Re: [Fink-devel] fortran and intel (again, sorry)
Martin Costabel wrote: [] I'll do a comparison with g95 soon. Still replying to myself... The first tests show g95 much faster. Half the compiling time and executables quite a bit faster. The tests I have here are now running too fast to be really significant (0.35sec vs 0.51sec isn't); I'll have to get something bigger and slower. -- Martin --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid=110944bid=241720dat=121642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
[Fink-devel] hdf5 fails to compile on intel mac
I have been attempting without success over the past few days to compile hdf5-1.6.5-1003 on an intel mac and am current stuck. I'm left with: /sw/bin/g95 -I. -O -I. -c H5fortran_types.f90 -fno-common -DPIC -o .libs/H5fort ran_types.lo In file H5fortran_types.f90:31 INTEGER, PARAMETER :: R_LARGE = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:32 INTEGER, PARAMETER :: R_INTEGER = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:33 INTEGER, PARAMETER :: HADDR_T = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:34 INTEGER, PARAMETER :: HSIZE_T = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:35 INTEGER, PARAMETER :: HSSIZE_T = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:36 INTEGER, PARAMETER :: HID_T= 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:37 INTEGER, PARAMETER :: SIZE_T = 1 Error: Expected an initialization expression at (1) In file H5fortran_types.f90:43 INTEGER(SIZE_T), PARAMETER :: OBJECT_NAMELEN_DEFAULT_F = 1 Error: Variable 'size_t' at (1) cannot appear in an initialization expression make[3]: *** [H5fortran_types.lo] Error 1 make[2]: *** [lib] Error 1 make[1]: *** [lib] Error 1 make: *** [all] Error 2 ### execution of /var/tmp/tmp.1.vapFUk failed, exit code 2 Removing build lock... /sw/bin/dpkg-lockwait -r fink-buildlock-hdf5-1.6.5-1003 (Reading database ... 57983 files and directories currently installed.) Removing fink-buildlock-hdf5-1.6.5-1003 ... Failed: phase compiling: hdf5-1.6.5-1003 failed Any suggestions? Jon C. Cline, Ph.D. Research Associate Department of Biology Case Western Reserve University Clapp Hall, Room 308 10900 Euclid Avenue Cleveland, OH 44106-7080 Email:[EMAIL PROTECTED] Phone:216-368-3561 Fax:216-368-4672 --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid=110944bid=241720dat=121642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
[Fink-devel] fink broken
hello,i hope this is the right place to ask (already tryed fink-core and fink-users)i have an ibook with macosx 10.3.9, my fink has something wrong, i don't know why it happened. when i try fink selfupdate (or whatever other fink command) i get the error reported in the attachment. any ideas?-- thanks in advance, emmanuele fink2.log Description: Binary data
Re: [Fink-devel] dpkg parse error
On 4/14/06, Robert T Wyatt [EMAIL PROTECTED] wrote: Since about April 3 I've had a problem that I haven't had time to look into until now: dpkg: parse error, in file `/sw/var/lib/dpkg/status' near line 12823: invalid package name (character `' not allowed - only letters, digits and -+._ allowed) pico +12823 /sw/var/lib/dpkg/status: Package: fink-buildlock-kgpg-3.5^N1-11 Status: purge ok not-installed Section: unknown Architecture: darwin-powerpc This is on 10.3.9 with these versions of fink present: fink_0.24.99.cvs-20060327.2110_darwin-powerpc.deb fink_0.24.99.cvs-20060329.1826_darwin-powerpc.deb fink_0.24.99.cvs-20060330.2351_darwin-powerpc.deb fink_0.24.99.cvs-20060331.0402_darwin-powerpc.deb fink_0.24.99.cvs-20060403.1310_darwin-powerpc.deb ... and this: (i) fink0.24.99.cvs-20060414.1304 The Fink package manager I expect that there is more than one way to fix this, but I would ask for guidance as to the best way to do so. Run a diff and see how far out of date /sw/var/lib/dpkg/status-old is. You might be able just to use that. Or since it's just a buildlock package, you might try removing all of the lines that refer to the broken package manually. -- Alexander K. Hansen Fink Documenter [Day Job] Levitated Dipole Experiment http://psfcwww2.psfc.mit.edu/ldx/ --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid0944bid$1720dat1642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
[Fink-devel] fink broken
hello,this is the message i sent to fink-core, i realized that i could not run fink when i tried to install xemacs-sumo-pkg. i really don't know what could i have done wrong. thank you again, emmanuele-- Forwarded message --From: Emmanuele Salvati [EMAIL PROTECTED]Date: Apr 2, 2006 12:10 PMSubject: xemacs and selfupdateTo: fink-core [EMAIL PROTECTED] hi all,i am trying to install xemacs-sumo-pkg on an ibook with macosx 10.3.9i can't, and you can see the log file in the attachment ( xemacs.log)then i try fink selfupdate, again trouble, look at the other attachment ( fink.log)any ideas? anything silly i am doing?-- thank you, emmanuele-- un abbraccio, emmanuele -- un abbraccio,emmanuele xemacs.log Description: Binary data fink.log Description: Binary data
Re: [Fink-devel] fink broken
On 4/14/06, Alexander K. Hansen [EMAIL PROTECTED] wrote: On 4/14/06, Emmanuele Salvati [EMAIL PROTECTED] wrote: hello, i hope this is the right place to ask (already tryed fink-core and fink-users) i have an ibook with macosx 10.3.9, my fink has something wrong, i don't know why it happened. when i try fink selfupdate (or whatever other fink command) i get the error reported in the attachment. any ideas? -- thanks in advance, emmanuele ./Notify/exports...# Failed test (./Notify/exports.t at line 6) # Tried to require 'Fink::Notify'. # Error: Fink/Notify.pm did not return a true value at (eval 1) line 2. # Looks like you failed 1 tests of 2. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/2 tests, 50.00% okay ./Package/duplicate_fullnames..ok ./PkgVersion/buildlocksok ./PkgVersion/get_perl..ok ./PkgVersion/get_ruby..ok ./PkgVersion/non_consecutive_sourceok ./Services/eval_conditionalok ./Services/execute_nonroot_okayok 1/12 skipped: various reasons ./Services/expand_percent..ok ./Services/prepare_script..ok ./Text/DelimMatch..ok ./users_groups.ok Failed 1/33 test scripts, 96.97% okay. 1/717 subtests failed, 99.86% okay. Failed TestStat Wstat Total Fail Failed List of Failed --- ./Notify/exports.t1 256 21 50.00% 1 2 subtests skipped. make: *** [test] Error 1 ### execution of make failed, exit code 2 Removing build lock... /sw/bin/dpkg-lockwait -r fink-buildlock-fink-0.24.14-11 ... I didn't see a message on fink-core. Was it recent? (that's probably a yet more appropriate place for this) I quoted what I think is the relevant part of your output log. I'll see if I can replicate it. And I could not, on a system which had only apps that came with the OS + updates and a fink tree. Maybe it's an interaction with a third-party app. Do you happen to have a version of Growl installed? -- Alexander K. Hansen Fink Documenter [Day Job] Levitated Dipole Experiment http://psfcwww2.psfc.mit.edu/ldx/ --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid0944bid$1720dat1642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
Re: [Fink-devel] fink broken
On 4/14/06, Emmanuele Salvati [EMAIL PROTECTED] wrote: hello, this is the message i sent to fink-core, i realized that i could not run fink when i tried to install xemacs-sumo-pkg. i really don't know what could i have done wrong. thank you again, emmanuele -- Forwarded message -- From: Emmanuele Salvati [EMAIL PROTECTED] Date: Apr 2, 2006 12:10 PM Subject: xemacs and selfupdate To: fink-core [EMAIL PROTECTED] hi all, i am trying to install xemacs-sumo-pkg on an ibook with macosx 10.3.9 i can't, and you can see the log file in the attachment ( xemacs.log) then i try fink selfupdate, again trouble, look at the other attachment ( fink.log) any ideas? anything silly i am doing? -- thank you, emmanuele -- un abbraccio, emmanuele -- un abbraccio, emmanuele Ah, now I remember it. And I even have a possible answer for your xemacs-sumo problem. Try running sudo apt-get update. -- Alexander K. Hansen Fink Documenter [Day Job] Levitated Dipole Experiment http://psfcwww2.psfc.mit.edu/ldx/ --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid0944bid$1720dat1642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
Re: [Fink-devel] fink broken
On 4/14/06, Emmanuele Salvati [EMAIL PROTECTED] wrote: hello, i hope this is the right place to ask (already tryed fink-core and fink-users) i have an ibook with macosx 10.3.9, my fink has something wrong, i don't know why it happened. when i try fink selfupdate (or whatever other fink command) i get the error reported in the attachment. any ideas? -- thanks in advance, emmanuele ./Notify/exports...# Failed test (./Notify/exports.t at line 6) # Tried to require 'Fink::Notify'. # Error: Fink/Notify.pm did not return a true value at (eval 1) line 2. # Looks like you failed 1 tests of 2. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/2 tests, 50.00% okay ./Package/duplicate_fullnames..ok ./PkgVersion/buildlocksok ./PkgVersion/get_perl..ok ./PkgVersion/get_ruby..ok ./PkgVersion/non_consecutive_sourceok ./Services/eval_conditionalok ./Services/execute_nonroot_okayok 1/12 skipped: various reasons ./Services/expand_percent..ok ./Services/prepare_script..ok ./Text/DelimMatch..ok ./users_groups.ok Failed 1/33 test scripts, 96.97% okay. 1/717 subtests failed, 99.86% okay. Failed TestStat Wstat Total Fail Failed List of Failed --- ./Notify/exports.t1 256 21 50.00% 1 2 subtests skipped. make: *** [test] Error 1 ### execution of make failed, exit code 2 Removing build lock... /sw/bin/dpkg-lockwait -r fink-buildlock-fink-0.24.14-11 ... I didn't see a message on fink-core. Was it recent? (that's probably a yet more appropriate place for this) I quoted what I think is the relevant part of your output log. I'll see if I can replicate it. -- Alexander K. Hansen Fink Documenter [Day Job] Levitated Dipole Experiment http://psfcwww2.psfc.mit.edu/ldx/ --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid0944bid$1720dat1642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
Re: [Fink-devel] hdf5 fails to compile on intel mac
Jon Cline wrote: I have been attempting without success over the past few days to compile hdf5-1.6.5-1003 on an intel mac and am current stuck. I'm left with: /sw/bin/g95 -I. -O -I. -c H5fortran_types.f90 -fno-common -DPIC -o .libs/H5fort ran_types.lo In file H5fortran_types.f90:31 INTEGER, PARAMETER :: R_LARGE = 1 Error: Expected an initialization expression at (1) [] Failed: phase compiling: hdf5-1.6.5-1003 failed Can you try the following? Edit the file hdf5.info (in /sw/fink/dists/unstable/main/finkinfo/sci/) and add the two lines cp config/powerpc-apple config/i686-apple cp fortran/config/powerpc-apple fortran/config/i686-apple to the PatchScript. It should then build. -- Martin --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid=110944bid=241720dat=121642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
[Fink-devel] Re: dpkg parse error
Alexander K. Hansen wrote: On 4/14/06, Robert T Wyatt [EMAIL PROTECTED] wrote: dpkg: parse error, in file `/sw/var/lib/dpkg/status' near line 12823: invalid package name (character `' not allowed - only letters, digits and -+._ allowed) Run a diff and see how far out of date /sw/var/lib/dpkg/status-old is. You might be able just to use that. Or since it's just a buildlock package, you might try removing all of the lines that refer to the broken package manually. -- Alexander K. Hansen Fink Documenter [Day Job] Levitated Dipole Experiment http://psfcwww2.psfc.mit.edu/ldx/ Thanks Alexander! This worked: bash-3.00$ sudo mv /sw/var/lib/dpkg/status /sw/var/lib/dpkg/status.away bash-3.00$ sudo mv /sw/var/lib/dpkg/status-old /sw/var/lib/dpkg/status bash-3.00$ fink selfupdate --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid=110944bid=241720dat=121642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
Re: [Fink-devel] hdf5 fails to compile on intel mac
Martin Costabel wrote: Jon Cline wrote: I have been attempting without success over the past few days to compile hdf5-1.6.5-1003 on an intel mac and am current stuck. I'm left with: /sw/bin/g95 -I. -O -I. -c H5fortran_types.f90 -fno-common -DPIC -o .libs/H5fort ran_types.lo In file H5fortran_types.f90:31 INTEGER, PARAMETER :: R_LARGE = 1 Error: Expected an initialization expression at (1) [] Failed: phase compiling: hdf5-1.6.5-1003 failed Can you try the following? Edit the file hdf5.info (in /sw/fink/dists/unstable/main/finkinfo/sci/) and add the two lines cp config/powerpc-apple config/i686-apple cp fortran/config/powerpc-apple fortran/config/i686-apple to the PatchScript. It should then build. This problem should be fixed in CVS (I added the latter line to the PatchScript yesterday, the former just now). -Jeff -- Jeffrey S. Whitaker Phone : (303)497-6313 Meteorologist FAX: (303)497-6449 NOAA/OAR/PSD R/PSD1Email : [EMAIL PROTECTED] 325 BroadwayOffice : Skaggs Research Cntr 1D-124 Boulder, CO, USA 80303-3328 Web: http://tinyurl.com/5telg --- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnkkid=110944bid=241720dat=121642 ___ Fink-devel mailing list Fink-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-devel
