Re: [Freesurfer] Qdec error

[ye tian]

Hello Anupa,

Did you try to open the files in their directory?

Ye


On Mon, Jul 1, 2013 at 12:23 AM, Anupa AV  wrote:

> Dear All,
>
> When I tried to running qdec, I'm getting the following error.
>
> qdec.bin: error while loading shared libraries: libjpeg.so.62: cannot open
> shared object file: No such file or directory
>
> What is the solution for this.?
>
> Any help will be greatly appreciated.
>
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[Freesurfer] Qdec error

[Anupa AV]

Dear All,

When I tried to running qdec, I'm getting the following error.

qdec.bin: error while loading shared libraries: libjpeg.so.62: cannot open 
shared object file: No such file or directory


What is the solution for this.?

Any help will be greatly appreciated.
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Re: [Freesurfer] Fwd: DTI questions

[Rotem Saar]

Dear Anastasia,

The T1 images were acquired in a sagittal orientation, and the DTI images
in an axial orientation.
Does this help ?

Thanks

Rotem

2013/6/25 Anastasia Yendiki 

>
> Hi Rotem - No problem. Were these scans by any chance acquired with a
> coronal slice prescription? In the axial views that you sent, the artifact
> that you're pointing to looks like misalignment between consecutive coronal
> slices, which could be due to head motion.
>
> a.y
>
>
> On Tue, 25 Jun 2013, Rotem Saar wrote:
>
>  Dear Anastasia,
>>
>> I tried several times to upload these images in a non-compressed way, but
>> they were too big and my posts were rejected, with no opportunity for any
>> other upload way.
>> Is there any other way for me to upload it so that everyone can see it ?
>>
>> Attached are the images in a non-compressed fashion. I will be very happy
>> if
>> u will have a look, and post your answer to me and the list to save some
>> time, until I will be able to consider another way to upload them.
>>
>> I know that we should write to all the list, but at the moment if the
>> images
>> are not visible this won't help - so I will really appreciate if u will
>> have
>> a look but also tell me what is the best way to upload them so that all
>> list
>> members will be able to see them.
>>
>> Thank u very much for your help.
>>
>> Rotem
>>
>> 2013/6/25 Anastasia Yendiki 
>>
>>   Sorry, can't open the image.
>>
>>   On Sun, 23 Jun 2013, Rotem Saar wrote:
>>
>> Hi there,
>>
>> Long time:). Well I wrote to the list several times
>> regarding high FA values
>> I got when performing DTI analysis.
>> Today we know that the problem was an additional
>> direction (we had 17
>> directions instead of 16 - we used a Philips
>> scanner,1.5T). So we deleted
>> the additional slices and the high values indeed
>> disappeared, but then
>> another problem came up (tried several subjects so
>> the problem is not
>> specific to a subject) -
>>
>> I noticed an artifact that I can't explain - please
>> see the attached
>> pictures.
>>
>> This artifact existed even before I deleted the
>> additional slices, also - I
>> see the artifact also when loading the masked
>> volume...It is cyclic - run
>> over all slices...
>>
>> any ideas ?
>>
>> I'm using version 5.2 and I know the command lines
>> are correct (send it to u
>> in the past).
>>
>> Thanks for your help
>>
>> Rotem
>>
>>
>>
>>
>> The information in this e-mail is intended only for the person to whom
>> it is
>> addressed. If you believe this e-mail was sent to you in error and the
>> e-mail
>> contains patient information, please contact the Partners Compliance
>> HelpLine at
>> http://www.partners.org/**complianceline.
>>  If the e-mail was sent to you
>> in error
>> but does not contain patient information, please contact the sender
>> and properly
>> dispose of the e-mail.
>>
>>
>>
>>
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