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Summary: Review Request: perl-bioperl-run - Perl interface to various
bioinformatics applications
https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=236877
[EMAIL PROTECTED] changed:
What|Removed |Added
Flag|fedora-review? |fedora-review+
--- Additional Comments From [EMAIL PROTECTED] 2007-04-18 05:21 EST ---
Review:
+ package builds in mock (development i386).
+ rpmlint is silent for SRPM and for RPM.
+ source files match upstream url
0f3fb1589062e857aaf7d5523c18f5ba bioperl-run-1.5.2_100.tar.gz
+ package meets naming and packaging guidelines.
+ specfile is properly named, is cleanly written
+ Spec file is written in American English.
+ Spec file is legible.
+ dist tag is present.
+ build root is correct.
+ license is open source-compatible.
+ License text is included in package.
+ %doc is present.
+ BuildRequires are proper.
+ %clean is present.
+ package installed properly.
+ Macro use appears rather consistent.
+ Package contains code, not content.
+ no headers or static libraries.
+ no .pc file present.
+ no -devel subpackage
+ no .la files.
+ no translations are available
+ Does owns the directories it creates.
+ no scriptlets present.
+ no duplicates in %files.
+ file permissions are appropriate.
+ make test outputs nothing.
+Provides: perl(Bio::Factory::EMBOSS) perl(Bio::Installer::Clustalw)
perl(Bio::Installer::EMBOSS) perl(Bio::Installer::Generic)
perl(Bio::Installer::Muscle) perl(Bio::Installer::PAML)
perl(Bio::Installer::Probcons) perl(Bio::Installer::TCoffee)
perl(Bio::Tools::Run::AbstractRunner) perl(Bio::Tools::Run::Alignment::Amap)
perl(Bio::Tools::Run::Alignment::Blat)
perl(Bio::Tools::Run::Alignment::Clustalw) perl(Bio::Tools::Run::Alignment::DBA)
perl(Bio::Tools::Run::Alignment::Exonerate)
perl(Bio::Tools::Run::Alignment::Kalign) perl(Bio::Tools::Run::Alignment::Lagan)
perl(Bio::Tools::Run::Alignment::MAFFT) perl(Bio::Tools::Run::Alignment::Muscle)
perl(Bio::Tools::Run::Alignment::Probalign)
perl(Bio::Tools::Run::Alignment::Probcons)
perl(Bio::Tools::Run::Alignment::Sim4)
perl(Bio::Tools::Run::Alignment::StandAloneFasta)
perl(Bio::Tools::Run::Alignment::TCoffee) perl(Bio::Tools::Run::Analysis)
perl(Bio::Tools::Run::Analysis::Job) perl(Bio::Tools::Run::Analysis::Job::soap)
perl(Bio::Tools::Run::Analysis::Utils) perl(Bio::Tools::Run::Analysis::soap)
perl(Bio::Tools::Run::AnalysisFactory)
perl(Bio::Tools::Run::AnalysisFactory::Pise)
perl(Bio::Tools::Run::AnalysisFactory::soap) perl(Bio::Tools::Run::Cap3)
perl(Bio::Tools::Run::Coil) perl(Bio::Tools::Run::EMBOSSApplication)
perl(Bio::Tools::Run::EMBOSSacd) perl(Bio::Tools::Run::Eponine)
perl(Bio::Tools::Run::FootPrinter) perl(Bio::Tools::Run::Genewise)
perl(Bio::Tools::Run::Genscan) perl(Bio::Tools::Run::Hmmer)
perl(Bio::Tools::Run::JavaRunner) perl(Bio::Tools::Run::Mdust)
perl(Bio::Tools::Run::Phrap) perl(Bio::Tools::Run::Phylo::Forester::SDI)
perl(Bio::Tools::Run::Phylo::LVB) perl(Bio::Tools::Run::Phylo::Molphy::ProtML)
perl(Bio::Tools::Run::Phylo::PAML::Baseml)
perl(Bio::Tools::Run::Phylo::PAML::Codeml)
perl(Bio::Tools::Run::Phylo::PAML::Evolver)
perl(Bio::Tools::Run::Phylo::PAML::Yn00)
perl(Bio::Tools::Run::Phylo::Phylip::Base)
perl(Bio::Tools::Run::Phylo::Phylip::Consense)
perl(Bio::Tools::Run::Phylo::Phylip::DrawGram)
perl(Bio::Tools::Run::Phylo::Phylip::DrawTree)
perl(Bio::Tools::Run::Phylo::Phylip::Neighbor)
perl(Bio::Tools::Run::Phylo::Phylip::PhylipConf)
perl(Bio::Tools::Run::Phylo::Phylip::ProtDist)
perl(Bio::Tools::Run::Phylo::Phylip::ProtPars)
perl(Bio::Tools::Run::Phylo::Phylip::SeqBoot)
perl(Bio::Tools::Run::PiseApplication)
perl(Bio::Tools::Run::PiseApplication::CSR)
perl(Bio::Tools::Run::PiseApplication::Puzzle)
perl(Bio::Tools::Run::PiseApplication::abiview)
perl(Bio::Tools::Run::PiseApplication::addquart)
perl(Bio::Tools::Run::PiseApplication::align2model)
perl(Bio::Tools::Run::PiseApplication::alistat)
perl(Bio::Tools::Run::PiseApplication::antigenic)
perl(Bio::Tools::Run::PiseApplication::assp)
perl(Bio::Tools::Run::PiseApplication::backtranseq)
perl(Bio::Tools::Run::PiseApplication::bambe)
perl(Bio::Tools::Run::PiseApplication::banana)
perl(Bio::Tools::Run::PiseApplication::bionj)
perl(Bio::Tools::Run::PiseApplication::biosed)
perl(Bio::Tools::Run::PiseApplication::bl2seq)
perl(Bio::Tools::Run::PiseApplication::blast2)
perl(Bio::Tools::Run::PiseApplication::blimps)
perl(Bio::Tools::Run::PiseApplication::blimps_block)
perl(Bio::Tools::Run::PiseApplication::blimps_matrix)
perl(Bio::Tools::Run::PiseApplication::boxshade)
perl(Bio::Tools::Run::PiseApplication::btwisted)
perl(Bio::Tools::Run::PiseApplication::cai)
perl(Bio::Tools::Run::PiseApplication::cap)
perl(Bio::Tools::Run::PiseApplication::cds)
perl(Bio::Tools::Run::PiseApplication::c
