlet.service() for servlet subm

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-23 Thread Diggory Mark
Can you go into you assetstore directory and create files via the  
commandline as your tomcat user? Likewise verify that you are testing  
with your webapplication servers permissions more specifically, if  
your application server can't create files in the directory, you will  
get this sort of error.

Mark


On Jan 23, 2009, at 1:00 PM, Sandy De Groote wrote:

> Unfortunately non of these suggestions seems to be the problem.  Any  
> other suggestions?
> thanks.
>
> Diggory Mark wrote:
>> Yes, filesystem permissions in the assetstore would cause both to  
>> fail. But also look at your filesystem quota as well to make sure  
>> there is disk space.
>>
>> On Jan 22, 2009, at 9:32 AM, Claudia Jürgen wrote:
>>
>>> Hi Sandy,
>>>
>>> seems to be the problem mentioned below, an authorization one.
>>>
>>> Your tomcat user needs the authorization to write to
>>> [dspace]/assetstore.
>>>
>>> In the installation instructions it is recommended to run tomcat  
>>> as the
>>> dspace user which owns the [dspace] directory.
>>>
>>> Claudia
>>>
>>>
>>>
>>> Sandy De Groote schrieb:
 Claudia,
 Thanks for any help you can provide!



 Jan 20, 2009 8:30:13 AM  
 org.apache.catalina.core.StandardWrapperValve
 invoke
 WARNING: Servlet.service() for servlet submit threw exception
 java.io.IOException: No such file or directory
   at java.io.UnixFileSystem.createFileExclusively(Native Method)
   at java.io.File.createNewFile(File.java:850)
   at  
 edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
   at
 org 
 .dspace 
 .storage 
 .bitstore 
 .BitstreamStorageManager.store(BitstreamStorageManager.java:332)

   at org.dspace.content.Bitstream.create(Bitstream.java:184)
   at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
   at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
   at org.dspace.content.Item.licenseGranted(Item.java:1265)
   at
 org 
 .dspace 
 .app 
 .webui.servlet.SubmitServlet.processLicense(SubmitServlet.java: 
 1615)

   at
 org 
 .dspace 
 .app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)
   at
 org 
 .dspace 
 .app 
 .webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)

   at
 org 
 .dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java: 
 105)
   at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
   at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
   at
 org 
 .apache 
 .catalina 
 .core 
 .ApplicationFilterChain 
 .internalDoFilter(ApplicationFilterChain.java:252)

   at
 org 
 .apache 
 .catalina 
 .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java: 
 173)

   at
 org 
 .dspace 
 .app 
 .webui 
 .filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)

   at
 org 
 .apache 
 .catalina 
 .core 
 .ApplicationFilterChain 
 .internalDoFilter(ApplicationFilterChain.java:202)

   at
 org 
 .apache 
 .catalina 
 .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java: 
 173)

   at
 org 
 .apache 
 .catalina 
 .core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)

   at
 org 
 .apache 
 .catalina 
 .core.StandardContextValve.invoke(StandardContextValve.java:178)

   at
 org 
 .apache 
 .catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)

   at
 org 
 .apache 
 .catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105)

   at
 org 
 .apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java: 
 541)
   at
 org 
 .apache 
 .catalina 
 .core.StandardEngineValve.invoke(StandardEngineValve.java:107)

   at
 org 
 .apache 
 .catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148)
   at
 org 
 .apache 
 .coyote.http11.Http11Processor.process(Http11Processor.java:869)
   at
 org.apache.coyote.http11.Http11BaseProtocol 
 $ 
 Http11ConnectionHandler.processConnection(Http11BaseProtocol.java: 
 664)

   at
 org 
 .apache 
 .tomcat 
 .util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:527)

   at
 org 
 .apache 
 .tomcat 
 .util 
 .net 
 .LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java: 
 80)

   at
 org.apache.tomcat.util.threads.ThreadPool 
 $ControlRunnable.run(ThreadPool.java:684)

   at java.lang.Thread.run(Thread.java:595)
 Jan 20, 2009 8:44:05 AM  
 org.apache.catalina.core.StandardWrapperValve
 invoke
 WARNING: Servlet.service() for servlet submit threw exception
 java.io.IOException

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-23 Thread Sandy De Groote
Unfortunately non of these suggestions seems to be the problem.  Any 
other suggestions?
thanks.

Diggory Mark wrote:
> Yes, filesystem permissions in the assetstore would cause both to 
> fail. But also look at your filesystem quota as well to make sure 
> there is disk space.
>
> On Jan 22, 2009, at 9:32 AM, Claudia Jürgen wrote:
>
>> Hi Sandy,
>>
>> seems to be the problem mentioned below, an authorization one.
>>
>> Your tomcat user needs the authorization to write to
>> [dspace]/assetstore.
>>
>> In the installation instructions it is recommended to run tomcat as the
>> dspace user which owns the [dspace] directory.
>>
>> Claudia
>>
>>
>>
>> Sandy De Groote schrieb:
>>> Claudia,
>>> Thanks for any help you can provide!
>>>
>>>
>>>
>>> Jan 20, 2009 8:30:13 AM org.apache.catalina.core.StandardWrapperValve
>>> invoke
>>> WARNING: Servlet.service() for servlet submit threw exception
>>> java.io.IOException: No such file or directory
>>>at java.io.UnixFileSystem.createFileExclusively(Native Method)
>>>at java.io.File.createNewFile(File.java:850)
>>>at 
>>> edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
>>>at
>>> org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>>>  
>>>
>>>
>>>at org.dspace.content.Bitstream.create(Bitstream.java:184)
>>>at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
>>>at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
>>>at org.dspace.content.Item.licenseGranted(Item.java:1265)
>>>at
>>> org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
>>>  
>>>
>>>
>>>at
>>> org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424) 
>>>
>>>at
>>> org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)
>>>  
>>>
>>>
>>>at
>>> org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105) 
>>>
>>>at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
>>>at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>>at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
>>>  
>>>
>>>
>>>at
>>> org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:541) 
>>>
>>>at
>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107)
>>>  
>>>
>>>
>>>at
>>> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) 
>>>
>>>at
>>> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:869) 
>>>
>>>at
>>> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:664)
>>>  
>>>
>>>
>>>at
>>> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:527)
>>>  
>>>
>>>
>>>at
>>> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:80)
>>>  
>>>
>>>
>>>at
>>> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684)
>>>  
>>>
>>>
>>>at java.lang.Thread.run(Thread.java:595)
>>> Jan 20, 2009 8:44:05 AM org.apache.catalina.core.StandardWrapperValve
>>> invoke
>>> WARNING: Servlet.service() for servlet submit threw exception
>>> java.io.IOException: No such file or directory
>>>at java.io.UnixFileSystem.createFileExclusively(Native Method)
>>>at java.io.File.createNewFile(File.java:850)
>>>at 
>>> edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
>>>at
>>> org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>>>  
>>>
>>>
>>>at org.dspace.content.Bitstream.create(Bitstream.java:184)
>>>at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
>>>at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
>>>at org.dspace.content.Item.licenseGranted(Item.java:1265)
>>>at
>>> org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
>>>  
>>>
>>>
>>>at
>>> org.dspace.a

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-22 Thread Diggory Mark
Yes, filesystem permissions in the assetstore would cause both to  
fail. But also look at your filesystem quota as well to make sure  
there is disk space.

On Jan 22, 2009, at 9:32 AM, Claudia Jürgen wrote:

> Hi Sandy,
>
> seems to be the problem mentioned below, an authorization one.
>
> Your tomcat user needs the authorization to write to
> [dspace]/assetstore.
>
> In the installation instructions it is recommended to run tomcat as  
> the
> dspace user which owns the [dspace] directory.
>
> Claudia
>
>
>
> Sandy De Groote schrieb:
>> Claudia,
>> Thanks for any help you can provide!
>>
>>
>>
>> Jan 20, 2009 8:30:13 AM org.apache.catalina.core.StandardWrapperValve
>> invoke
>> WARNING: Servlet.service() for servlet submit threw exception
>> java.io.IOException: No such file or directory
>>at java.io.UnixFileSystem.createFileExclusively(Native Method)
>>at java.io.File.createNewFile(File.java:850)
>>at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java: 
>> 486)
>>at
>> org 
>> .dspace 
>> .storage 
>> .bitstore 
>> .BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>>
>>at org.dspace.content.Bitstream.create(Bitstream.java:184)
>>at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
>>at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
>>at org.dspace.content.Item.licenseGranted(Item.java:1265)
>>at
>> org 
>> .dspace 
>> .app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java: 
>> 1615)
>>
>>at
>> org 
>> .dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java: 
>> 424)
>>at
>> org 
>> .dspace 
>> .app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java: 
>> 147)
>>
>>at
>> org 
>> .dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java: 
>> 105)
>>at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
>>at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>at
>> org 
>> .apache 
>> .catalina 
>> .core 
>> .ApplicationFilterChain 
>> .internalDoFilter(ApplicationFilterChain.java:252)
>>
>>at
>> org 
>> .apache 
>> .catalina 
>> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java: 
>> 173)
>>
>>at
>> org 
>> .dspace 
>> .app 
>> .webui 
>> .filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)
>>
>>at
>> org 
>> .apache 
>> .catalina 
>> .core 
>> .ApplicationFilterChain 
>> .internalDoFilter(ApplicationFilterChain.java:202)
>>
>>at
>> org 
>> .apache 
>> .catalina 
>> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java: 
>> 173)
>>
>>at
>> org 
>> .apache 
>> .catalina 
>> .core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
>>
>>at
>> org 
>> .apache 
>> .catalina 
>> .core.StandardContextValve.invoke(StandardContextValve.java:178)
>>
>>at
>> org 
>> .apache 
>> .catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)
>>
>>at
>> org 
>> .apache 
>> .catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105)
>>
>>at
>> org 
>> .apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java: 
>> 541)
>>at
>> org 
>> .apache 
>> .catalina.core.StandardEngineValve.invoke(StandardEngineValve.java: 
>> 107)
>>
>>at
>> org 
>> .apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java: 
>> 148)
>>at
>> org 
>> .apache.coyote.http11.Http11Processor.process(Http11Processor.java: 
>> 869)
>>at
>> org.apache.coyote.http11.Http11BaseProtocol 
>> $Http11ConnectionHandler.processConnection(Http11BaseProtocol.java: 
>> 664)
>>
>>at
>> org 
>> .apache 
>> .tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java: 
>> 527)
>>
>>at
>> org 
>> .apache 
>> .tomcat 
>> .util 
>> .net 
>> .LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:80)
>>
>>at
>> org.apache.tomcat.util.threads.ThreadPool 
>> $ControlRunnable.run(ThreadPool.java:684)
>>
>>at java.lang.Thread.run(Thread.java:595)
>> Jan 20, 2009 8:44:05 AM org.apache.catalina.core.StandardWrapperValve
>> invoke
>> WARNING: Servlet.service() for servlet submit threw exception
>> java.io.IOException: No such file or directory
>>at java.io.UnixFileSystem.createFileExclusively(Native Method)
>>at java.io.File.createNewFile(File.java:850)
>>at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java: 
>> 486)
>>at
>> org 
>> .dspace 
>> .storage 
>> .bitstore 
>> .BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>>
>>at org.dspace.content.Bitstream.create(Bitstream.java:184)
>>at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
>>at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
>>at org.dspace.content.Item.licenseGranted(Item.java:1265)
>>at
>> org 
>> .dspace 
>> .app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java: 
>> 1615)
>>
>>at
>> org 
>> .dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java: 
>> 424)
>>at
>> 

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-22 Thread Claudia Jürgen
Hi Sandy,

seems to be the problem mentioned below, an authorization one.

Your tomcat user needs the authorization to write to
[dspace]/assetstore.

In the installation instructions it is recommended to run tomcat as the 
dspace user which owns the [dspace] directory.

Claudia



Sandy De Groote schrieb:
> Claudia,
> Thanks for any help you can provide!
> 
> 
> 
> Jan 20, 2009 8:30:13 AM org.apache.catalina.core.StandardWrapperValve 
> invoke
> WARNING: Servlet.service() for servlet submit threw exception
> java.io.IOException: No such file or directory
> at java.io.UnixFileSystem.createFileExclusively(Native Method)
> at java.io.File.createNewFile(File.java:850)
> at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
> at
> org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>  
> 
> at org.dspace.content.Bitstream.create(Bitstream.java:184)
> at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
> at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
> at org.dspace.content.Item.licenseGranted(Item.java:1265)
> at
> org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
>  
> 
> at
> org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)
>  
> 
> at
> org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
>  
> 
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
>  
> 
> at
> org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)
>  
> 
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
>  
> 
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
>  
> 
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
>  
> 
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178)
>  
> 
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) 
> 
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) 
> 
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:541)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107)
>  
> 
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148)
> at
> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:869)
> at
> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:664)
>  
> 
> at
> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:527)
>  
> 
> at
> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:80)
>  
> 
> at
> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684)
>  
> 
> at java.lang.Thread.run(Thread.java:595)
> Jan 20, 2009 8:44:05 AM org.apache.catalina.core.StandardWrapperValve 
> invoke
> WARNING: Servlet.service() for servlet submit threw exception
> java.io.IOException: No such file or directory
> at java.io.UnixFileSystem.createFileExclusively(Native Method)
> at java.io.File.createNewFile(File.java:850)
> at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
> at
> org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
>  
> 
> at org.dspace.content.Bitstream.create(Bitstream.java:184)
> at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
> at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
> at org.dspace.content.Item.licenseGranted(Item.java:1265)
> at
> org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
>  
> 
> at
> org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)
>  
> 
> at
> org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
>  
> 
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
>  
> 
> at
> org.dspace.app.webui.filter.Register

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-22 Thread Sandy De Groote
Claudia,
Thanks for any help you can provide!



Jan 20, 2009 8:30:13 AM org.apache.catalina.core.StandardWrapperValve invoke
WARNING: Servlet.service() for servlet submit threw exception
java.io.IOException: No such file or directory
at java.io.UnixFileSystem.createFileExclusively(Native Method)
at java.io.File.createNewFile(File.java:850)
at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
at
org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
at org.dspace.content.Bitstream.create(Bitstream.java:184)
at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
at org.dspace.content.Item.licenseGranted(Item.java:1265)
at
org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
at
org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)
at
org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)
at
org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
at
org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105)
at
org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:541)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:869)
at
org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:664)
at
org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:527)
at
org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:80)
at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684)
at java.lang.Thread.run(Thread.java:595)
Jan 20, 2009 8:44:05 AM org.apache.catalina.core.StandardWrapperValve invoke
WARNING: Servlet.service() for servlet submit threw exception
java.io.IOException: No such file or directory
at java.io.UnixFileSystem.createFileExclusively(Native Method)
at java.io.File.createNewFile(File.java:850)
at edu.sdsc.grid.io.local.LocalFile.createNewFile(LocalFile.java:486)
at
org.dspace.storage.bitstore.BitstreamStorageManager.store(BitstreamStorageManager.java:332)
at org.dspace.content.Bitstream.create(Bitstream.java:184)
at org.dspace.content.Bundle.createBitstream(Bundle.java:362)
at org.dspace.content.Item.createSingleBitstream(Item.java:1185)
at org.dspace.content.Item.licenseGranted(Item.java:1265)
at
org.dspace.app.webui.servlet.SubmitServlet.processLicense(SubmitServlet.java:1615)
at
org.dspace.app.webui.servlet.SubmitServlet.doDSPost(SubmitServlet.java:424)
at
org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:147)
at
org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:105)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
at
org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:98)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.jav

Re: [Dspace-tech] error messages when submitting to dspace

2009-01-22 Thread Claudia Jürgen
Hi Sandy,

could you provide more information (stack trace).

Just a guess. Got the tomcat user the proper rights - i.e. does [dspace] 
your dspace intallation directory belongs to the user tomcat (assuming 
this is your servlet container) is running as?

Claudia Jürgen



Sandy De Groote schrieb:
> We are getting many internal error messages when submitting to dspace?  
> We typically get
> them at two places:  1.  uploading the file or 2.  the final page when we
> click on "I grant the license."Also, we are unable to
> upload anything to one of our communities. We get an error on
> the final page almost every time.
> 
> Can anyone point us in the right direction to fix this?  I tried looking 
> at the documentation but I couldn't get to the right release.  (We are 
> not using the latest version of dspace  - we are using the one before 1.5)
> Sandy
> 

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Re: [Dspace-tech] error messages when submitting to dspace

2009-01-22 Thread felipe Melero

Could you please put the stack trace of dspace.log?
regards,
Felipe



Sandy De Groote escribió:
We are getting many internal error messages when submitting to dspace?  
We typically get

them at two places:  1.  uploading the file or 2.  the final page when we
click on "I grant the license."Also, we are unable to
upload anything to one of our communities. We get an error on
the final page almost every time.

Can anyone point us in the right direction to fix this?  I tried looking 
at the documentation but I couldn't get to the right release.  (We are 
not using the latest version of dspace  - we are using the one before 1.5)

Sandy

  
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SourcForge Community
SourceForge wants to tell your story.
http://p.sf.net/sfu/sf-spreadtheword___
DSpace-tech mailing list
DSpace-tech@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/dspace-tech